mRNA_M-pyrifera_M_contig108141.1729.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A507CE32_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CE32_9FUNG) HSP 1 Score: 144 bits (362), Expect = 4.350e-36 Identity = 84/207 (40.58%), Postives = 131/207 (63.29%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSGK---KLVTLSDLNKGMKVKGTVRRVE 612 GR+ ++ G ++Q+ + GRV LTDIAD ++ K L A+K GQ + C V+ +D AQ RLDLSLRPSR++ V E++E+ + EV+ + ++++ ++V G++ S +G FVAIS + ARV +S LSD +VKD Y G LVKGR+ ++ +G +EM+LK S+V G K ++LSDL KG K++GTV+ ++ Sbjct: 1300 GRIGQISPATGYQIQLGQNIVGRVYLTDIADTYSRKTLKAYKVGQIVRCCVIDIDAAQRRLDLSLRPSRLAV-VPEQDEDYNV-----EVQSIDDIKQDTVVSGFIKNISE-------NGCFVAISHKLVARVKISGLSDAFVKDWKALYSIGQLVKGRILSVNSATGQIEMTLKASIVDGTAPAKALSLSDLVKGQKLRGTVKAIK 1493
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: L1JFG5_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JFG5_GUITC) HSP 1 Score: 130 bits (327), Expect = 2.100e-31 Identity = 90/205 (43.90%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 4 RVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEE--REITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSGKKLVTLSDLNKGMKVKGTVRRVE 612 ++ K G G +++ H++GRV + DIAD PL+ FK GQ + C VL + + LSLRPSRVS EEEE RE PEV V EL G ++ GYV S S+GVFV + R VTARV +SELSD YVKD + G V GRV ++ K V++SLK SVV GK+ V SDL G V G V+ V+ Sbjct: 1278 KIVKARPGFGFVLKLGLHSFGRVHICDIADAAVDAPLSLFKVGQLVRCCVLEAE--EDGFALSLRPSRVSGKRRGEEEEAVREHGAF-PEVSSVKELAVGQLLSGYVKSAS-------SAGVFVQLGRQVTARVKISELSDGYVKDVKANFPPGRRVSGRVISVEVKKEQVDLSLKRSVVLGKRRVGWSDLQVGQVVAGAVKSVQ 1472
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A1Y2H2N0_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2H2N0_9FUNG) HSP 1 Score: 127 bits (320), Expect = 1.840e-30 Identity = 83/208 (39.90%), Postives = 125/208 (60.10%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKF--TSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVV--SGKKLVTLSDLNKGMKVKGTVRRVE 612 GRV + + GL + + +GRV LT I+D + + K L FK+GQ L C+VLSVD++ ++DLSLR SR+SP E V DPEV+ ++ G I++G+V SN KG +FVA+S ++ RV ++ELSDDY+KD + G LVK +V +++ +E++LK S + S K TL+D KG K+KGT++ V+ Sbjct: 1085 GRVGGI-QHAGLDIHLGGKVFGRVHLTHISDVYADSDKLLGGFKKGQILKCFVLSVDSSNKKIDLSLRHSRLSP-------EEHSPVHDPEVKGFADMAAGGILQGFV---SNVADKG----LFVALSPKLSGRVKIAELSDDYLKDWKSNFTVGQLVKAKVVSLNEDRNQIELTLKASQIDPSFKAAQTLADFTKGQKIKGTIKAVK 1277
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A507E105_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E105_9FUNG) HSP 1 Score: 124 bits (312), Expect = 2.190e-29 Identity = 77/207 (37.20%), Postives = 119/207 (57.49%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVS---GKKLVTLSDLNKGMKVKGTVRRVE 612 GR+ K+ G+GL +Q++ +GRV LTD++D + P+ + G + C VLS D + +LDLSLR SRV AE V + EV+ + ++ ++V GY+ S+ G FV +SRN++ARV +SELSD ++K ++ G LV+GRV ++ G +EMSLK SVV + ++ KG KVKGTV+ ++ Sbjct: 1326 GRIKKIEAGKGLVIQISPSMHGRVYLTDLSDAYEKDPITNYHVGNVVQCCVLSFDAEKHQLDLSLRDSRVKQTSAE--------VPNVEVKSIEDVVVDTVVSGYIRNVSDVGC-------FVGLSRNLSARVKISELSDAFIKQWKDAFQPGQLVQGRVVSVNSDQGRIEMSLKQSVVDPDVNGLQIKWDNIEKGQKVKGTVKAIK 1517
