mRNA_M-pyrifera_M_contig10812.1724.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: D8LBM5_ECTSI (Similar to 20S proteasome alpha5 subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBM5_ECTSI) HSP 1 Score: 371 bits (953), Expect = 1.190e-123 Identity = 206/291 (70.79%), Postives = 229/291 (78.69%), Query Frame = 1 Query: 19 RRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDV-HMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQ----GGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVLGDD-FCVDRLEMVCVDNL---REDDDEEELDESIQGPGRKH-------RRNISRSADGQARGPP 843 RRKAPVREKKAYDTSVRAFSPDGSIYQVEYAV+AA KGGLTIGVQTD+GLVLAA GRRRSPLLK+SSV KI D+D M CAMSGLLPDG LL+D+AR WVQEHRFEFDEAPSVEAVA+QLSR+ALKFNGYD G+ G GG + GG AMSRPVGVALLMAG+D G RPVLYHLDPSGAYVQWRARAIG+K +AAEAKLE GP++GM+VRRAMA VL VL++VLGDD F DRLEMVCVD + R D + + PG +H N+ DG GPP Sbjct: 25 RRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVEAADKGGLTIGVQTDKGLVLAAHGRRRSPLLKASSVSKIADVDDGRMCCAMSGLLPDGRLLLDYARTWVQEHRFEFDEAPSVEAVASQLSRLALKFNGYDKDGKAGNGGREEEDGGGPAMSRPVGVALLMAGVDRGDRPVLYHLDPSGAYVQWRARAIGDKGAAAEAKLEGVGPFEGMSVRRAMAAVLGVLREVLGDDEFSTDRLEMVCVDMMGGGRGSGDGGGGERGVCSPGAEHGATSASDHDNVGGGGDGAISGPP 315
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A1Y2BW89_9BASI (Proteasome subunit alpha type (Fragment) n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2BW89_9BASI) HSP 1 Score: 184 bits (468), Expect = 4.710e-53 Identity = 99/211 (46.92%), Postives = 137/211 (64.93%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD SV +FSP+G ++QVEYA++A + G T+G+QT QG+VLA + R +SPLL S SV KI++ID H+ CAMSGL D +V+HAR Q H F +DE VE+V + +AL+F GEG ++ +MSRP GVALL+AG D G P LYH DPSG ++++ A+AIG S A+ +L+ + K MT+ A L+VLK V+ Sbjct: 7 YDRSVSSFSPEGRLFQVEYAIEAIKLGSTTVGIQTSQGVVLAVEKRTQSPLLDSDSVEKIMEIDSHVACAMSGLTADARTMVEHARVTSQNHSFTYDEPIKVESVTQAVCDLALRF---------GEGADEEEASMSRPFGVALLIAGYDQSGGPQLYHADPSGTFMRYDAKAIGSGSEGAQNELQDSY-NKSMTLEEAQVLALKVLKQVM 207
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A1D1XX99_9ARAE (Proteasome subunit alpha type (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XX99_9ARAE) HSP 1 Score: 184 bits (466), Expect = 1.020e-52 Identity = 105/226 (46.46%), Postives = 143/226 (63.27%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPY-KGMTVRRAMATVLRVLKDVLGDDFCVDRLEMVCV 726 YD V FSP+G ++QVEYA++A + G +G+QT +G+VLAA+ R SPLL SSS+ KI++ID H+ CAMSGL D ++DHAR Q HRF +DEA VE+V + +AL+F G A GE+ MSRP GVALL+AG+D G P L+H DPSG + Q+ A+AIG S A+ +LE G Y K +T+ +A LRVLK V+ + +E+ V Sbjct: 13 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGIQTSEGVVLAAEKRVTSPLLVSSSIEKIMEIDKHLGCAMSGLTADSRTMIDHARVAAQSHRFTYDEAIKVESVTQAVCDLALRF-GESAEGEES--------IMSRPFGVALLIAGVDENG-PQLFHADPSGTFTQFDAKAIGSGSEGAQTELE--GEYHKSITLEKAETLSLRVLKQVMEEKLNNTNVELASV 226
