mRNA_M-pyrifera_M_contig108061.1718.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A517WGX7_9PLAN (Outer membrane efflux protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517WGX7_9PLAN) HSP 1 Score: 379 bits (972), Expect = 1.800e-125 Identity = 201/204 (98.53%), Postives = 204/204 (100.00%), Query Frame = 1 Query: 1 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAA+VRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAW+DQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAF+TAQ Sbjct: 445 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAARVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWLDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFITAQ 648
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A518AAC6_9PLAN (Outer membrane efflux protein n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AAC6_9PLAN) HSP 1 Score: 348 bits (894), Expect = 8.070e-114 Identity = 182/204 (89.22%), Postives = 198/204 (97.06%), Query Frame = 1 Query: 1 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +LELIS+QQP+D S+PVTIEDAMATALEYRSEVDIASREIEAA+VRLGVA NDLLPKLDLVLE+YLSGLKG+FD+SRAW+DQFS+GEPSYTAGLVFEVPLYRQEARSRHLQR+VELRRLLSRF+LTV NLRAEVETAVR VRTANRNLQSQYQAMIAA ADVEFLQRRWEM PGLDR+SSFLLEDLID+QDRRA+AE+AFVTAQ Sbjct: 441 DLELISVQQPLDVSIPVTIEDAMATALEYRSEVDIASREIEAARVRLGVASNDLLPKLDLVLESYLSGLKGDFDISRAWIDQFSLGEPSYTAGLVFEVPLYRQEARSRHLQRTVELRRLLSRFDLTVNNLRAEVETAVRYVRTANRNLQSQYQAMIAAHADVEFLQRRWEMLPGLDRSSSFLLEDLIDAQDRRADAERAFVTAQ 644
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A3C0ARL3_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0ARL3_9PLAN) HSP 1 Score: 319 bits (818), Expect = 6.400e-107 Identity = 164/204 (80.39%), Postives = 192/204 (94.12%), Query Frame = 1 Query: 1 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +LELISIQQP D +PVT+EDAMATA+EYRSEVDIAS+EI+AA+VRLGVACNDLLPKLDLVLETYL+GLKG+F++S+AWVDQFSVGEPSYTAG VFEVPL+RQ+A+S+HLQR+VELRRLL++FELTV+NLRAEVETAVR V TA+RNL+SQY ++ AA AD E+L+RRWEM PG DR+SSFLLEDLID+QDRRAEAEQAFVTAQ Sbjct: 78 HLELISIQQPNDLRIPVTVEDAMATAMEYRSEVDIASQEIQAARVRLGVACNDLLPKLDLVLETYLTGLKGDFNISQAWVDQFSVGEPSYTAGFVFEVPLWRQQAKSQHLQRTVELRRLLNKFELTVDNLRAEVETAVRYVETADRNLRSQYHSLQAANADAEYLKRRWEMLPGHDRSSSFLLEDLIDAQDRRAEAEQAFVTAQ 281
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A2E2CAL0_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2CAL0_9PLAN) HSP 1 Score: 319 bits (818), Expect = 9.080e-103 Identity = 164/204 (80.39%), Postives = 192/204 (94.12%), Query Frame = 1 Query: 1 NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +LELISIQQP D +PVT+EDAMATA+EYRSEVDIAS+EI+AA+VRLGVACNDLLPKLDLVLETYL+GLKG+F++S+AWVDQFSVGEPSYTAG VFEVPL+RQ+A+S+HLQR+VELRRLL++FELTV+NLRAEVETAVR V TA+RNL+SQY ++ AA AD E+L+RRWEM PG DR+SSFLLEDLID+QDRRAEAEQAFVTAQ Sbjct: 408 HLELISIQQPNDLRIPVTVEDAMATAMEYRSEVDIASQEIQAARVRLGVACNDLLPKLDLVLETYLTGLKGDFNISQAWVDQFSVGEPSYTAGFVFEVPLWRQQAKSQHLQRTVELRRLLNKFELTVDNLRAEVETAVRYVETADRNLRSQYHSLQAANADAEYLKRRWEMLPGHDRSSSFLLEDLIDAQDRRAEAEQAFVTAQ 611