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A3N4IDR0_ASCIM (Nucleic acid-binding protein n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IDR0_ASCIM) HSP 1 Score: 124 bits (311), Expect = 2.960e-29 Identity = 76/205 (37.07%), Postives = 122/205 (59.51%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSG--KKLVTLSDLNKGMKVKGTVRRV 609 GRV KV + + + VQ++ G + LT+IAD + L+ F GQ + V+ +D R+ LS+RPSRV + + V DPE++ + +++ G + +G++ S+KG VFVA+ NV A V VS+LSD ++K+ Y+ LV+G++T ++ GHV+MSLKHSV+ G K +TL++L KGM+V G V+ + Sbjct: 1142 GRVTKVTDRQ-VYVQISEAISGVIELTNIADNYNEVKLSKFDRGQIIRVCVIDLDVNNKRVTLSMRPSRVM--------DNKAKVEDPEIQTIAQVQVGDVRRGFIRNVSDKG-------VFVALGGNVVAFVRVSDLSDQFIKEWKQAYRVDQLVRGKITAVESALGHVQMSLKHSVIEGALKPELTLNNLKKGMEVDGYVKAI 1330
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A139AYG6_GONPJ (Nucleic acid-binding protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AYG6_GONPJ) HSP 1 Score: 122 bits (307), Expect = 1.030e-28 Identity = 83/214 (38.79%), Postives = 119/214 (55.61%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAA--HTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRL--DLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVS------GKKLVTLSDLNKGMKVKGTVRRVE 612 GRV V E + + V + +GR +TD++D+F S P + G ++ C +LSV GR D+SLRPS++ V+E+ V DPE + V L G++V+GYV ++ SG FV++ RN++ RV + E+SDDYVKD K G LV+ V ID VE++LK SVV+ KK + L KGMK+ GTVR+VE Sbjct: 1446 GRVLSVDENKAVNVILGGGKKLFGRAFVTDLSDRFESNPTKKYSVGAYVACRILSVTERDGRTFADVSLRPSQILKKVSEK-------VEDPEFDSVASLSVGAVVRGYVKNVTD-------SGCFVSLGRNLSGRVKIKEMSDDYVKDWKGLVKIGQLVRAEVIGIDTDRNQVELTLKQSVVNPEGYKKAKKKLDWEGLTKGMKLDGTVRKVE 1645
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A1U7LW81_NEOID (rRNA biogenesis protein rrp5 n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LW81_NEOID) HSP 1 Score: 116 bits (290), Expect = 1.900e-26 Identity = 82/207 (39.61%), Postives = 123/207 (59.42%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVS---GKKLVTLSDLNKGMKVKGTVRRVE 612 GRV K+ E +G+ VQ++ GRV LTD++D F+S A FK GQ VL VD A ++ LS R SRV ++ VVD E+ + +L+ G +V+G++ ++KG +F+++SRNVTARV +SE+SDDY+KD +K L++G++ +D S VEMSLK+S + G +L ++ G V GTVR+VE Sbjct: 1080 GRVTKISE-QGMMVQLSESIIGRVFLTDMSDDFSSG--AQFKNGQIARFCVLDVDQANRKIALSARASRVLSSSSK--------VVDLEILSMDDLKIGQVVRGFIKNIADKG-------LFISLSRNVTARVKISEISDDYIKDWKKLFKPMQLIQGKIINLDSNSKQVEMSLKNSAMGTDLGPRL-GFTEYKIGQIVDGTVRKVE 1267
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A8B8M8V8_ABRPR (rRNA biogenesis protein RRP5 n=1 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8M8V8_ABRPR) HSP 1 Score: 116 bits (290), Expect = 1.920e-26 Identity = 82/213 (38.50%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 1 GRVAKVVEGEG-LRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVD-TAQGRL--DLSLRPSRV--SPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSGKKLVTLSDLNK---GMKVKGTVRRVE 612 GRV+KV+ G G L VQ+ H YGRV T+++D + PL+ + EGQF+ C VL V T +G + DLSLR S + S A+ ++ VE + +L IVKGYV + KG F+ +SR + A++ +S LSD+YVKDP + G LV GRV ++ S VE++LK S +S + + DL K G + G ++RVE Sbjct: 1258 GRVSKVLPGVGGLLVQIGPHAYGRVHFTELSDTWVPDPLSGYHEGQFVKCVVLEVSHTVKGTIHVDLSLRSSNIMLSQNSADHLDKFVSNAKGKCVEKIDDLHPDMIVKGYVKNVTPKGC-------FIFLSRKIDAKILLSNLSDNYVKDPEKEFPVGKLVIGRVKSVESLSNRVEVTLKTSAISNRPKSEIIDLTKFHVGDVISGKIKRVE 1463
