|
Homology
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D7G4H7_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI) HSP 1 Score: 314 bits (805), Expect = 9.560e-106 Identity = 149/240 (62.08%), Postives = 182/240 (75.83%), Query Frame = 1
Query: 1 RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHR 720
R SR V SFAMEAA+NMHTCFYR+GYDI++PLAP++V H LA ++PL+R++FLT K +LY+ HGSEER+SL PL DE+NGV+ + CFE H+EHLL EN E+CQ LK +Y YDY LMN+TFGLVP GR P TYRL EVMSAG+IPVFV RD++ PF EQ DWPS SFAF P +V S +M TL AVPP QL EMQRKSLEAY +FG DF P AR ++ +L++R+GHR
Sbjct: 6 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVSPLDREFFLTTKCTLYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRS-----LMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHR 240
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: A0A6H5JGQ8_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE) HSP 1 Score: 305 bits (782), Expect = 1.340e-99 Identity = 152/240 (63.33%), Postives = 182/240 (75.83%), Query Frame = 1
Query: 1 RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHR 720
RDSR V S+AMEAA+NMHTCFYR+GYDI++PLAPK VF+ LA + P +R++FLT KGSLYL HGS ER+SL PL DE NGVI +L CFEVH+EHLL ENVEYC+ L +Y+ + Y LMNTTFGLVP GRSPGTYRL EVMSAG+IPVFV D++ PF E DW SFSFAFAP V S +++TLRAVP +L +MQRKSLEAY IFG DF+ AR ++E LQ+R+ HR
Sbjct: 194 RDSRPDVAGSYAMEAATNMHTCFYRSGYDISVPLAPKHVFNDLADVDPWDRNFFLTTKGSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTS-----LMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEHR 428
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: A0A6H5KKV6_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE) HSP 1 Score: 303 bits (776), Expect = 9.850e-99 Identity = 144/238 (60.50%), Postives = 180/238 (75.63%), Query Frame = 1
Query: 1 RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIG 714
R SR V SFAMEAA+NMHTCFYR+GYDI++PLAP++V H LA +APL+R++FLT K +LY+ HGSEER+SL PL DE++GV+ + CFE H+EHLL EN E+CQ LK +Y YDY LMN+TFGLVP GR P TYRL EVMSAG IPVFV RD++ PF EQ DWPS SFAF P +V S +M+TL AVP QL EMQRKSLEAY ++FG DF P A+ ++ ++++R+G
Sbjct: 191 RASRPDVAGSFAMEAATNMHTCFYRSGYDISVPLAPRQVLHDLANVAPLDREFFLTTKCTLYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRS-----LMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLG 423
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D7G4H1_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI) HSP 1 Score: 291 bits (745), Expect = 2.650e-95 Identity = 144/240 (60.00%), Postives = 180/240 (75.00%), Query Frame = 1
Query: 1 RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHR 720
R SR V S+AMEAASNM TCFYR+G+DI++PL KK F++LA +A +R++FLT KGSLYL HGS ER+SL PL DE NGVI +L CFE+H EHLL ENVEYC+ L RY + Y LMN+TFGLVP GRSPGT+RL EVMSAG+IPVFV D++ PF+E DW SFSFAFAP V +++TLRAVP +L +MQRKSL+A+ +IFG F+P AR M+++LQ+R+GHR
Sbjct: 98 RGSRPIVAGSYAMEAASNMQTCFYRSGFDISVPLHSKKAFNNLADVAAWDRNFFLTTKGSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYES-----LMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGHR 332
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D7G4H3_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI) HSP 1 Score: 286 bits (733), Expect = 4.720e-95 Identity = 139/228 (60.96%), Postives = 173/228 (75.88%), Query Frame = 1
Query: 37 MEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHR 720