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A355G8Y8_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G8Y8_9PLAN) HSP 1 Score: 251 bits (640), Expect = 1.190e-81 Identity = 127/158 (80.38%), Postives = 149/158 (94.30%), Query Frame = 1 Query: 139 LGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +GVACNDLLPKLDLVLETYL+GLKG+F++S+AWVDQFSVGEPSYTAG VFEVPL+RQ+A+S+HLQR+VELRRLL++FELTV+NLRAEVETAVR V TA+RNL+SQY ++ AA AD E+L+RRWEM PG DR+SSFLLEDLID+QDRRAEAEQAFVTAQ Sbjct: 1 MGVACNDLLPKLDLVLETYLTGLKGDFNISQAWVDQFSVGEPSYTAGFVFEVPLWRQQAKSQHLQRTVELRRLLNKFELTVDNLRAEVETAVRYVETADRNLRSQYHSLQAANADAEYLKRRWEMLPGHDRSSSFLLEDLIDAQDRRAEAEQAFVTAQ 158
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A2D5S8X7_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5S8X7_9PLAN) HSP 1 Score: 190 bits (482), Expect = 3.990e-57 Identity = 95/174 (54.60%), Postives = 134/174 (77.01%), Query Frame = 1 Query: 91 SEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 S +D A++EIEAA++RL +A N+LLP LD VLETY+S L+G++++ R+++DQFSVG+PS+TAG +FE P++R+ AR+ HL+R VELR+L +RF+ T+E L A+VE AVR ++Y +M+A +AD ++LQRRWE PG DRA+SF+LEDL+DSQDR A AE F AQ Sbjct: 11 SPIDAAAQEIEAARIRLDMARNELLPVLDAVLETYVSELRGDYNIGRSFIDQFSVGQPSFTAGFIFEAPIHRRSARANHLRRQVELRQLSNRFQATIETLNADVEVAVRXXXXXXXXXXAKYLSMVATQADAQYLQRRWEFLPGDDRAASFMLEDLLDSQDRLAAAEFHFTQAQ 184
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A518E4M0_9BACT (Outer membrane efflux protein n=1 Tax=Lignipirellula cremea TaxID=2528010 RepID=A0A518E4M0_9BACT) HSP 1 Score: 196 bits (497), Expect = 1.980e-55 Identity = 100/190 (52.63%), Postives = 142/190 (74.74%), Query Frame = 1 Query: 7 ELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDR 576 EL+ ++ PI N +PV++++A+ ALE R E++ A++EI+AA+VRL VA N+L+P LDLVLETY+SGL+G++++ R+W DQF+VGEPSYTAGLVFEVP R+ A++ +R +ELR+L SR ++ +E L A+VE AV +M AA++DV +LQRRWE PG DRA+SFLL DL+D+QDR Sbjct: 426 ELVPVEPPIHNFIPVSMDEAIYLALENRPEINTATKEIQAARVRLNVAENELMPVLDLVLETYVSGLRGQYNVGRSWADQFAVGEPSYTAGLVFEVPYQRRAAKANFQRRQIELRQLSSRLQVAIETLHADVEVAVXXXXXXXXXXXXXXVSMAAADSDVCYLQRRWEELPGDDRAASFLLADLLDAQDR 615
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A2A2WIH1_9BACT (Uncharacterized protein n=3 Tax=Planctomycetes TaxID=203682 RepID=A0A2A2WIH1_9BACT) HSP 1 Score: 193 bits (490), Expect = 1.260e-54 Identity = 104/203 (51.23%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 4 LELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +E+I + P +PV++EDA+ TAL+ RSE++ +RE++ A+VRL VA N+LLP LDLVLETY SGL+G D+ RAW+DQFSVGEPSY+AGL FEVPL R+ A++ L+R ELR+L SR T+ L AEV AVR+V T++R L ++Y AM++A+ V+ + RW PG +++ LLEDL+D+QDR E F AQ Sbjct: 410 VEIIPARPPSLALVPVSLEDAVVTALQQRSEMNEVARELDTARVRLNVAQNELLPMLDLVLETYFSGLRGSQDIGRAWIDQFSVGEPSYSAGLRFEVPLQRRAAKANILRRQAELRKLASRLSETIAKLHAEVAAAVREVETSHRELGARYVAMVSAQQYVDLISNRWRELPGDGYSANSLLEDLLDAQDRLLLEEVGFARAQ 612
