mRNA_M-pyrifera_M_contig108034.1709.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig108034.1709.1
Unique NamemRNA_M-pyrifera_M_contig108034.1709.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A517WHE7_9PLAN (Arylsulfatase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517WHE7_9PLAN)

HSP 1 Score: 171 bits (434), Expect = 2.400e-49
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 243
            HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASH PERVAQMKAAWQEWAEMTGVANQKHQRGKQIP
Sbjct:  445 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHNPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 525          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A355GJK5_9PLAN (Arylsulfatase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GJK5_9PLAN)

HSP 1 Score: 157 bits (398), Expect = 7.880e-49
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 243
            H+SLFWELRNNQAVRQGKWKLVADR INRWELYDLEQDRTETNNLA  YPERVAQMKA WQ+WAE TGVA +KHQRGKQIP
Sbjct:    2 HDSLFWELRNNQAVRQGKWKLVADRKINRWELYDLEQDRTETNNLAEQYPERVAQMKADWQQWAEKTGVAGEKHQRGKQIP 82          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A518IH02_9PLAN (Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IH02_9PLAN)

HSP 1 Score: 162 bits (410), Expect = 8.010e-46
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 243
            HESLFWELRNNQA+RQGKWKLVADRTINRWELYDLEQDRTETNNLA+ YPERVA+MKAAWQ W+E TG+ANQKHQRGKQIP
Sbjct:  448 HESLFWELRNNQAIRQGKWKLVADRTINRWELYDLEQDRTETNNLAAQYPERVAKMKAAWQSWSEKTGLANQKHQRGKQIP 528          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A517QBE6_9PLAN (Arylsulfatase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517QBE6_9PLAN)

HSP 1 Score: 161 bits (408), Expect = 1.500e-45
Identity = 73/81 (90.12%), Postives = 78/81 (96.30%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 243
            H SLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETN+LA+HYPERV +MKAAWQ+WAE TGVAN+KHQRGKQIP
Sbjct:  445 HASLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNDLAAHYPERVTKMKAAWQKWAEKTGVANEKHQRGKQIP 525          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A517VIB8_9PLAN (Arylsulfatase n=10 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VIB8_9PLAN)

HSP 1 Score: 155 bits (391), Expect = 4.180e-43
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQRGKQIP 243
            H SLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTET NLAS YP+RVAQMKA W +WAE TGVA QKHQRGKQ+P
Sbjct:  441 HASLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETKNLASEYPDRVAQMKADWLQWAEKTGVAQQKHQRGKQVP 521          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: UPI00190DD92C (Arylsulfatase n=2 Tax=Oxynema sp. CENA135 TaxID=984206 RepID=UPI00190DD92C)

HSP 1 Score: 99.8 bits (247), Expect = 1.100e-22
Identity = 42/69 (60.87%), Postives = 52/69 (75.36%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGV 207
            HE+L+WE  NN+A+RQG+WK V ++    WELYDLE+DRTE NNLA+ YPERVA M   WQ WA+  GV
Sbjct:  456 HETLYWEHHNNRAIRQGQWKAVYEKETETWELYDLERDRTEMNNLAADYPERVAAMSEQWQVWAQEVGV 524          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A7V4PBH1_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V4PBH1_9PLAN)

HSP 1 Score: 99.4 bits (246), Expect = 1.760e-22
Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 1
Query:   10 LFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQKHQ 225
            LFW+  +N+AVR+G+WKLV D+T+ RWELYDL  DRTET +LA+  PERV QM AAW +WAE TG + Q  Q
Sbjct:  442 LFWKAFDNRAVREGRWKLVRDQTVGRWELYDLVADRTETCDLAAQQPERVQQMAAAWDDWAERTGASRQAAQ 513          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A5Q3L478_9BACT (Arylsulfatase n=1 Tax=Planctomycetales bacterium 10988 TaxID=2603660 RepID=A0A5Q3L478_9BACT)

HSP 1 Score: 98.2 bits (243), Expect = 3.930e-22
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQK 219
            H++L WE   N+A+RQG WKL  DR + +WELY L+QDRTE NNLA  YPERVA+M  AW EWA+ T ++  K
Sbjct:  449 HKTLCWEWSRNRAIRQGNWKLAWDRGVEKWELYRLDQDRTELNNLADEYPERVAKMSQAWIEWAQETNISYAK 521          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A2D6PSN0_9BACT (Arylsulfatase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6PSN0_9BACT)

HSP 1 Score: 95.1 bits (235), Expect = 4.540e-21
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGV 207
            H  LFWE   N+AVR+G WKLV DR +  WELYDL  DRTE ++LA+ +PERV  + AAWQ WA  TGV
Sbjct:  429 HPRLFWEYARNRAVREGHWKLVWDRAVKEWELYDLHADRTEMHDLAAQHPERVKTLAAAWQAWARRTGV 497          
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Match: A0A5C6EFW3_9BACT (Arylsulfatase n=2 Tax=Rubripirellula reticaptiva TaxID=2528013 RepID=A0A5C6EFW3_9BACT)

