mRNA_M-pyrifera_M_contig108152.1733.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: A0A151ZJR5_9MYCE (Protein RFT1 homolog n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZJR5_9MYCE) HSP 1 Score: 110 bits (274), Expect = 2.820e-25 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPSIGALPVQ-----VVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 GL F Y QL+ S V++ GY YF + G + TS +LLP L + + + ++WQS++KL+LTEGEKFVL +E+L++Q FSVVS+LGSL ARFLFQP+EE FS+F KL + S+ ++ ILA+++KFM +I Sbjct: 193 GLKGFGYSQLSYSLVLVIGYYGYFIIDTIRNGNNKNQENLITSLSQLLPKKTVLSHRWFDSSAIRMTMLYTWQSIQKLVLTEGEKFVLYLSESLLNQAIFSVVSALGSLAARFLFQPIEESCFSMFPKLYKATTDSD-KSKDKENVK----ILALIMKFMIIIA 351
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: D3BUS7_POLPP (Protein RFT1 homolog n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BUS7_POLPP) HSP 1 Score: 108 bits (271), Expect = 3.240e-25 Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDR-LPFTSFGELLP----SIGALPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 GL F Y Q+ S ++ GY F I + +D+ + S +LLP + + + L ++WQS++KLLLTEGEKFVL F+E L Q FSVVS+LGSL+ARF FQP+EE FS+F KL G+ ++ S + +L ML+K M +I Sbjct: 32 GLKGFGYAQIIYSLTLVIGYYGNFIITIYQDTNKQDDKSIQIRSLNQLLPKPIKNDSFISADLYKLTGLYTWQSIQKLLLTEGEKFVLYFSENLTSQAIFSVVSNLGSLIARFFFQPIEESCFSMFPKLFGESTRRQDWSDGSK-------VLTMLMKLMIIIA 188
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: A0A6B2L231_9EUKA (Protein RFT1 homolog (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L231_9EUKA) HSP 1 Score: 107 bits (267), Expect = 3.180e-24 Identity = 65/166 (39.16%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 4 QVGLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPS-IGALP----VQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 Q+ L++F GQ+ S +++ GY YF+ +I K+ + FT +L P+ +G++ + L+ F WQS +KL+L EGEK VL F E+L +QG +SVV++LGSLV RFLFQP+EEV +++FSKL +S E + +S + +L++ +K F IG Sbjct: 150 QLDLLSFGIGQIVYSLILIVGYFGYFFYKIMKRNTETQ----FTHIRQLFPTYLGSMKESFDTSSIKLLINFEWQSCQKLVLQEGEKIVLTFAESLFNQGIYSVVNNLGSLVVRFLFQPLEEVIYAVFSKL----KSYEKKDKNSSQETL--RVLSITIKLSFYIG 305
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: A0A8J4Q114_9MYCE (Protein RFT1 homolog n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q114_9MYCE) HSP 1 Score: 106 bits (264), Expect = 1.080e-23 Identity = 62/173 (35.84%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRI--------GKQGGSAEDRLPFTSFGELLPSIG-ALPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHS-----RAASSLAMCDDILAMLVKFMFLIG 486 GL F Y QL S + GY YF ++ ++ F SF ++LP+ ++ ++ L ++WQ+++KLLLTEGEK++L F+ETLV Q FSVVS+LGSL+ RFLF P+EE F +F KL + + ++ L ILA+++KF+ +I Sbjct: 197 GLKGFGYSQLFYSLSIFLGYFGYFIYKVLNTXXXXXXXXXXXXXEQFQFNSFKQILPNPSKSIDKHLLKLTGLYTWQTIQKLLLTEGEKYILYFSETLVSQAIFSVVSNLGSLIVRFLFLPIEESCFLMFPKLFPSISNSSNNNIIDKKEKEKELESGSKILAVVIKFLMIIA 369
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: UPI00064508B8 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064508B8) HSP 1 Score: 103 bits (257), Expect = 9.890e-23 Identity = 68/177 (38.42%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRI-----GKQGGSAEDRLPFTSFGELLP---SIGA------------LPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFL 480 GL F Y Q+ S V+L GY F I G + TSF +LLP SIG +V + ++WQS++KLLLTEGEK VL +++LV Q FSVVS+LGSLVARF FQP+EE F++F KL G K+ + ++ L + +++ +V F+F+ Sbjct: 204 GLKGFGYAQIIYSVVLLIGYYGNFIIGILQYDRSNMSGKFTSGVQITSFNQLLPRRPSIGTGTSKDKERDRDIFGKDLVDMTMLYTWQSIQKLLLTEGEKIVLYLSQSLVSQAIFSVVSNLGSLVARFFFQPIEETCFTMFPKLFGAKSRKDDWADSSKVLTLLMKVMS-IVAFIFI 379
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: F4PY40_CAVFA (Protein RFT1 homolog n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PY40_CAVFA) HSP 1 Score: 101 bits (251), Expect = 7.100e-22 Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 1 Query: 7 VGLMAFAYGQLAQSFVVLGGYVWYFWRRIGK----QGGSAEDRLPFTSFGELLPSIGALPVQVVT----LVATFSWQSVEKLLLTEGEKFVLKFTET-LVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 +GL F Y Q+ S V++ GY F I + +GG ++ TS +LLP + V V + + A ++WQS++KLLLTEGEK V+ LV QG FSVVS+LGSLVARF QP+EE F++F KL + + + R +L +L+K M +IG Sbjct: 217 MGLKGFGYAQVVYSVVLIVGYYGNFILSIIRSNRGKGGDTAGQVTITSVSQLLPRFSGINVLVGSELWYMTAMYTWQSIQKLLLTEGEKMVMYTNSVDLVSQGIFSVVSNLGSLVARFFLQPIEESCFAMFPKLFANRQDWDTGHR----------VLTLLMKMMIIIG 375
