mRNA_M-pyrifera_M_contig108054.1716.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108054.1716.1
Unique NamemRNA_M-pyrifera_M_contig108054.1716.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A094DJC4_9PEZI (Uncharacterized protein n=1 Tax=Pseudogymnoascus sp. VKM F-4513 (FW-928) TaxID=1420907 RepID=A0A094DJC4_9PEZI)

HSP 1 Score: 98.2 bits (243), Expect = 5.670e-22
Identity = 52/101 (51.49%), Postives = 66/101 (65.35%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHV-STQLFPHLE--RVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +++ VG PG+GKS   ST   PH +  R+NQD LK+RD+C++ AR HLQ G K VV+D TN D  TRK WVDLA+ECGV  R V   TG ++  H    RA
Sbjct:  302 IILFVGSPGSGKSTFHSTHTSPHAQYIRINQDTLKTRDKCLKTARLHLQEG-KSVVIDNTNPDEATRKHWVDLARECGVQIRCVLFATGAEVCRHNDVVRA 401
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A194VDV5_9PEZI (Bifunctional polynucleotide phosphatase/kinase n=2 Tax=Valsa mali TaxID=105487 RepID=A0A194VDV5_9PEZI)

HSP 1 Score: 95.1 bits (235), Expect = 7.300e-21
Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL--ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +V+  GPPGAGKS    +       ERVNQD LKS+D+C +VAR+HL+ G   VVVD TN DV TR+ W+DLA + GVP R V  +T L LA+H    RA
Sbjct:  301 LVLFCGPPGAGKSTFYWRCLKPFGYERVNQDLLKSKDKCFKVAREHLEAG-DSVVVDNTNADVDTRRQWIDLATKNGVPIRCVWFKTALSLAVHNDAVRA 399
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: UPI0015C2FAC3 (bifunctional polynucleotide phosphatase/kinase n=1 Tax=Geosmithia morbida TaxID=1094350 RepID=UPI0015C2FAC3)

HSP 1 Score: 94.7 bits (234), Expect = 1.070e-20
Identity = 51/102 (50.00%), Postives = 66/102 (64.71%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHLE-----RVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATAR 291
            VV+  GPPGAGKS   T  + HLE     R+NQD+LKSRDRC++VAR+HL  G   +V+D TN DV TR  W+D+A++ GVP R V  +T L +  H    R
Sbjct:  316 VVLFCGPPGAGKS---TFYWNHLEPLGYQRINQDRLKSRDRCVKVAREHLSAG-DSIVIDNTNADVDTRAVWIDVARKMGVPIRCVWFKTPLHVCEHNDAVR 413
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: J6EYU8_TRIAS (Uncharacterized protein n=2 Tax=Trichosporon asahii var. asahii TaxID=189963 RepID=J6EYU8_TRIAS)

HSP 1 Score: 92.8 bits (229), Expect = 4.070e-20
Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHLERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARA 240
            ++V VGPP +GK+    + FP  E VNQD+L +RDRC++ AR+ LQ G + VVVD TNRD KTRK +VDLAKE GVPA A
Sbjct:  271 LIVFVGPPASGKTSFYRRYFPKYEHVNQDKLGNRDRCMKAAREALQAG-RSVVVDNTNRDRKTRKLYVDLAKEQGVPASA 349
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: G0S3G9_CHATD (Uncharacterized protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0S3G9_CHATD)

HSP 1 Score: 89.7 bits (221), Expect = 2.010e-19
Identity = 52/103 (50.49%), Postives = 67/103 (65.05%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL-----ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +++LVGPPGAGKS   T  + HL     ER+NQD LKS+D+C++ A + LQGG   VVVD TN D +TR  WV LA++ GVP R V ++T L L  H    RA
Sbjct:  153 IILLVGPPGAGKS---TFYWKHLKPLGYERINQDLLKSKDKCLKAAAESLQGG-DSVVVDNTNPDSETRAQWVALARKHGVPIRCVWLKTPLPLCEHNDAVRA 251
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A423VM18_9PEZI (Uncharacterized protein n=1 Tax=Cytospora leucostoma TaxID=1230097 RepID=A0A423VM18_9PEZI)

HSP 1 Score: 90.5 bits (223), Expect = 3.370e-19
Identity = 50/100 (50.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL--ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +V+  GPPGAGKS    +    L  ERVNQD LKS+D+C++VA +HL+ G   V VD TN D+ TR+ W+DLAK+  VP R V  +T L LA H    RA
Sbjct:  301 IVLFCGPPGAGKSTFYWRYLKPLGYERVNQDILKSKDKCLKVAGEHLEEG-DSVAVDNTNPDIDTRRQWIDLAKKFDVPIRCVWFKTALSLAEHNDAVRA 399
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A559L2K7_FUSOX (Bifunctional polynucleotide phosphatase/kinase n=56 Tax=Fusarium TaxID=5506 RepID=A0A559L2K7_FUSOX)