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A7S0S1S4_9CHLO (Proteasome subunit alpha type n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1S4_9CHLO) HSP 1 Score: 183 bits (465), Expect = 1.240e-52 Identity = 104/211 (49.29%), Postives = 138/211 (65.40%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD V FSP+G I+QVEYA++A + G IGV T +G+VLA + R SPLL+ SS+ KI++ID HM CAMSGL D +LVDHARA Q+HRF ++EA VEA L +AL+F GEG ++G AMSRP GVALL+AG D G P+LYH DPSG Y ++ A+AIG + A++ L++ G K +T++ A L LK V+ Sbjct: 12 YDRGVNTFSPEGRIFQVEYAIEAIKLGSTAIGVTTPEGVVLAVEKRITSPLLEPSSIEKILEIDEHMGCAMSGLTADAKMLVDHARAETQQHRFTYNEAMPVEACTQSLCDLALRF---------GEGDDEG--AMSRPFGVALLIAGWDDQG-PLLYHTDPSGTYTKYAAKAIGSGAEGAQSTLQE-GFRKDLTLKEAEVLALSTLKQVM 209
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A1X6NLH8_PORUM (Proteasome subunit alpha type n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLH8_PORUM) HSP 1 Score: 183 bits (465), Expect = 1.360e-52 Identity = 100/225 (44.44%), Postives = 138/225 (61.33%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVLGDDFCVDRLEMVCV 726 YD V FSP+G ++QVEYA++A + G +G+ T +G++LA + R SPLL SS+ K+++ID H+ AMSGL D L+DH R QEHRF +DE SVE+ L +AL+F GE G + G AM+RP GVALL+AG+D G P LYH DPSG YV+W A+AIG S A+ L++A GMT+ A L+ LK V+ + + +E+ V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAVGICTTEGVILAVEKRLTSPLLTPSSIEKVLEIDTHIGAAMSGLTADARTLIDHGRIVTQEHRFTYDEPLSVESTTQSLCDLALRF------GEDGR--DDGADAMARPFGVALLIAGVDDEGGPALYHTDPSGTYVKWMAKAIGAGSEGAQTALQEAWSA-GMTLAEAEGLALKTLKAVMEEKVSGENVEVAAV 223
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: UPI001C7A0D83 (proteasome component pup2 n=1 Tax=Marasmius oreades TaxID=181124 RepID=UPI001C7A0D83) HSP 1 Score: 183 bits (464), Expect = 1.750e-52 Identity = 99/211 (46.92%), Postives = 140/211 (66.35%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD V FSP+G ++QVEYA++A + G T+G++TDQG+VLA + R +SPL++SSS+ KI++ID H+ CAMSGL D ++DHAR Q H F +DE VE+V + +AL+F GE + MSRP GVALL+AG+D G P LYH DPSG +V+++A+AIG S AA+A+L++ Y MT++ A +RVLK V+ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTLGIRTDQGVVLAVEKRVQSPLIESSSIEKIMEIDRHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF---------GESVHDEDAMMSRPFGVALLIAGIDEVG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQEKW-YSQMTLQEANILAMRVLKQVM 207
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: M7XIX9_RHOT1 (Proteasome subunit alpha type n=6 Tax=Rhodotorula TaxID=5533 RepID=M7XIX9_RHOT1) HSP 1 Score: 182 bits (463), Expect = 2.620e-52 Identity = 98/211 (46.45%), Postives = 140/211 (66.35%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD V FSP+G ++QVEYA++A + G T+G+QT +G+VLA + R +SPLL+S SV KI++ID H+ CAMSGL D +V+HAR Q H F +DE VE+V +S +AL+F GEG N+ +MSRP GVALL+AG+D G P L+H DPSG ++++ A+AIG S A+++L+ + K MT+ +A L+VLK V+ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGIQTSEGVVLAVEKRTQSPLLESDSVEKIMEIDRHIGCAMSGLTADARTMVEHARVTAQNHVFTYDEPIKVESVTQSVSDLALRF---------GEGANEEDASMSRPFGVALLIAGIDHHG-PQLFHADPSGTFMRYHAKAIGSGSEGAQSELQDSYD-KSMTLAQAKVLALKVLKQVM 207
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A1Q3E886_LENED (Proteasome subunit alpha type n=4 Tax=Omphalotaceae TaxID=72117 RepID=A0A1Q3E886_LENED) HSP 1 Score: 182 bits (462), Expect = 6.660e-52 Identity = 99/211 (46.92%), Postives = 138/211 (65.40%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD V FSP+G ++QVEYA++A + G T+GV+TD+G+VL + R +SPL++SSS+ KI++ID H+ CAMSGL D ++DHAR Q H F +DE VE+V + +AL+F GE + MSRP GVALL+AG+D G P LYH DPSG +V+++A+AIG S AA+A+L+ K MT+R A LR+LK V+ Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTTVGVRTDEGVVLGVEKRVQSPLIESSSIEKIMEIDAHLGCAMSGLTADARTMIDHARVTAQNHSFTYDEKIKVESVTQAVCDLALRF---------GESVHDEDAMMSRPFGVALLIAGIDELG-PQLYHTDPSGTFVRYQAKAIGSGSEAAQAELQDKWHSK-MTLREAQLLTLRILKQVM 207
