mRNA_M-pyrifera_M_contig108024.1708.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A2E7K4J6_9PLAN (CPBP family intramembrane metalloprotease n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K4J6_9PLAN) HSP 1 Score: 124 bits (311), Expect = 3.280e-34 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTAETAAE 201 LFGILHSVTRVYVIV +LMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTAETAAE Sbjct: 144 LFGILHSVTRVYVIVASLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTAETAAE 210
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A517Q116_9PLAN (CAAX amino terminal protease self-immunity n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q116_9PLAN) HSP 1 Score: 105 bits (263), Expect = 5.250e-27 Identity = 51/62 (82.26%), Postives = 59/62 (95.16%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTA 186 +FGILHS+TR+YVIV TLMGVYLSLLL+LFTPQNLLIPITTHTVYDFLCF+M+I +YR+Q A Sbjct: 144 IFGILHSITRLYVIVATLMGVYLSLLLVLFTPQNLLIPITTHTVYDFLCFLMIIHLYRKQQA 205
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A350K3M9_9PLAN (CPBP family intramembrane metalloprotease (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K3M9_9PLAN) HSP 1 Score: 100 bits (249), Expect = 3.140e-26 Identity = 47/60 (78.33%), Postives = 56/60 (93.33%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQ 180 LFG+LHS+TR+YVIV TLMGVY+SLLLI+FTPQNLLIP+TTHTVYDF+CFM ++ YRQQ Sbjct: 23 LFGVLHSITRLYVIVATLMGVYMSLLLIMFTPQNLLIPVTTHTVYDFMCFMYVMHAYRQQ 82
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A3C0AL22_9PLAN (CPBP family intramembrane metalloprotease n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3C0AL22_9PLAN) HSP 1 Score: 102 bits (255), Expect = 9.650e-26 Identity = 48/66 (72.73%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTAETAA 198 LFG+LHS+TR+YVIV TLMGVY+SLLLILFTPQNLLIP+TTHT+YDF+CFM ++ +YRQQ + A Sbjct: 144 LFGVLHSITRLYVIVATLMGVYMSLLLILFTPQNLLIPVTTHTMYDFMCFMYIMHVYRQQKRDEQA 209
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A6CEY8_9PLAN (Abortive infection protein n=8 Tax=Planctomycetaceae TaxID=126 RepID=A6CEY8_9PLAN) HSP 1 Score: 101 bits (252), Expect = 2.720e-25 Identity = 49/60 (81.67%), Postives = 56/60 (93.33%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQ 180 LFGILHS+TR+YVIV TLMGVY+SLLLILFTPQNLLIP+TTHTVYDF+CFM ++ YRQQ Sbjct: 144 LFGILHSITRLYVIVATLMGVYMSLLLILFTPQNLLIPVTTHTVYDFMCFMYVMHAYRQQ 203
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A518I6J1_9PLAN (CAAX amino terminal protease self-immunity n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I6J1_9PLAN) HSP 1 Score: 100 bits (249), Expect = 7.320e-25 Identity = 47/60 (78.33%), Postives = 57/60 (95.00%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQ 180 LFGI+HS+TR+YVIV TLMGVYLSLLL+ F+PQNLLIPITTHT+YDFLCF+ ++R+YRQQ Sbjct: 144 LFGIVHSITRLYVIVATLMGVYLSLLLVFFSPQNLLIPITTHTIYDFLCFITIMRLYRQQ 203
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A517W350_9PLAN (CAAX amino terminal protease self-immunity n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W350_9PLAN) HSP 1 Score: 100 bits (249), Expect = 8.210e-25 Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQ 180 LFGI+HSVTR+YVI+ TLMGVYLSLLL+ F+PQNLLIPI THT+YDFLCF+ +IRIYRQQ Sbjct: 149 LFGIVHSVTRLYVIIATLMGVYLSLLLVTFSPQNLLIPIVTHTIYDFLCFLYIIRIYRQQ 208
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A5C9C4P0_9BACT (Abortive infection protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9C4P0_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 3.540e-10 Identity = 27/65 (41.54%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYRQQTAETA 195 LFG +H +T +Y ++ ++G YLS L+ + P NLL PI TH ++D+L F+M++ I+R+++A +A Sbjct: 45 LFGAVHWITPLYALLAFVIGSYLSWLMAVIEPSNLLTPIVTHALHDYLAFLMIVAIHRRESATSA 109
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A2S5QQL0_9GAMM (CPBP family intramembrane metalloprotease n=2 Tax=Methylococcaceae TaxID=403 RepID=A0A2S5QQL0_9GAMM) HSP 1 Score: 61.2 bits (147), Expect = 8.550e-10 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYR 174 LFG++HSVT +Y I+ TL+G+YL L + +NLL PI HT+YDFL F+ LI+ YR Sbjct: 135 LFGVVHSVTPLYSILATLVGIYLGLAMDYNGERNLLTPIIIHTLYDFLAFLALIQAYR 192
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Match: A0A849RWB6_9GAMM (CPBP family intramembrane metalloprotease n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A849RWB6_9GAMM) HSP 1 Score: 60.8 bits (146), Expect = 1.150e-9 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFMMLIRIYR 174 LFG++H+VT +Y ++ TL+G+YLSL L +NLL PI H++YDFL F+ L+R+YR Sbjct: 135 LFGLVHAVTPLYAVLATLVGLYLSLSLDYGGERNLLTPIIIHSLYDFLAFVALMRLYR 192 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108024.1708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108024.1708.1 >prot_M-pyrifera_M_contig108024.1708.1 ID=prot_M-pyrifera_M_contig108024.1708.1|Name=mRNA_M-pyrifera_M_contig108024.1708.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=68bp LFGILHSVTRVYVIVPTLMGVYLSLLLILFTPQNLLIPITTHTVYDFLCFback to top mRNA from alignment at M-pyrifera_M_contig108024:411..614- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108024.1708.1 ID=mRNA_M-pyrifera_M_contig108024.1708.1|Name=mRNA_M-pyrifera_M_contig108024.1708.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=204bp|location=Sequence derived from alignment at M-pyrifera_M_contig108024:411..614- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108024:411..614- >mRNA_M-pyrifera_M_contig108024.1708.1 ID=mRNA_M-pyrifera_M_contig108024.1708.1|Name=mRNA_M-pyrifera_M_contig108024.1708.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=408bp|location=Sequence derived from alignment at M-pyrifera_M_contig108024:411..614- (Macrocystis pyrifera P11B4 male)back to top |