HSP 1 Score: 90.5 bits (223), Expect = 3.380e-19
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL--ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +++  GPPGAGKS    +    L  ER+NQDQLK+RD+C++ AR+HLQ G K + +D TN D +TR  WV+LAK+ G+  R V  +T L +  H    RA
Sbjct:  302 IILFCGPPGAGKSTFYLKSLKPLGYERINQDQLKTRDKCVQAAREHLQAG-KPIAIDNTNADPETRTIWVELAKKFGISIRCVWFKTPLQVCEHNNAVRA 400
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A3N2Q1E7_9PEZI (Bifunctional polynucleotide phosphatase/kinase n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2Q1E7_9PEZI)

HSP 1 Score: 90.1 bits (222), Expect = 4.680e-19
Identity = 49/103 (47.57%), Postives = 63/103 (61.17%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHLE-----RVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +V+ VGPPGAGKS      + HLE     RVNQD LKSR++CI+ A++ +Q G    + D TN D +TR  WVDLAK+  VP R V  +T L +  H  T RA
Sbjct:  303 IVLFVGPPGAGKSSF---FWKHLEPLGYERVNQDTLKSREKCIKAAKEIIQDGQSAAIADNTNADPETRAVWVDLAKQLNVPIRCVWFKTPLIVCEHNDTVRA 402
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: UPI001C80B166 (uncharacterized protein n=1 Tax=Diaporthe citri TaxID=83186 RepID=UPI001C80B166)

HSP 1 Score: 89.4 bits (220), Expect = 8.890e-19
Identity = 49/100 (49.00%), Postives = 63/100 (63.00%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL--ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +V+  GPPGAGKS    +    L  ERVNQD LKS+D+C + AR+HL+ G + V VD TN D + R  W+DLA+  GVP R V  +T L +A H  T RA
Sbjct:  306 IVLFCGPPGAGKSTFYWRYLKPLGYERVNQDMLKSKDKCFKAAREHLEDG-EPVAVDNTNPDPEVRGQWIDLARTAGVPIRCVWFKTPLGIAEHNDTVRA 404
[Close]
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Match: A0A8H4UG43_9HYPO (Uncharacterized protein n=1 Tax=Fusarium zealandicum TaxID=1053134 RepID=A0A8H4UG43_9HYPO)

HSP 1 Score: 88.6 bits (218), Expect = 1.670e-18
Identity = 49/100 (49.00%), Postives = 62/100 (62.00%), Query Frame = 1 
Query:    1 VVVLVGPPGAGKSHVSTQLFPHL--ERVNQDQLKSRDRCIRVARQHLQGGAKGVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA 294
            +V+  GPPGAGKS    +    L  ER+NQD LKSRD+C++VAR+HLQ G   V +D TN D  TR  WV+LAK+ G+  R V  +T L L  H    RA
Sbjct:  305 IVLFCGPPGAGKSTFYWKYLKPLGYERINQDLLKSRDKCVQVARKHLQEGTS-VAIDNTNADPDTRTIWVELAKKFGISIRCVWFKTPLALCEHNDAVRA 403
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108054.1716.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A094DJC4_9PEZI5.670e-2251.49Uncharacterized protein n=1 Tax=Pseudogymnoascus s... [more]
A0A194VDV5_9PEZI7.300e-2152.00Bifunctional polynucleotide phosphatase/kinase n=2... [more]
UPI0015C2FAC31.070e-2050.00bifunctional polynucleotide phosphatase/kinase n=1... [more]
J6EYU8_TRIAS4.070e-2058.75Uncharacterized protein n=2 Tax=Trichosporon asahi... [more]
G0S3G9_CHATD2.010e-1950.49Uncharacterized protein n=1 Tax=Chaetomium thermop... [more]
A0A423VM18_9PEZI3.370e-1950.00Uncharacterized protein n=1 Tax=Cytospora leucosto... [more]
A0A559L2K7_FUSOX3.380e-1946.00Bifunctional polynucleotide phosphatase/kinase n=5... [more]
A0A3N2Q1E7_9PEZI4.680e-1947.57Bifunctional polynucleotide phosphatase/kinase n=1... [more]
UPI001C80B1668.890e-1949.00uncharacterized protein n=1 Tax=Diaporthe citri Ta... [more]
A0A8H4UG43_9HYPO1.670e-1849.00Uncharacterized protein n=1 Tax=Fusarium zealandic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108054contigM-pyrifera_M_contig108054:290..583 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score93.2
Seed ortholog evalue7.2e-17
Seed eggNOG ortholog82508.K1VI83
Preferred namepnk1
KEGG koko:K08073,ko:K08075
Hectar predicted targeting categoryother localisation
GOsGO:0000012,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006302,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019205,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046403,GO:0046404,GO:0046483,GO:0050896,GO:0051716,GO:0051731,GO:0051733,GO:0051734,GO:0071704,GO:0090304,GO:0097159,GO:0098501,GO:0098502,GO:0098503,GO:0098504,GO:0098506,GO:0098518,GO:1901360,GO:1901363
EggNOG free text desc.Polynucleotide kinase 3 phosphatase
EggNOG OGs38C15@33154,3NX2Q@4751,3V5UZ@5204,3VFCA@5234,COG0241@1,KOG2134@2759
EC2.7.1.78,3.1.3.32
COG Functional cat.L
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03400
Exons1
Model size294
Cds size294
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815590.3487077-CDS-M-pyrifera_M_contig108054:289..5831622815590.3487077-CDS-M-pyrifera_M_contig108054:289..583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108054 290..583 -
1692277477.4062598-CDS-M-pyrifera_M_contig108054:289..5831692277477.4062598-CDS-M-pyrifera_M_contig108054:289..583Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108054 290..583 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108054.1716.1prot_M-pyrifera_M_contig108054.1716.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108054 290..583 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108054.1716.1