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A7S0Z871_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z871_9CHLO) HSP 1 Score: 115 bits (289), Expect = 2.620e-26 Identity = 72/204 (35.29%), Postives = 112/204 (54.90%), Query Frame = 1 Query: 1 GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSGKKLVTLSDLNKGMKVKGTVRRVE 612 G V ++++ GL VQ+ +H+ GRV +TDIADK+ S P A ++ GQ + V++V G +DLS+R S++S + V D E+ D+ L G V+GYV S KG F+ +SRN+ A +S L+D++V DP +++ G LV GR+ D G VE+S + + +S + G + GTVRRV+ Sbjct: 1238 GIVTRIIDNVGLMVQLGSHSSGRVHITDIADKYESNPCAGYRTGQVVQVRVINVSPG-GEIDLSMRDSQLS--------NKSGKVTDSEIHDIASLVPGQSVRGYVKATSKKGC-------FITLSRNIDAMCKLSNLADEFVADPVISFPPGKLVSGRIVGADAAKGRVEVSFREREANQGN-TDVSAVEVGSVIMGTVRRVQ 1424
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Match: A0A1E3JKV4_9TREE (rRNA biogenesis protein RRP5 n=3 Tax=Cryptococcus TaxID=5206 RepID=A0A1E3JKV4_9TREE) HSP 1 Score: 114 bits (286), Expect = 6.440e-26 Identity = 80/201 (39.80%), Postives = 115/201 (57.21%), Query Frame = 1 Query: 31 GLRVQVAAHTYGRVVLTDIADKFT----SKPLAAFKEGQFLYCYVLSVDTAQGRLDLSLRPSRVSPPVAEEEEEREITVVDPEVEDVGELEEGSIVKGYVLPGSNKGSKGKSSGVFVAISRNVTARVFVSELSDDYVKDPSVTYKAGTLVKGRVTKIDQKSGHVEMSLKHSVVSGKK---LVTLSDLNKGMKVKGTVRRVE 612 G V+++ GRV D AD + KPL+ G+ + CYVL VD ++ +DLS RPSRV E + VVD E+ VG+L+EGS V+G V K G SGVFV++ RNVTAR+ + EL D+YVKD ++ G LV G++ I+ + +E+SL+ S K L++LSD +G KV +V++VE Sbjct: 811 GWMVKISHSIRGRVHPCDAADDLSLVTAQKPLSV---GKHVKCYVLKVDASKRAIDLSTRPSRV---------EGKEDVVDKEISTVGDLKEGSTVRGLV-----KNIAG--SGVFVSLGRNVTARIMIKELFDEYVKDWQSRFEVGQLVSGKIVSINSNTNSIELSLRKSPTRAAKKTALLSLSDFTEGQKVVASVKKVE 992 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108141.1729.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108141.1729.1 >prot_M-pyrifera_M_contig108141.1729.1 ID=prot_M-pyrifera_M_contig108141.1729.1|Name=mRNA_M-pyrifera_M_contig108141.1729.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp GRVAKVVEGEGLRVQVAAHTYGRVVLTDIADKFTSKPLAAFKEGQFLYCYback to top mRNA from alignment at M-pyrifera_M_contig108141:4..615+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108141.1729.1 ID=mRNA_M-pyrifera_M_contig108141.1729.1|Name=mRNA_M-pyrifera_M_contig108141.1729.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig108141:4..615+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108141:4..615+ >mRNA_M-pyrifera_M_contig108141.1729.1 ID=mRNA_M-pyrifera_M_contig108141.1729.1|Name=mRNA_M-pyrifera_M_contig108141.1729.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig108141:4..615+ (Macrocystis pyrifera P11B4 male)back to top |