mRNA_M-pyrifera_M_contig108154.1734.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A7S4MNH4_9EUKA (Ras-related protein Rab n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MNH4_9EUKA) HSP 1 Score: 106 bits (264), Expect = 1.560e-26 Identity = 56/94 (59.57%), Postives = 67/94 (71.28%), Query Frame = 1 Query: 1 VLTRRQCDLA-KEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDA---RPAPQ-QKDSGCC 267 VL +CDLA KEGIC+D+RQMDKFCEE+GFIGWFETSAK +GIEDA+K LVGKILE D+ A KP + + +P P+ Q D GCC Sbjct: 138 VLLANKCDLAGKEGICQDRRQMDKFCEENGFIGWFETSAKSSVGIEDAAKCLVGKILE-DSKASQPAKDKPDSIKITKDSNKPPPRPQDDGGCC 230
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: L8HAC7_ACACA (Ras-related protein Rab n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAC7_ACACA) HSP 1 Score: 90.9 bits (224), Expect = 1.180e-20 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQKDSG---CC 267 VL +CDLAKEG + QMDK+CEEHGF GW ETSAK+++ I+ A K LV KILEND R + KK + P+ K +G CC Sbjct: 128 VLLANKCDLAKEGFARNAAQMDKYCEEHGFAGWEETSAKENINIDKAVKFLVSKILENDINRQNQLQKKDENIVKVGAGGPEPKKAGAGGCC 219
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A0D2U9Q8_CAPO3 (Ras-related protein Rab n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U9Q8_CAPO3) HSP 1 Score: 89.0 bits (219), Expect = 4.910e-20 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQK-DSGCC 267 VL +CDLAKEG+ ++ QMDKFCE+ GF GWFETSAK++L I+ A + LV KILEN T AP++ +G+ P P+Q+ GCC Sbjct: 119 VLLANKCDLAKEGLVKNSAQMDKFCEDKGFAGWFETSAKENLNIDKACRFLVTKILEN-TQSNQPAPEE-NGIIRPGGPEPKQEAKGGCC 206
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A058Z1V3_FONAL (Ras-related protein Rab n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z1V3_FONAL) HSP 1 Score: 89.0 bits (219), Expect = 5.680e-20 Identity = 43/89 (48.31%), Postives = 60/89 (67.42%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQKDSGCC 267 VL +CDL+K+G+ + QMDK+CEE GFIGWFETSAK+++ I+ A + LV KILEND + K + V +D + +P + SGCC Sbjct: 128 VLLANKCDLSKDGLVRNAAQMDKYCEEKGFIGWFETSAKENVNIDKACRALVAKILENDVSNNKRDAK--ATVVVDVKESPAES-SGCC 213
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A7M5VHE7_9CNID (Ras-related protein Rab n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5VHE7_9CNID) HSP 1 Score: 87.0 bits (214), Expect = 3.160e-19 Identity = 45/94 (47.87%), Postives = 57/94 (60.64%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAP-----QQKDSGCC 267 +L +CD KEG+ MDKFCEE GFIGW+ETSAK+++ I++ASK LV KILEND +P +D R P QQ+ SGCC Sbjct: 121 LLLANKCDQPKEGLVNKPSDMDKFCEEKGFIGWYETSAKENINIDEASKFLVQKILENDRANNLTSPDIDDD-KIDLRKKPVDVVTQQERSGCC 213
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A2G8KTW1_STIJA (Ras-related protein Rab n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KTW1_STIJA) HSP 1 Score: 85.1 bits (209), Expect = 8.680e-19 Identity = 38/90 (42.22%), Postives = 60/90 (66.67%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKK-PSGVSLDARPAPQQKDSGCC 267 VL +CD +KEG+ + QMD++C + GFIGW+ETSAK+++ I++AS+ LV ILEND G N ++ P ++LD+ + + + G C Sbjct: 90 VLLANKCDQSKEGLVNNSSQMDEYCRDKGFIGWYETSAKENINIDEASRFLVSSILENDKAAGHNEREQDPDRLALDSTESSEGRGKGSC 179
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: UPI000A2A888B (ras-related protein Rab-38 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A888B) HSP 1 Score: 85.1 bits (209), Expect = 2.380e-18 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRG-SNAPKKPSGVSL 225 VL +CD KEG+ + +QMD++C++ GFIGWFETSAK+D+ + DA+ LV KILEN+ T PK P ++L Sbjct: 125 VLLANKCDQTKEGLVNNSKQMDEYCQDKGFIGWFETSAKEDINVADAANFLVSKILENEKTHNFEGIPKDPEAITL 200
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A1X7UBZ8_AMPQE (Ras-related protein Rab n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UBZ8_AMPQE) HSP 1 Score: 83.6 bits (205), Expect = 6.480e-18 Identity = 41/89 (46.07%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQKDSGCC 267 VL +CDLA EG + Q+D +C+E GF GWFETSAK+++GI++A++ LV KILEND + AP K L ++K GCC Sbjct: 125 VLLANKCDLASEGFLGNVGQLDDYCKEKGFAGWFETSAKENIGIDEAARCLVAKILENDESIEQQAPDKDV---LHVEQETKKKSGGCC 210
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: A0A814A6W7_9BILA (Ras-related protein Rab n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814A6W7_9BILA) HSP 1 Score: 83.6 bits (205), Expect = 7.140e-18 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQKDSGCC 267 VL +CDLAKE + + QM++FC++ GF+GWFETSAKDD+ +E ASK L+ KILE + + K+ S Q+ CC Sbjct: 127 VLLANKCDLAKENLANNNEQMNEFCQDKGFVGWFETSAKDDINVEKASKFLISKILEKENAIRKDEEKQASDKLTLTNENKQENKKRCC 215
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Match: UPI001E1E1CCA (ras-related protein Rab-32-like isoform X1 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E1CCA) HSP 1 Score: 83.2 bits (204), Expect = 1.080e-17 Identity = 38/90 (42.22%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 1 VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHLVGKILENDTTRGSNAPKKPSGVSLDARPAPQQKDS-GCC 267 VL +CD KEG+ + Q+D+FC+E GFIGWFETSAK+++ I++A++ LV ++L+ND S K+ + LD +K+ GCC Sbjct: 129 VLLANKCDQPKEGLMNNTSQIDEFCKEKGFIGWFETSAKENINIDEAARFLVTQVLQNDKAMKSEDSKERDRIQLDDTDGSDKKEKRGCC 218 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108154.1734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108154.1734.1 >prot_M-pyrifera_M_contig108154.1734.1 ID=prot_M-pyrifera_M_contig108154.1734.1|Name=mRNA_M-pyrifera_M_contig108154.1734.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp VLTRRQCDLAKEGICEDKRQMDKFCEEHGFIGWFETSAKDDLGIEDASKHback to top mRNA from alignment at M-pyrifera_M_contig108154:43..312+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108154.1734.1 ID=mRNA_M-pyrifera_M_contig108154.1734.1|Name=mRNA_M-pyrifera_M_contig108154.1734.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=270bp|location=Sequence derived from alignment at M-pyrifera_M_contig108154:43..312+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108154:43..312+ >mRNA_M-pyrifera_M_contig108154.1734.1 ID=mRNA_M-pyrifera_M_contig108154.1734.1|Name=mRNA_M-pyrifera_M_contig108154.1734.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig108154:43..312+ (Macrocystis pyrifera P11B4 male)back to top |