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A518HZF1_9BACT (Outer membrane efflux protein n=1 Tax=Stieleria neptunia TaxID=2527979 RepID=A0A518HZF1_9BACT) HSP 1 Score: 192 bits (489), Expect = 1.640e-54 Identity = 104/202 (51.49%), Postives = 141/202 (69.80%), Query Frame = 1 Query: 7 ELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 E+I + P +PV++EDA+ TAL+ RSE++ +RE++ A+VRL A N+LLP LDLVLETY SGL+G D+ RAW DQFSVGEPSYTAGL FEVPL R+ A++ ++R ELR+L SR T+ L AEV AVR+V T++R L ++Y AM++A+ VE + RW PG +++ LLEDL+D+QDR E F AQ Sbjct: 402 EIIPARPPSLTLVPVSLEDAVVTALQQRSEMNEVARELDTARVRLNAARNELLPMLDLVLETYFSGLRGSQDIGRAWTDQFSVGEPSYTAGLRFEVPLQRRAAKANVMRRQAELRKLASRLSETIAKLHAEVAAAVREVETSHRELGARYVAMVSAQEYVELISNRWRELPGDGYSANSLLEDLLDAQDRLLLEEVGFARAQ 603
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Match: A0A5B9MBV3_9BACT (Outer membrane efflux protein n=1 Tax=Stieleria maiorica TaxID=2795974 RepID=A0A5B9MBV3_9BACT) HSP 1 Score: 192 bits (489), Expect = 1.680e-54 Identity = 101/203 (49.75%), Postives = 145/203 (71.43%), Query Frame = 1 Query: 4 LELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVACNDLLPKLDLVLETYLSGLKGEFDLSRAWVDQFSVGEPSYTAGLVFEVPLYRQEARSRHLQRSVELRRLLSRFELTVENLRAEVETAVRQVRTANRNLQSQYQAMIAAEADVEFLQRRWEMAPGLDRASSFLLEDLIDSQDRRAEAEQAFVTAQ 612 +E+I + P +PV++EDA+ TAL+ RSE++ +RE++ A+VRL VACN+LLP LDLVLETY+SGL+G D+ +W+DQFSVGEPSY+AGL+FEVPL R+ A++ ++R ELR+L R T+ L AEV AVR+V T++R L ++Y AM++A+ V+ + RW PG +++ LLEDL+D+QDR E F AQ Sbjct: 411 VEIIPARPPSLTLVPVSMEDAVVTALQQRSEMNEVARELDTARVRLNVACNELLPMLDLVLETYVSGLRGSQDIGGSWIDQFSVGEPSYSAGLLFEVPLQRRAAKANVIRRQAELRKLAGRLGETIAKLHAEVAAAVREVETSHRELGARYVAMVSAQEYVDLISNRWRELPGDGFSANSLLEDLLDAQDRLLLEEVGFARAQ 613 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108061.1718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108061.1718.1 >prot_M-pyrifera_M_contig108061.1718.1 ID=prot_M-pyrifera_M_contig108061.1718.1|Name=mRNA_M-pyrifera_M_contig108061.1718.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp NLELISIQQPIDNSLPVTIEDAMATALEYRSEVDIASREIEAAQVRLGVAback to top mRNA from alignment at M-pyrifera_M_contig108061:3..614- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108061.1718.1 ID=mRNA_M-pyrifera_M_contig108061.1718.1|Name=mRNA_M-pyrifera_M_contig108061.1718.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig108061:3..614- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108061:3..614- >mRNA_M-pyrifera_M_contig108061.1718.1 ID=mRNA_M-pyrifera_M_contig108061.1718.1|Name=mRNA_M-pyrifera_M_contig108061.1718.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig108061:3..614- (Macrocystis pyrifera P11B4 male)back to top |