HSP 1 Score: 88.6 bits (218), Expect = 9.800e-21
Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 1
Query:    1 HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYPERVAQMKAAWQEWAEMTGVANQK 219
            H++L WE   N+A+RQG WKLV D+TI  WELYDL +DR ET +LA   PERV +M A W  WA+ TG    K
Sbjct:   65 HDTLAWEYTGNRAIRQGNWKLVWDKTIKDWELYDLGRDRCETVDLAGQNPERVKEMSADWFAWAKKTGAPGGK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108034.1709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WHE7_9PLAN2.400e-4998.77Arylsulfatase n=7 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A355GJK5_9PLAN7.880e-4988.89Arylsulfatase (Fragment) n=1 Tax=Planctomycetaceae... [more]
A0A518IH02_9PLAN8.010e-4690.12Arylsulfatase n=2 Tax=Gimesia TaxID=1649453 RepID=... [more]
A0A517QBE6_9PLAN1.500e-4590.12Arylsulfatase n=3 Tax=Gimesia panareensis TaxID=25... [more]
A0A517VIB8_9PLAN4.180e-4387.65Arylsulfatase n=10 Tax=Planctomycetaceae TaxID=126... [more]
UPI00190DD92C1.100e-2260.87Arylsulfatase n=2 Tax=Oxynema sp. CENA135 TaxID=98... [more]
A0A7V4PBH1_9PLAN1.760e-2261.11Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A5Q3L478_9BACT3.930e-2257.53Arylsulfatase n=1 Tax=Planctomycetales bacterium 1... [more]
A0A2D6PSN0_9BACT4.540e-2159.42Arylsulfatase n=1 Tax=Planctomycetes bacterium Tax... [more]
A0A5C6EFW3_9BACT9.800e-2154.79Arylsulfatase n=2 Tax=Rubripirellula reticaptiva T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108034contigM-pyrifera_M_contig108034:8..253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score159.5
Seed ortholog evalue6.9e-37
Seed eggNOG ortholog344747.PM8797T_22023
KEGG rclassRC00128,RC00231
KEGG koko:K01130
KEGG ReactionR03980,R04856
KEGG Pathwayko00140,ko00600,map00140,map00600
Hectar predicted targeting categoryother localisation
EggNOG free text desc.arylsulfatase activity
EggNOG OGsCOG3119@1,COG3119@2
EC3.1.6.1
COG Functional cat.P
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size246
Cds size246
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815590.0118406-CDS-M-pyrifera_M_contig108034:7..2531622815590.0118406-CDS-M-pyrifera_M_contig108034:7..253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108034 8..253 +
1692277477.3131099-CDS-M-pyrifera_M_contig108034:7..2531692277477.3131099-CDS-M-pyrifera_M_contig108034:7..253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig108034 8..253 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108034.1709.1prot_M-pyrifera_M_contig108034.1709.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig108034 8..253 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig108034.1709.1

>prot_M-pyrifera_M_contig108034.1709.1 ID=prot_M-pyrifera_M_contig108034.1709.1|Name=mRNA_M-pyrifera_M_contig108034.1709.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
HESLFWELRNNQAVRQGKWKLVADRTINRWELYDLEQDRTETNNLASHYP
ERVAQMKAAWQEWAEMTGVANQKHQRGKQIP*
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mRNA from alignment at M-pyrifera_M_contig108034:8..253+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig108034.1709.1 ID=mRNA_M-pyrifera_M_contig108034.1709.1|Name=mRNA_M-pyrifera_M_contig108034.1709.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=246bp|location=Sequence derived from alignment at M-pyrifera_M_contig108034:8..253+ (Macrocystis pyrifera P11B4 male)
CACGAGTCCCTGTTCTGGGAACTGCGCAACAATCAGGCGGTCCGACAGGG GAAATGGAAACTGGTGGCGGATCGAACCATCAATCGCTGGGAGCTGTACG ATCTGGAACAGGATCGCACCGAGACCAATAATCTGGCGTCCCACTATCCG GAACGGGTCGCACAGATGAAAGCCGCCTGGCAGGAGTGGGCAGAGATGAC CGGTGTGGCGAACCAGAAGCATCAACGAGGCAAGCAGATTCCGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig108034:8..253+

>mRNA_M-pyrifera_M_contig108034.1709.1 ID=mRNA_M-pyrifera_M_contig108034.1709.1|Name=mRNA_M-pyrifera_M_contig108034.1709.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig108034:8..253+ (Macrocystis pyrifera P11B4 male)
CACGAGTCCCTGTTCTGGGAACTGCGCAACAATCAGGCGGTCCGACAGGG
GAAATGGAAACTGGTGGCGGATCGAACCATCAATCGCTGGGAGCTGTACG
ATCTGGAACAGGATCGCACCGAGACCAATAATCTGGCGTCCCACTATCCG
GAACGGGTCGCACAGATGAAAGCCGCCTGGCAGGAGTGGGCAGAGATGAC
CGGTGTGGCGAACCAGAAGCATCAACGAGGCAAGCAGATTCCGTAACACG
AGTCCCTGTTCTGGGAACTGCGCAACAATCAGGCGGTCCGACAGGGGAAA
TGGAAACTGGTGGCGGATCGAACCATCAATCGCTGGGAGCTGTACGATCT
GGAACAGGATCGCACCGAGACCAATAATCTGGCGTCCCACTATCCGGAAC
GGGTCGCACAGATGAAAGCCGCCTGGCAGGAGTGGGCAGAGATGACCGGT
GTGGCGAACCAGAAGCATCAACGAGGCAAGCAGATTCCGTAA
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