MEAASNMHTCFYR+G+DI++PL K F++LA +A +R++FLT KG+LYL HGS ER+SL PL DE NGVI +L CFE+H EHLL ENVEYC+ L RY + Y LMN+TFGLVP GRSPGTYRL EVMSAG+IPVFV D++ PF+E DW SFSFAFAP V +++TLRAVP +L +MQRKSL+A+ +IFG F+P AR M+E+LQ+R+GHR
Sbjct: 1 MEAASNMHTCFYRSGFDISVPLPSNKAFNNLADVAAWDRNFFLTTKGTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYES-----LMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGHR 223
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: A0A6H5L9T2_9PHAE (GT47 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE) HSP 1 Score: 263 bits (671), Expect = 9.730e-82 Identity = 128/237 (54.01%), Postives = 171/237 (72.15%), Query Frame = 1
Query: 7 SRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGH 717
+R + N++AM+ + + +C+YR+GYD+++PL P KVF A +RDYFLTFKG+LYL+ +G EER ++ +HD NGV++ + C +H + L EN +YCQ + RY+ YDY + LMNTTF LVP GRSPG++RL EVMSAGAIPVFV RD I+PF+EQ DWPSFSF F+P DV +M+TLRAV P QL EMQRKSL AYW+IFGG T ++ IA +++L QRIG+
Sbjct: 296 ARPHISNTYAMDWSFDALSCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEK-----LMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVT-NYSVIASNAIDMLVQRIGY 526
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: A0A6H5JRU9_9PHAE (GT47 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE) HSP 1 Score: 255 bits (651), Expect = 1.180e-78 Identity = 127/239 (53.14%), Postives = 169/239 (70.71%), Query Frame = 1
Query: 1 RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGH 717
RD + + S AM+A+SNM +CFYR+GYD A+PL + F +L +AP RDYFLT KG+LYL G +ER+S+ PLH E GVI L+CFE+H EHLL EN E+C L ++++Y LMNTTFGLVP GR P TYRLAEVMSAGAIPVFV+RD+++PF E+ DWP+ SF+F P +V ++M TLR+V P +L MQRKS++A++EIFG + IAR +V+ L R+G+
Sbjct: 302 RDKKPLIAGSAAMDASSNMRSCFYRSGYDFAVPLRHQWGFGNLTELAPWHRDYFLTVKGNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYED-----LMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGE-EPGYDRIARVVVDELVLRVGY 534
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D8LQY4_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI) HSP 1 Score: 219 bits (559), Expect = 1.130e-68 Identity = 104/184 (56.52%), Postives = 134/184 (72.83%), Query Frame = 1
Query: 61 TCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQ 612
+C+YR+GYD+++PL P KVF A +RDYFLTFKG+LYL+ +G EER ++ HD NGV++ + C +H + +L EN +YCQ + RY+ YDY + LMNTTF LVP GRSPG++RL EVMSAGAIPVFV RD I+PF+EQ DWPSFSF F+P DV +M+TLRAV P +L EMQ
Sbjct: 9 SCYYRSGYDLSLPLVPGKVFPDTAPSPAPDRDYFLTFKGTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEK-----LMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D8LNT2_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI) HSP 1 Score: 165 bits (418), Expect = 5.040e-44 Identity = 97/256 (37.89%), Postives = 135/256 (52.73%), Query Frame = 1
Query: 34 AMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHD-----------------EDNG---------VITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHRG 723
AM SNM C+YR GYDIAMPL ++ L +AP +R YF TFKG LYL +G ER ++ L NG V+ C H E LL N C+ + Y+ + LMNTTF L+P GRSP TYRLAE +SAGA+PVF+ +D ++PF + W FSF+F P +V +++TLRAVP +LA+MQ +LE + FG G + + ++++L+ R+ R
Sbjct: 340 AMFLQSNMRPCYYRHGYDIAMPLPARRPVERLREVAPQDRKYFATFKGKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYD----SSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQATALEVFDTYFGPGMDNML---HTVLDILEDRLYFRS 587
