mRNA_M-pyrifera_M_contig108046.1714.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A1W2G801_9BACT (TonB-dependent Receptor Plug Domain n=2 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G801_9BACT) HSP 1 Score: 240 bits (613), Expect = 2.300e-71 Identity = 113/195 (57.95%), Postives = 149/195 (76.41%), Query Frame = 1 Query: 4 DKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKEDTYFDQTHVFNLMFLIP 588 DK T + HS+Y+SAK+ + + +L+GG+H+DH+S+T + + DPR M+S FL++SFYLK+SAG S QYL R F DFDDFR+ NQFW LA+ + VQ+G+QYMIGG+ DKSGWL DLE+Y K+ +G+ R D T+ETG+L T G DLL+KKRF + DLW SYTLS+++TDF E +D YFDQTHV NLM LIP Sbjct: 528 DKHTDDEGLTHSAYMSAKRHLGQKFILEGGMHMDHFSVTSELFLDPRFMISCFLTKSFYLKSSAGRSRQYLFRSFLNDFDDFRLGNQFWNLADSNHGVQTGKQYMIGGLFDKSGWLFDLELYIKDTDGLERQVDPRTLETGSLRTIGMDLLLKKRFQAFDLWGSYTLSHAETDFSEIQDAYFDQTHVLNLMLLIP 722
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A3B7BZP2_9FLAO (Plug domain-containing protein n=6 Tax=Aquimarina TaxID=290174 RepID=A0A3B7BZP2_9FLAO) HSP 1 Score: 170 bits (430), Expect = 1.450e-45 Identity = 79/192 (41.15%), Postives = 128/192 (66.67%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVE-KEDTYFDQTHVFNL 573 +D + + + +HS+Y+S +K N +L ++ G H ++Y+ K Y +PR + SY ++++ YLK+S G S+Q++Q++ + DFDDF ++NQ WFL N D+ Q G Q M+GGV+DKS WLIDLE+Y K +GI+ + N G + + GA++ +KK++ ++ W SY LS ++TDF K D +FDQ H+ NL Sbjct: 523 VDSERRQDAIVHSTYVSLQKNWNEKLNVNFGFHNNYYAPLNKLYINPRLLASYSINKNLYLKSSLGTSNQFIQKKLNNDFDDFNITNQLWFLPNDDIMTQKGIQTMLGGVLDKSKWLIDLELYYKKTKGITNKSNDNL---GNISSIGANIFIKKKWRRLESWISYALSKTETDFNNMKTDAFFDQRHIINL 711
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A1H7HI16_9FLAO (TonB-dependent Receptor Plug Domain n=1 Tax=Aquimarina amphilecti TaxID=1038014 RepID=A0A1H7HI16_9FLAO) HSP 1 Score: 166 bits (421), Expect = 2.520e-44 Identity = 81/196 (41.33%), Postives = 130/196 (66.33%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKE-DTYFDQTHVFNLMFLI 585 +D + + + +HSSYIS +K N +L ++ G H ++Y+ +K+Y +PR + SY ++ YLK+S G S+Q++Q++ + DFDDF ++NQ WFL N D+ Q G Q M+GGV++KS WLIDLE+Y K I+ + ++ G + + GA++ VKKR+ ++ W SY +S ++TDF K+ D +FDQ HV NL L+ Sbjct: 523 IDSERKQDAIVHSSYISFQKNWNDKLNINFGFHNNYYAPLKKFYANPRLLASYSINNKLYLKSSLGTSNQFIQKKLNNDFDDFNITNQLWFLPNDDIATQKGIQTMLGGVLNKSKWLIDLELYYKKTNNIT---NKSSDVHGNISSVGANIFVKKRWHRLETWISYAVSKTETDFNNKKTDAFFDQRHVINLTSLL 715
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: UPI001564F4A4 (TonB-dependent receptor plug domain-containing protein n=1 Tax=Winogradskyella eckloniae TaxID=1089306 RepID=UPI001564F4A4) HSP 1 Score: 161 bits (408), Expect = 1.330e-42 Identity = 81/198 (40.91%), Postives = 128/198 (64.65%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIET--GALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVE-KEDTYFDQTHVFNLMFLI 585 +D + + + IHSSY+S +K N QL+++ G ++YS T + Y +PR S+ +S+ Y KTS G S+Q++Q++F+ DFDDF ++NQ W+L NK++ G Q MIG V D + WLID+E+Y K I+ N IE G+L++ GA++ VKKR+ +++ W SY LS ++T+F D +FDQ H+FN+ L+ Sbjct: 486 IDSRRDQKATIHSSYVSLEKNWNDQLIVNFGFRNNYYSPTHRLYINPRFSASFAISKKTYFKTSLGRSNQFIQKKFTNDFDDFNITNQLWYLPNKEISTLIGTQAMIGAVYDNTKWLIDIELYNKKTNNIT-----NKIEDLHGSLKSVGANVFVKKRWKNLETWVSYALSKTETNFNSISTDAFFDQEHLFNITTLL 678