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: E9HGR7_DAPPU (Proteasome subunit alpha type n=8 Tax=Mandibulata TaxID=197563 RepID=E9HGR7_DAPPU) HSP 1 Score: 181 bits (458), Expect = 1.380e-51 Identity = 100/225 (44.44%), Postives = 144/225 (64.00%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVLGDDFCVDRLEMVCV 726 YD V FSP+G ++QVEYA++A + G IG+QT +G+VLA + R SPL++ +++ KIV+ID H+ CA+SGL+ D +VD AR Q H F +DE SVE+VA +S +A++F G+ + GN AMSRP GVA+L AG+D G P L+H+DPSG YVQ+ A+AIG S A+ L++A K MT++ AM L +LK V+ + +E+ V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVEKRITSPLMEPTTIEKIVEIDKHIGCAVSGLMADSRTMVDRARVEAQNHWFTYDEKMSVESVAQAVSNLAIQF------GDSDDDGN----AMSRPFGVAILFAGIDEKG-PQLFHMDPSGTYVQYDAKAIGSGSEGAQQSLQEAY-NKSMTLKSAMKAALTILKQVMEEKLSSTNVEVAAV 220
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Match: A0A5J4Z0C5_PORPP (Proteasome subunit alpha type n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0C5_PORPP) HSP 1 Score: 180 bits (457), Expect = 2.390e-51 Identity = 99/211 (46.92%), Postives = 135/211 (63.98%), Query Frame = 1 Query: 52 YDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVQTDQGLVLAAQGRRRSPLLKSSSVCKIVDIDVHMFCAMSGLLPDGHLLVDHARAWVQEHRFEFDEAPSVEAVAAQLSRMALKFNGYDAPGEQGEGGNQGGLAMSRPVGVALLMAGMDCGGRPVLYHLDPSGAYVQWRARAIGEKSSAAEAKLEKAGPYKGMTVRRAMATVLRVLKDVL 684 YD V FSP+G ++QVEYA++A + G IG++T+QG+VLA + R SPLL+ SV K+V ID + CAMSGL D L+DHAR Q HRF +DE +++ A + +AL+F GE G+ + AMSRP GVALL+AG+D GG+P L H DPSG YV+W A+AIG S A+ L++A K +T++ A LR LK V+ Sbjct: 14 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIKTEQGVVLAVEKRLTSPLLEPRSVEKLVVIDSQIGCAMSGLTADARTLIDHARVETQSHRFTYDEPMQIDSCAQAICDLALQF------GEDGKEED----AMSRPFGVALLIAGIDVGGKPSLIHTDPSGTYVKWDAKAIGAGSEGAQTALQEAFS-KTLTLQEAEVLALRTLKQVM 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10812.1724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10812.1724.1 >prot_M-pyrifera_M_contig10812.1724.1 ID=prot_M-pyrifera_M_contig10812.1724.1|Name=mRNA_M-pyrifera_M_contig10812.1724.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=360bp MYSHNRRRKAPVREKKAYDTSVRAFSPDGSIYQVEYAVQAAQKGGLTIGVback to top mRNA from alignment at M-pyrifera_M_contig10812:459..3386- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10812.1724.1 ID=mRNA_M-pyrifera_M_contig10812.1724.1|Name=mRNA_M-pyrifera_M_contig10812.1724.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2928bp|location=Sequence derived from alignment at M-pyrifera_M_contig10812:459..3386- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10812:459..3386- >mRNA_M-pyrifera_M_contig10812.1724.1 ID=mRNA_M-pyrifera_M_contig10812.1724.1|Name=mRNA_M-pyrifera_M_contig10812.1724.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2160bp|location=Sequence derived from alignment at M-pyrifera_M_contig10812:459..3386- (Macrocystis pyrifera P11B4 male)back to top |