mRNA_M-pyrifera_M_contig108021.1706.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A7S4IUV5_9EUKA (Hypothetical protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IUV5_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 1.680e-11 Identity = 38/65 (58.46%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 1 SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVEQSQQQELSRRMQVPGL 195 S QV+AFA GLF C++ +AFK HLRDFLV +KEF DNSEL++EE E QQ+ +R Q+PGL Sbjct: 990 SAQVQAFATGLFT-CDDISAFKVHLRDFLVQMKEFG-GDNSELYVEEQEAQQQKLQEQRSQIPGL 1052
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A5D6Y1Y4_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1Y4_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.110e-10 Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 7 QVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEE----VEQSQQQELSRRMQVPGLV 198 QV F G F ++ AFK HLRDFLV++KEF DN++LFLEE + QQQELS R+ VPGLV Sbjct: 1006 QVVEFVLGCFDMSKDLPAFKKHLRDFLVNVKEFAGEDNADLFLEESLAKTQLQQQQELSARLAVPGLV 1073
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A4P9XD55_9FUNG (Nuclear export receptor Crm1 n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XD55_9FUNG) HSP 1 Score: 63.2 bits (152), Expect = 7.110e-10 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 7 QVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSE----LFLEE----VEQSQQQELSRRMQVPGLVR 201 ++ AF +GLFVHC++ AFK H+RDFLV LKEF + ++ LFLEE +EQ +Q EL +++PG+V+ Sbjct: 1004 KIAAFVQGLFVHCKDFPAFKGHVRDFLVTLKEFSGEEGADGADKLFLEEREAELEQRKQAELQAALRIPGMVK 1076
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A397DZ39_9STRA (CRM1_C domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DZ39_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 7.700e-10 Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 7 QVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVEQSQQQELSR----RMQVPGLV 198 QV AF G F ++ AFK HLRDFLV++KEF DN++LFLEE Q+ L+R R+ VPGLV Sbjct: 9 QVRAFVVGCFDMTKDLAAFKKHLRDFLVNVKEFAGEDNADLFLEESLAMTQERLARETNARLAVPGLV 76
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A0S7GU35_9TELE (XPO1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GU35_9TELE) HSP 1 Score: 58.9 bits (141), Expect = 1.520e-9 Identity = 34/70 (48.57%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 1 SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVE----QSQQQELSRRMQVPGLV 198 S QV+ F GLF ++ AFK HLRDFLV +KEF D S+LFLEE E Q+Q+++ +M VPG++ Sbjct: 26 SAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGIL 95
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: UPI001E1C8FF4 (exportin-1-like n=1 Tax=Coregonus clupeaformis TaxID=59861 RepID=UPI001E1C8FF4) HSP 1 Score: 58.5 bits (140), Expect = 1.550e-9 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 1 SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVE----QSQQQELSRRMQVPGLV 198 S QV+ F GLF ++ AFK HLRDFLV +KEF D ++LFLEE E Q+Q+++ +M VPG++ Sbjct: 12 SAQVKVFVTGLFSLNQDIAAFKEHLRDFLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGIL 81
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: UPI001E1D4EE0 (exportin-1-like isoform X1 n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4EE0) HSP 1 Score: 62.0 bits (149), Expect = 1.820e-9 Identity = 31/68 (45.59%), Postives = 49/68 (72.06%), Query Frame = 1 Query: 7 QVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEE----VEQSQQQELSRRMQVPGLV 198 Q++ F +GLF ++ +AFK HLRDFLV ++EF DNS+LFLEE ++Q+Q+++ +M VPG++ Sbjct: 996 QIKIFIEGLFSFNQDISAFKEHLRDFLVQIREFAGEDNSDLFLEERELTIKQAQEEKKKIQMSVPGII 1063
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A1S3PJU8_SALSA (exportin-1-like n=2 Tax=Euteleosteomorpha TaxID=1489388 RepID=A0A1S3PJU8_SALSA) HSP 1 Score: 58.2 bits (139), Expect = 2.190e-9 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 1 Query: 1 SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVE----QSQQQELSRRMQVPGLV 198 S QV+ F GLF ++ AFK HLRDFLV +KEF D ++LFLEE E Q+Q+++ +M VPG++ Sbjct: 12 SAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEFAGEDTTDLFLEEREMSLRQAQEEKHKLQMSVPGIL 81
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: A0A1Y1IL98_KLENI (Exportin 1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IL98_KLENI) HSP 1 Score: 61.2 bits (147), Expect = 3.390e-9 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 1 SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVEQSQQQELSRRMQVPGLV 198 S +V AF GLF +TTAFK HLRDFLV K F DN +L+ EE ++ E R + +PGL+ Sbjct: 992 SAEVAAFVSGLFEFKNDTTAFKNHLRDFLVQSKGFSSQDNKDLYAEEAAAQREAERQRMLSIPGLI 1057
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Match: UPI0015FCA4D7 (exportin-1-like isoform X1 n=1 Tax=Oncorhynchus keta TaxID=8018 RepID=UPI0015FCA4D7) HSP 1 Score: 57.4 bits (137), Expect = 8.630e-9 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 7 QVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVE----QSQQQELSRRMQVPGLV 198 QV+ F GLF ++ AFK HLRDFLV +KEF D ++LFLEE E Q+Q+++ +M VPG++ Sbjct: 44 QVKVFVTGLFSLNQDIAAFKEHLRDFLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGIL 111 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108021.1706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108021.1706.1 >prot_M-pyrifera_M_contig108021.1706.1 ID=prot_M-pyrifera_M_contig108021.1706.1|Name=mRNA_M-pyrifera_M_contig108021.1706.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp SQQVEAFAKGLFVHCENTTAFKAHLRDFLVDLKEFQETDNSELFLEEVEQback to top mRNA from alignment at M-pyrifera_M_contig108021:66..290+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108021.1706.1 ID=mRNA_M-pyrifera_M_contig108021.1706.1|Name=mRNA_M-pyrifera_M_contig108021.1706.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=225bp|location=Sequence derived from alignment at M-pyrifera_M_contig108021:66..290+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108021:66..290+ >mRNA_M-pyrifera_M_contig108021.1706.1 ID=mRNA_M-pyrifera_M_contig108021.1706.1|Name=mRNA_M-pyrifera_M_contig108021.1706.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig108021:66..290+ (Macrocystis pyrifera P11B4 male)back to top |