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A1E5SZ08_9BACT (Uncharacterized protein n=2 Tax=Roseivirga misakiensis TaxID=1563681 RepID=A0A1E5SZ08_9BACT) HSP 1 Score: 161 bits (407), Expect = 2.270e-42 Identity = 78/201 (38.81%), Postives = 127/201 (63.18%), Query Frame = 1 Query: 31 IHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIET--GALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVE-------------KEDTYFDQTHVFNLMFLIP 588 I+S Y S N +L+++ G+ ++++S+ + + PR L+Y +S+SF+LK SA S+QY+++ F+ DFDDFR+ NQFW LA++++P +G YM+GG++D WL DLE+Y K ++ + RP N IE G L G DLLVKKR++ ++ W SY+LS+++ FV ++D +FDQ HV ++ + P Sbjct: 538 INSVYFSLNNQFNQKLIVNAGLRMNYFSMDNQQFLAPRIFLTYLVSKSFFLKGSASGSYQYVRQNFADDFDDFRIENQFWTLADENVPALTGTLYMLGGLVDHGSWLFDLELYSKEVQNVLRPS-GNGIENSLGDLYVTGLDLLVKKRWSGLETWVSYSLSHAEESFVTERNPPGQREPNRLRQDAFFDQRHVLSVKMIAP 737
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A024FL93_9FLAO (Plug domain-containing protein n=1 Tax=Winogradskyella sp. PG-2 TaxID=754409 RepID=A0A024FL93_9FLAO) HSP 1 Score: 157 bits (398), Expect = 3.350e-41 Identity = 75/196 (38.27%), Postives = 126/196 (64.29%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKE-DTYFDQTHVFNLMFLI 585 +D + + + +HS+Y+S +K N +L+ GIH ++YS +K Y +PR SY ++ + Y K+S G ++Q++Q++FS DFDDF ++NQ W+L NKD+ VQ G Q M+ GV S WLIDLE++ K + ++ D G++ + G ++ +KK++ ++ W SY LS ++TDF K+ D +++Q HV NL L+ Sbjct: 523 IDSKRTQSASVHSTYLSLQKNWNDRLIFYLGIHNNYYSPFKKTYINPRLSASYAINNTLYFKSSFGTANQFIQKKFSNDFDDFNITNQLWYLPNKDIAVQKGIQSMLDGVFTISKWLIDLELFLKKTDNVTNKADD---VLGSIYSIGTNIFIKKQWNRLETWISYALSKTETDFNNKKTDAFYNQRHVINLTGLL 715
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: UPI001F19ACBA (TonB-dependent receptor n=1 Tax=Polaribacter sp. DS7-9 TaxID=2836891 RepID=UPI001F19ACBA) HSP 1 Score: 157 bits (398), Expect = 3.500e-41 Identity = 73/196 (37.24%), Postives = 126/196 (64.29%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKE-DTYFDQTHVFNLMFLI 585 +D + + + +HS+Y S +K +L+L+ G H ++Y+ +K++ +PR SY ++++ YLK+S G S+Q++Q++ + DFDDF ++NQ W+L NK++ G+Q M G V D S WL+D+E+Y+K I+ D N G++ + GA++ VKK++ ++ W SY LSN+QT+F D +FDQ H+ N L+ Sbjct: 518 IDSERKQSAVVHSAYFSLQKNWKDKLILNLGFHNNYYTPKKKFHINPRLSASYAVNKNLYLKSSIGTSNQFIQKKLTNDFDDFNITNQLWYLPNKEIDPLKGKQAMFGAVFDTSKWLLDVELYRKKTNNITNKTDDNQ---GSISSLGANIFVKKKWYKLESWVSYALSNTQTNFNNTATDAFFDQKHLINFTTLL 710
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: UPI00094B9E86 (TonB-dependent receptor plug domain-containing protein n=1 Tax=Tenacibaculum agarivorans TaxID=1908389 RepID=UPI00094B9E86) HSP 1 Score: 156 bits (395), Expect = 9.000e-41 Identity = 75/196 (38.27%), Postives = 124/196 (63.27%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEK-EDTYFDQTHVFNLMFLI 585 LD + + + IHS+Y+S +K N +L ++ G H ++Y+ + +Y +PR SY + + Y+K+S G S+Q++Q++F DFDDF ++NQFWFL N+++ G Q+M G V + WLIDLE +KK I++ D+ + G++ + GAD+ VKK + ++ W SY+LS ++T F D +FDQ H+ NL L+ Sbjct: 518 LDLRRDQKATIHSTYLSFQKNWNDKLNINFGFHNNYYTPSGDFYVNPRLTASYAIHKRLYVKSSLGTSNQFIQKKFVNDFDDFNITNQFWFLPNREIAPLKGTQFMFGAVFNPKKWLIDLEFFKKESNNITKKIDN---KRGSISSIGADVFVKKTWNKIEAWISYSLSKTETTFDNTTSDAFFDQRHILNLTSLL 710
