mRNA_M-pyrifera_M_contig108044.1712.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A7Y5F8L5_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5F8L5_9BACT) HSP 1 Score: 161 bits (407), Expect = 7.580e-48 Identity = 80/146 (54.79%), Postives = 114/146 (78.08%), Query Frame = 1 Query: 10 VLVAAYFA--GCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVKGDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEW 441 +LVAA + GC + +PV+IPG++ SDEEQIV +L+DV +GM+SR+I++VLA+VS+ Y+D EGRDY I++YL ++FR Y+ I++TR RP +IV+GDRARA+ETFGTRA PF+ +E+RPI+ GQ+ + L K DN W I+EW Sbjct: 19 LLVAAALSPRGCINR-IPVEIPGVTTQGPSDEEQIVSVLEDVHRGMQSRRIYKVLAHVSKTYRDDEGRDYAAIERYLTELFRGYKLIQITRVRPKVIVQGDRARAVETFGTRAEPFNPNENRPIELRGQMNIYLEKIDNKWMIVEW 163
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A7V2Y0E4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y0E4_9BACT) HSP 1 Score: 160 bits (405), Expect = 1.390e-47 Identity = 84/153 (54.90%), Postives = 105/153 (68.63%), Query Frame = 1 Query: 4 AMVLVAAYFAGCQSGGLPVDIPGL------SGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVK-GDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEW 441 A+ AA+ AGCQS LP IPGL SG R+SDEEQI ++DDVA+GM+SR+IF+VLA+VS+ Y D EGRDY +Q+YL ++FR YR I VTR P I ++ G RA+A+ETFGT A P D PI GQV+V L K D WKI+EW Sbjct: 8 ALACAAAFSAGCQSADLPARIPGLQKIGEASGLRLSDEEQIATVMDDVAQGMQSRRIFKVLAHVSRGYHDAEGRDYAALQEYLNEIFRKYRTIRVTRVVPRITIEAGVRAKAVETFGTVAEPVDPGAEPPIHLQGQVVVYLTKSDGEWKIVEW 160
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A7C3ANG2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3ANG2_9BACT) HSP 1 Score: 139 bits (350), Expect = 1.940e-39 Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 1 Query: 7 MVLVAAYFAGCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVKGDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEWS 444 ++ + +F GC + +D+P + +SDEE+I +L+DV GMESR+I++VLA+VS Y+D EGRDY +Q+YL ++F++Y +++TR RP I V GDRARA+ETFGT A P D P++ GQV V + AWKI+EWS Sbjct: 2 LLFIPVFFGGC-GDRVRLDVPLMPRESLSDEEKIAFILNDVWLGMESRRIYKVLAHVSPGYRDKEGRDYAAVQEYLSEIFKEYSDVKITRMRPLIAVHGDRARALETFGTIARPKDPRRAAPLNLQGQVYVYFERVGGAWKIVEWS 146
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A7C1CLH6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CLH6_9BACT) HSP 1 Score: 129 bits (324), Expect = 2.140e-35 Identity = 61/137 (44.53%), Postives = 100/137 (72.99%), Query Frame = 1 Query: 31 AGCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVKGDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEW 441 AGCQ+G + VD+ ++G ++SDEE+I +L+DV +GME R+I++VLA+VS++Y+D EGRDY+ +++ L + R+YR I++TR P I V+GDRAR ++TFG A E+ P++ GQV++ + + + W+I+EW Sbjct: 18 AGCQTG-MSVDLGRITGSKLSDEEKIALVLEDVQRGMEGRRIYQVLAHVSRSYKDREGRDYEKLREDLNTLLRNYRAIKITRTPPRIRVQGDRARVIDTFGAIAESASPIEYPPMNLQGQVIIMMERFGDTWQIVEW 153
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A1V5YSS7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YSS7_9BACT) HSP 1 Score: 125 bits (315), Expect = 4.910e-34 Identity = 60/147 (40.82%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 1 FAMVLVAAYFAGCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVKGDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEW 441 F+++L GCQ+ P D+ L PR+SDEE+I +L+DV +GME++++++VL++VS+ Y+D +GRD+ +Q+ L + ++YR I +TR P I V+G+RAR +TFGT A P + P++ GQV++ + K + W+IIEW Sbjct: 8 FSLLLCLIGLYGCQTQA-PFDLGRLVNPRMSDEEKITMILEDVQRGMEAQRVYQVLSHVSRAYKDRDGRDFSALQEDLNTLMKNYRNIRITRTPPRIEVRGNRARVTDTFGTIAEPVRADDFPPVNLQGQVILMMEKTGDTWQIIEW 153
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Match: A0A7C8AM38_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8AM38_9BACT) HSP 1 Score: 123 bits (308), Expect = 5.460e-33 Identity = 67/149 (44.97%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 1 FAMVLVAAYFAGCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIFRVLANVSQNYQDTEGRDYDGIQQYLRQVFRDYRFIEVTRARPSIIVKGDRARAMETFGTRATPFDESEHRPIDFDGQVLVELVKQDNAWKIIEWSA 447 FA+VLVA GC S L + + G ++SDEEQI +LDDV +G ESR+I++VLA++S Y D + RDY + L+++F YR I +TR RP IIV+G RARA+ETFG A P ++ P+ +GQ V K ++ W+II W + Sbjct: 9 FALVLVA--LVGCDSP-LQSALQEIGGAKMSDEEQIAVVLDDVRRGAESRRIYKVLAHLSPGYLDAQMRDYQAARDELQRLFSSYREIRITRVRPRIIVQGTRARAIETFGIVAEPVNQEVGLPVSINGQAEVHFEKTNDVWQIIGWKS 154 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108044.1712.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108044.1712.1 >prot_M-pyrifera_M_contig108044.1712.1 ID=prot_M-pyrifera_M_contig108044.1712.1|Name=mRNA_M-pyrifera_M_contig108044.1712.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp MVLVAAYFAGCQSGGLPVDIPGLSGPRVSDEEQIVRLLDDVAKGMESRKIback to top mRNA from alignment at M-pyrifera_M_contig108044:118..573+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108044.1712.1 ID=mRNA_M-pyrifera_M_contig108044.1712.1|Name=mRNA_M-pyrifera_M_contig108044.1712.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig108044:118..573+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108044:118..573+ >mRNA_M-pyrifera_M_contig108044.1712.1 ID=mRNA_M-pyrifera_M_contig108044.1712.1|Name=mRNA_M-pyrifera_M_contig108044.1712.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig108044:118..573+ (Macrocystis pyrifera P11B4 male)back to top |