>prot_M-pyrifera_M_contig108054.1716.1 ID=prot_M-pyrifera_M_contig108054.1716.1|Name=mRNA_M-pyrifera_M_contig108054.1716.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
VVVLVGPPGAGKSHVSTQLFPHLERVNQDQLKSRDRCIRVARQHLQGGAK
GVVVDATNRDVKTRKFWVDLAKECGVPARAVCVRTGLDLALHQATARA
back to top

mRNA from alignment at M-pyrifera_M_contig108054:290..583-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108054.1716.1 ID=mRNA_M-pyrifera_M_contig108054.1716.1|Name=mRNA_M-pyrifera_M_contig108054.1716.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig108054:290..583- (Macrocystis pyrifera P11B4 male)
GTGGTCGTTTTGGTGGGTCCACCAGGCGCTGGGAAAAGTCATGTGAGTAC
ACAACTTTTCCCTCACTTGGAGCGTGTCAACCAAGATCAACTCAAGAGTC
GTGACCGATGCATCCGAGTAGCACGTCAACACTTGCAGGGTGGTGCAAAA
GGAGTGGTGGTGGATGCGACAAATCGTGATGTGAAAACACGAAAGTTTTG
GGTCGATCTTGCCAAAGAGTGTGGCGTCCCAGCAAGAGCTGTTTGTGTAC
GCACTGGTCTTGACCTTGCATTGCATCAAGCAACTGCACGCGCA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig108054:290..583-

>mRNA_M-pyrifera_M_contig108054.1716.1 ID=mRNA_M-pyrifera_M_contig108054.1716.1|Name=mRNA_M-pyrifera_M_contig108054.1716.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig108054:290..583- (Macrocystis pyrifera P11B4 male)
GTGGTCGTTTTGGTGGGTCCACCAGGCGCTGGGAAAAGTCATGTGAGTAC
ACAACTTTTCCCTCACTTGGAGCGTGTCAACCAAGATCAACTCAAGAGTC
GTGACCGATGCATCCGAGTAGCACGTCAACACTTGCAGGGTGGTGCAAAA
GGAGTGGTGGTGGATGCGACAAATCGTGATGTGAAAACACGAAAGTTTTG
GGTCGATCTTGCCAAAGAGTGTGGCGTCCCAGCAAGAGCTGTTTGTGTAC
GCACTGGTCTTGACCTTGCATTGCATCAAGCAACTGCACGCGCAGTGGTC
GTTTTGGTGGGTCCACCAGGCGCTGGGAAAAGTCATGTGAGTACACAACT
TTTCCCTCACTTGGAGCGTGTCAACCAAGATCAACTCAAGAGTCGTGACC
GATGCATCCGAGTAGCACGTCAACACTTGCAGGGTGGTGCAAAAGGAGTG
GTGGTGGATGCGACAAATCGTGATGTGAAAACACGAAAGTTTTGGGTCGA
TCTTGCCAAAGAGTGTGGCGTCCCAGCAAGAGCTGTTTGTGTACGCACTG
GTCTTGACCTTGCATTGCATCAAGCAACTGCACGCGCA
back to top