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: A0A1M6QNV0_9FLAO (TonB-dependent Receptor Plug Domain n=2 Tax=Maribacter aquivivus TaxID=228958 RepID=A0A1M6QNV0_9FLAO) HSP 1 Score: 155 bits (391), Expect = 3.310e-40 Identity = 74/191 (38.74%), Postives = 119/191 (62.30%), Query Frame = 1 Query: 1 LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKEDTYFDQTHVFNL 573 +D + + + HS Y S K N ++ + G+H D+Y ++++ DPR ++ S + YLKTSAG SHQ++Q++ DFDDF QFW+L ++ V G Q M+G + +KSGWL+DLE+Y +N ++ +++T+E G L++ GADL VKKR+ + + SY+LS TDF + YFDQ H+ ++ Sbjct: 529 IDSRRDQDAMTHSMYASFNKNWNDKVTANFGMHTDYYDPNKRFFADPRISINVRTSDALYLKTSAGRSHQFIQKKLRDDFDDFNNQTQFWYLPDQTTAVLEGYQTMLGALYNKSGWLVDLELYIRNTNNVTLQTNTDTLEKGKLKSMGADLFVKKRWNNFETLFSYSLSEVDTDFGKTLPIYFDQRHILHV 719
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Match: UPI000566F800 (TonB-dependent receptor plug domain-containing protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI000566F800) HSP 1 Score: 154 bits (390), Expect = 4.500e-40 Identity = 72/180 (40.00%), Postives = 112/180 (62.22%), Query Frame = 1 Query: 34 HSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMLSYFLSRSFYLKTSAGISHQYLQRQFSTDFDDFRVSNQFWFLANKDLPVQSGRQYMIGGVIDKSGWLIDLEVYKKNIEGISRPGDSNTIETGALETFGADLLVKKRFTSVDLWCSYTLSNSQTDFVEKEDTYFDQTHVFNL 573 HS+++S K N + G+H D+Y +++Y DPR ++ S +FYLKTS G SHQ++Q++ DFDDF QFW+L ++ V G Q M+G + +KSGWLID E+Y KN ++ +++ ++ G L++ GADL VKKR+ + + SY+LS TDF E +FDQ H+ ++ Sbjct: 537 HSAFLSINKNWNDNITASFGMHTDYYEPNKRFYADPRISVNVRTSDAFYLKTSVGRSHQFIQKKIRDDFDDFNNQTQFWYLPDQTTSVLEGYQTMLGALYNKSGWLIDFELYSKNTNNVTLQTNTSNLQKGKLKSMGADLFVKKRWNNFETLFSYSLSEVNTDFNETLPIFFDQRHILHV 716 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108046.1714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108046.1714.1 >prot_M-pyrifera_M_contig108046.1714.1 ID=prot_M-pyrifera_M_contig108046.1714.1|Name=mRNA_M-pyrifera_M_contig108046.1714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp LDKQTHELSHIHSSYISAKKWMNSQLLLDGGIHLDHYSITQKWYTDPRAMback to top mRNA from alignment at M-pyrifera_M_contig108046:26..613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108046.1714.1 ID=mRNA_M-pyrifera_M_contig108046.1714.1|Name=mRNA_M-pyrifera_M_contig108046.1714.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig108046:26..613+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108046:26..613+ >mRNA_M-pyrifera_M_contig108046.1714.1 ID=mRNA_M-pyrifera_M_contig108046.1714.1|Name=mRNA_M-pyrifera_M_contig108046.1714.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig108046:26..613+ (Macrocystis pyrifera P11B4 male)back to top |