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: UPI001401DB87 (protein RFT1 homolog isoform X1 n=3 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001401DB87) HSP 1 Score: 94.7 bits (234), Expect = 1.240e-19 Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPSI----GALPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLV--HQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 GL F+ Q+ SF +L Y+ YF + IG + + P TS +LLP + +Q+ L TF QS+ K +LTEGE++V+ F L QG + +V++LGSLVARFLF P+EE + F+ +L R K+ + + + +L ML+K +FLIG Sbjct: 178 GLYVFSLAQILHSFTLLACYLLYFMKFIGSREAQRKS-FPLTSLTDLLPKPLPRQHVIDLQLAKLTWTFYKQSMLKQILTEGERYVMTFLNVLNFGEQGIYDIVNNLGSLVARFLFLPIEESFYIFFANVLE--RGKDPRHQREEDVGLAALVLKMLLKMVFLIG 339
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: UPI001E1D3BE3 (protein RFT1 homolog n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3BE3) HSP 1 Score: 93.2 bits (230), Expect = 4.510e-19 Identity = 64/167 (38.32%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 4 QVGLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPS----IGALPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETL--VHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 Q+GL+ FA Q+ V+ G Y YF I K G +D PF+S +LLPS + V L + QS K LLTEGEK+V+ L QG + +V++LGS+ ARF+FQP+EE + FS+LL VR + + S + D+L L+K + LIG Sbjct: 220 QLGLINFAIAQMVYGVVMSGVYYAYFIFYINKYG-KKDDSFPFSSVKQLLPSKQKDSSFVDVHQAWLTFSIFKQSFLKQLLTEGEKYVMTIFGVLSFADQGIYDIVNNLGSMAARFIFQPIEESGYLFFSQLL--VRGEPVSKQKQESCQLAVDVLGYLLKLVILIG 383
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: RFT1_DICDI (Protein RFT1 homolog n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RFT1_DICDI) HSP 1 Score: 92.0 bits (227), Expect = 1.100e-18 Identity = 54/129 (41.86%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 7 VGLMAFAYGQLAQSFVVLGGYVWYFWRRI---GKQGGSAEDRLPFTSFGELLPSIGA-LPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVHQGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKL 381 +GL+ F Y Q+ S ++ GY YF I K + E F S +L P + ++ L ++WQS+ KLLL EGEKFVL F+ET Q F++VS+LGSL+ RFLF P+EE F +F KL Sbjct: 185 MGLIGFGYAQILYSLTLVIGYFGYFLINIINNNKNKDNKEFSNCFKSIDQLFPKFSTRIDRNLIKLSLLYTWQSIYKLLLQEGEKFVLFFSETNQGQAIFAIVSNLGSLIVRFLFLPIEETCFLMFPKL 313
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Match: UPI0018F74847 (protein RFT1 homolog n=1 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F74847) HSP 1 Score: 90.5 bits (223), Expect = 3.720e-18 Identity = 62/165 (37.58%), Postives = 90/165 (54.55%), Query Frame = 1 Query: 10 GLMAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPSI----GALPVQVVTLVATFSWQSVEKLLLTEGEKFVLKFTETLVH--QGSFSVVSSLGSLVARFLFQPVEEVSFSLFSKLLGDVRSKEGHSRAASSLAMCDDILAMLVKFMFLIG 486 GL F+ QL S +L YV YF + +G Q + P ++ G+L+P L ++ L TF QS K +LTEGE++V+ F L QG + +V++LGSLVARFLF P+EE + F K+L R K+ + ++M +L MLVK + LIG Sbjct: 164 GLCIFSLAQLLYSSCLLACYVLYFVKFVGSQEAQRKS-FPISTLGDLMPKFLCHQHVLNPRLAILTWTFYKQSFLKQVLTEGERYVMTFLNVLNFGDQGVYDIVNNLGSLVARFLFLPIEESFYVFFVKVLE--RGKDIGHQKREDVSMAATVLEMLVKLVLLIG 325 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108152.1733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108152.1733.1 >prot_M-pyrifera_M_contig108152.1733.1 ID=prot_M-pyrifera_M_contig108152.1733.1|Name=mRNA_M-pyrifera_M_contig108152.1733.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp MAFAYGQLAQSFVVLGGYVWYFWRRIGKQGGSAEDRLPFTSFGELLPSIGback to top mRNA from alignment at M-pyrifera_M_contig108152:13..547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108152.1733.1 ID=mRNA_M-pyrifera_M_contig108152.1733.1|Name=mRNA_M-pyrifera_M_contig108152.1733.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=535bp|location=Sequence derived from alignment at M-pyrifera_M_contig108152:13..547+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108152:13..547+ >mRNA_M-pyrifera_M_contig108152.1733.1 ID=mRNA_M-pyrifera_M_contig108152.1733.1|Name=mRNA_M-pyrifera_M_contig108152.1733.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=942bp|location=Sequence derived from alignment at M-pyrifera_M_contig108152:13..547+ (Macrocystis pyrifera P11B4 male)back to top |