mRNA_M-pyrifera_M_contig108007.1703.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: A0A7R9BUM0_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BUM0_9CRUS) HSP 1 Score: 70.5 bits (171), Expect = 2.520e-13 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 19 CTEAANL----HVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWGTP 252 C ++AN +CL C CGRD + HM+ H+ E H + DLS+WCY CD+Y+D F PE+ + H+AK+G+P Sbjct: 75 CPDSANAVDNNWICLICYEILCGRDKAEHMMMHSVENGHLTCISFDDLSIWCYACDSYLDHF-RPELSPIYQQFHIAKFGSP 155
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: A0A7S2XG57_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XG57_9EUKA) HSP 1 Score: 69.7 bits (169), Expect = 4.810e-13 Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 1 Query: 4 CATIGCTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWG 246 C C VCL+C CGR A GHMV HN ET H +A+ + DLS WCYGC +Y+ + V + H AK+G Sbjct: 75 CCADNCGNTKENWVCLTCKKVLCGRFAKGHMVKHNEETGHQVAMGIGDLSFWCYGCRSYLHHLAIRPVYDIYDVFHQAKFG 155
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: I1JAZ4_SOYBN (UBP-type domain-containing protein n=4 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1JAZ4_SOYBN) HSP 1 Score: 67.8 bits (164), Expect = 1.380e-12 Identity = 31/72 (43.06%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 43 VCLSCGVRCCGRDASGHMVDHNCETN--HHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWGTP 252 +CLSC C R + HM+ H+ +TN H +AL DLSVWC+ CDAY+DP +P++ A++ K+G P Sbjct: 55 LCLSCKQVLCSRFVNKHMLHHSRDTNLTHCVALSFSDLSVWCFSCDAYLDPQLIPQLRPLHQLAYILKFGQP 126
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: UPI00193EAC3B (histone deacetylase 6 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193EAC3B) HSP 1 Score: 71.2 bits (173), Expect = 1.460e-12 Identity = 36/78 (46.15%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 19 CTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYID-PFCVPEVGACFAAAHVAKWGT 249 CT + CL C + CGR +GHMV H + H + L DLSVWCYGC+AY+D P P A AHV+K+GT Sbjct: 1024 CTSSNENWTCLICYLVFCGRFVNGHMVQHGDDNRHPLCLSFSDLSVWCYGCEAYVDNPVLFPAKNA----AHVSKFGT 1097
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: UPI002026590B (histone deacetylase 6 isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026590B) HSP 1 Score: 70.9 bits (172), Expect = 1.990e-12 Identity = 36/76 (47.37%), Postives = 44/76 (57.89%), Query Frame = 1 Query: 19 CTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWG 246 C A VCL C CCGR + HMV HN E+ H + L +DLSVWCYGC AY+ P + A + AHV K+G Sbjct: 1068 CGSRAENWVCLVCYKVCCGRYINQHMVAHNSESGHPLVLSFEDLSVWCYGCQAYVHH---PTLLAAKSQAHVEKFG 1140
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: A0A7S1GFA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GFA1_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 5.660e-12 Identity = 34/81 (41.98%), Postives = 42/81 (51.85%), Query Frame = 1 Query: 4 CATIGCTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWG 246 CA G ANL +CL C C RD HM+ H T H + L DLSVWCYGCD Y+D + E+ +A H+ G Sbjct: 52 CADCGEATRANLCLCLRCHQVHCARDVKAHMLAHGEATGHALIANLGDLSVWCYGCDNYLDTLLIKELHPFYARLHLEVHG 132
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: A0A482X1X7_LAOST (UBP-type domain-containing protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482X1X7_LAOST) HSP 1 Score: 69.3 bits (168), Expect = 6.920e-12 Identity = 36/82 (43.90%), Postives = 46/82 (56.10%), Query Frame = 1 Query: 7 ATIGCTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYID-PFCVPEVGACFAAAHVAKWGT 249 A CT A CL C CGR +GHMV H + +H + L DLSVWCYGC+AY+D P P A AH++K+G+ Sbjct: 976 ACTDCTSAQENWTCLICYRVFCGRFVNGHMVQHGDDNSHPLCLSFSDLSVWCYGCEAYVDNPVLFPAKNA----AHLSKFGS 1053
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: UPI0010A08379 (histone deacetylase 6-like n=1 Tax=Podarcis muralis TaxID=64176 RepID=UPI0010A08379) HSP 1 Score: 64.7 bits (156), Expect = 2.670e-11 Identity = 34/76 (44.74%), Postives = 40/76 (52.63%), Query Frame = 1 Query: 19 CTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKWG 246 C A VCL C CCGR HMV HN E+ H + L DLSVWCYGC AY+ P + + AH K+G Sbjct: 64 CGSVAENWVCLICYKVCCGRYIKQHMVAHNSESGHPLVLSFADLSVWCYGCQAYVHH---PILFEAKSQAHRLKFG 136
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: UPI0006259CEE (histone deacetylase 6 isoform X2 n=2 Tax=Athalia rosae TaxID=37344 RepID=UPI0006259CEE) HSP 1 Score: 67.4 bits (163), Expect = 3.300e-11 Identity = 34/67 (50.75%), Postives = 40/67 (59.70%), Query Frame = 1 Query: 43 VCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYIDPFCVPEVGACFAAAHVAKW 243 +CL C C R+ + H V HN ET H M L DLSVWCYGCDAYID P + A AAH +K+ Sbjct: 1098 ICLQCYTVHCARNINEHAVTHNQETEHPMTLSFSDLSVWCYGCDAYIDN---PRLYAAKNAAHRSKF 1161
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Match: A0A1S3JEN4_LINUN (LOW QUALITY PROTEIN: histone deacetylase 6-like n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JEN4_LINUN) HSP 1 Score: 67.0 bits (162), Expect = 4.510e-11 Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 1 Query: 43 VCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLSVWCYGCDAYI-DPFCVPEVGACFAAAHVAKWG 246 VCL+C CCGR + HM+ H T H M L DLSVWCYGCDAYI + VP AAH +K+G Sbjct: 1083 VCLTCYEVCCGRYVNEHMLFHGLSTEHKMVLSYSDLSVWCYGCDAYIHNEIIVPHK----RAAHRSKFG 1147 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108007.1703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108007.1703.1 >prot_M-pyrifera_M_contig108007.1703.1 ID=prot_M-pyrifera_M_contig108007.1703.1|Name=mRNA_M-pyrifera_M_contig108007.1703.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp MCATIGCTEAANLHVCLSCGVRCCGRDASGHMVDHNCETNHHMALCLQDLback to top mRNA from alignment at M-pyrifera_M_contig108007:191..442+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig108007.1703.1 ID=mRNA_M-pyrifera_M_contig108007.1703.1|Name=mRNA_M-pyrifera_M_contig108007.1703.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig108007:191..442+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig108007:191..442+ >mRNA_M-pyrifera_M_contig108007.1703.1 ID=mRNA_M-pyrifera_M_contig108007.1703.1|Name=mRNA_M-pyrifera_M_contig108007.1703.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig108007:191..442+ (Macrocystis pyrifera P11B4 male)back to top |