BLAST of mRNA_M-pyrifera_M_contig108.1700.1 vs. uniprot
Match: D7FXN9_ECTSI (Glycosyltransferase, family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN9_ECTSI) HSP 1 Score: 130 bits (326), Expect = 3.800e-31 Identity = 79/226 (34.96%), Postives = 112/226 (49.56%), Query Frame = 1
Query: 127 LAGIAPLERDYFLTFKGSLYLKSHGSEERVSLKPLHD---------------------------EDNGVITALSCFEVHKEHLLDENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMSAGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQLAEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHRG 723
L I+P +R YF TFKGSLYL +G ER ++ L C +H E LL N C + ++ Y LMNTTF L+P GRSP TYRLAE +SAGA+PVF+ +D ++PF Q W FSF+F P + +++TLRAVP +LA+MQ +LE + FG G + + ++++L+ R+ R
Sbjct: 338 LRKISPRDRKYFATFKGSLYLTGNGMLERSAVLNLRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCHHLHHEQLLSWNKGLCDASERDFDSVSYED-----LMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGQVPWSEFSFSFPPEEA-PRILETLRAVPDKKLAQMQVTALEVFDTYFGPGMGNML---HTVLDILEDRLHFRA 554
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 315.1 |
Seed ortholog evalue | 2.9e-83 |
Seed eggNOG ortholog | 2880.D7G4H7 |
Preferred name | EXTL1 |
KEGG ko | ko:K02366,ko:K02368,ko:K21988 |
KEGG TC | 1.A.17.4 |
KEGG Reaction | R05935,R05936,R10138,R10139 |
KEGG Pathway | ko00534,ko01100,map00534,map01100 |
KEGG Module | M00059 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510 |
EggNOG free text desc. | macromolecule glycosylation |
EggNOG OGs | KOG1021@1,KOG1021@2759 |
EC | 2.4.1.224,2.4.1.225 |
COG Functional cat. | S |
CAZy | GT47,GT64 |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko01003,ko02000 |
Exons | 4 |
Model size | 726 |
Cds size | 726 |
Stop | 1 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815589.6505759-CDS-M-pyrifera_M_contig108:43864..43978 | 1622815589.6505759-CDS-M-pyrifera_M_contig108:43864..43978 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 43865..43978 - |
1692277477.1615562-CDS-M-pyrifera_M_contig108:43864..43978 | 1692277477.1615562-CDS-M-pyrifera_M_contig108:43864..43978 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 43865..43978 - |
1622815589.6669748-CDS-M-pyrifera_M_contig108:44468..44706 | 1622815589.6669748-CDS-M-pyrifera_M_contig108:44468..44706 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 44469..44706 - |
1692277477.1739128-CDS-M-pyrifera_M_contig108:44468..44706 | 1692277477.1739128-CDS-M-pyrifera_M_contig108:44468..44706 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 44469..44706 - |
1622815589.6792274-CDS-M-pyrifera_M_contig108:47708..47908 | 1622815589.6792274-CDS-M-pyrifera_M_contig108:47708..47908 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 47709..47908 - |
1692277477.1818578-CDS-M-pyrifera_M_contig108:47708..47908 | 1692277477.1818578-CDS-M-pyrifera_M_contig108:47708..47908 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 47709..47908 - |
1622815589.6898544-CDS-M-pyrifera_M_contig108:51288..51462 | 1622815589.6898544-CDS-M-pyrifera_M_contig108:51288..51462 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 51289..51462 - |
1692277477.189469-CDS-M-pyrifera_M_contig108:51288..51462 | 1692277477.189469-CDS-M-pyrifera_M_contig108:51288..51462 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig108 51289..51462 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig108.1700.1 >prot_M-pyrifera_M_contig108.1700.1 ID=prot_M-pyrifera_M_contig108.1700.1|Name=mRNA_M-pyrifera_M_contig108.1700.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
RDSRKAVVNSFAMEAASNMHTCFYRTGYDIAMPLAPKKVFHHLAGIAPLE RDYFLTFKGSLYLKSHGSEERVSLKPLHDEDNGVITALSCFEVHKEHLLD ENVEYCQGLKSRYNKYDYNRRGMPRLMNTTFGLVPGGRSPGTYRLAEVMS AGAIPVFVARDIIQPFREQYDWPSFSFAFAPTDVWSSLMQTLRAVPPDQL AEMQRKSLEAYWEIFGGGTQDFIPIARKMVEVLQQRIGHRG* back to topmRNA from alignment at M-pyrifera_M_contig108:43865..51462- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig108.1700.1 ID=mRNA_M-pyrifera_M_contig108.1700.1|Name=mRNA_M-pyrifera_M_contig108.1700.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7598bp|location=Sequence derived from alignment at M-pyrifera_M_contig108:43865..51462- (Macrocystis pyrifera P11B4 male) AGAGATTCCCGTAAGGCGGTGGTTAACAGCTTCGCGATGGAAGCGGCCAG
CAACATGCACACGTGCTTTTACAGGACCGGATACGACATTGCAATGCCTC
TGGCCCCGAAGAAGGTGTTCCACCACCTGGCAGGCATTGCTCCGTTGGAA
AGAGATTATTTCCTCACGTTCAAGGTGCGCGTCTTTGACACACAAGTACA
GCGATCTAACACACGACAAAGTGCGGTCTTCACCCACCGTCTACGACGAC
GCTGCGTGCAGCAGCACAATTATCAAAAGATCGCCTGCCTCGGGGCAGAT
CATGAACTATTACTGCTGTAGATCGTGGACAGTAGCTCCCCACCCGCCGT
GGCGAGAGGTTGTGGGAGACCTTCATGGTAAAGATCCAACCCAGGAGACA
CGTCCTACTACTGTGAACCATGCACACAATATACGCCTCCCACCGGTCAA
CATGAGCTGCACAGATCAGGAATATATCTGCCCGGAAATGTATAGATCAT
GAACTGTGGGAACTGATTATCTAGACGTGGAGGGTTGAGCACGAATCGTG
CACCTCCCCACGTTGCGCTTATCACACCTTCCCTTCGGAATATCTGAGCA
GCCTATCGTGTATGTACAGTCCTGTTCGTGATTTTCGTTCATAATTTTTC
GAACGTATCTCTTCGTACGAGAACTTTTTGGCACAACATATGTAGTCGAC
ACGGGAAGACCAGCCGGACACGTTGGTCGAGGTCCGTGCGCGACCCATCC
AGTGTGGCGCGCGTGGCAAGCCCTCACGGTTTTTGTGTTCGGCGGGAGAG
GATAAGACGATTTCCCTGGTTTCAGCACGAGGGGGCTTATTTTGTACGTA
CGCACACGCAAAATGTTGTCTGTTTTTGCCATAGGCTCTGATGAGCACAC
AGCCCAGACAAATACCACGTGTGTGCGACACACCCATTTGCGCCCTACTG
CCGTGGCTGATTGTGTTTATCGGAGCCTGCGGTCTACAATCCACCATCTA
CCTCTCTTTGCTGCTACTCTGTGTATGATAGATGATACACTCTGAACAAA
AATGTAAGGACCGTTTGGATAAAATAGGAGTATCTCAACTGACCTTACAT
TTCCGACGTGGTGTGTTTTTTTGCACGAGGCACACGCTCAGAATTTCAGA
CACCAGACAACATGCAAAGGACAGGAACAACGTTACAACTCCGCCTAGCA
GCACAAGCAGCAGCAGGCCACACCACTCGCATGTCGCAGGTCTGTGGTGT
ACTGCTTTGGCTAGTTGCTTTATCGGAGGTTGCGGTCCGTCATCTGTTAC
CACCACCACCTCTCTCTCTCTCTCTCTTCTGCTGTGGTGCTGTGCATGTG
TGTGCGGTGTGTCGTGCGCGCCGCGAAAACGAATGCAGGTAATATGGATC
TTTAGTAATATAGTAAGATCGTCACGATGCCCGATTTTGAACTTTTTTAA
GGCGCGAGTTTGATGCTCACAGAGATCACGCCTATTTTTCATAAGTTTGT
TTTTTCAACTTTAATTTTGTCTCATGTACGTAACCCAGACACGACACACA
ACGAGCAGTACATGAGCAGTGCAGGGGCCGTGTTACATCTAGCTGGCTAC
AACGCTATACATACGTGCCGCCCGTCAGCAAAGCAGGAAGCAACATGACG
CGTGTGCGATTTTTGCCCGCGCTGTATTGCTTTGGCTTCCTATTTATACT
GTAGTTGTTTTTTTGCAGCTGCAGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCAGTGCGATTTTCGTGGGCAGCCGAGTGTGGTCGAGAGTT
CCAGCCCCTTCTTGGGTGCATCCTTGCCCACTTCTGTACGTATTACCCCA
CTACTGCTGTACTGCGGTGTTCCGTGTGCCACGCGCGTGTGTGCGTTGTG
TGCCGTGAGTCATGCGTGGATTGCCTTCGGAACCTTTTATTTGTCGGCAG
TGGTCGTTTTTTTTGCGGGAGAGGCCTTCTTTGCCATGAGCGACACAACA
TAGACATTCATTAACATGCTGACTAAATACGATGCCTTGTACAATGTTTG
GCGGATTCATCAAGAAAATCTATGAAAGCGATTCAGTCAATAGGAACAGT
CCCAGAATATTTCTATGCGTGTATATCTTGTCCCCAAATATGCAGGTACA
GTTCTAAAAGGATCTACTGCTGTGCTGATCTATATGTACAGCAGTTGTGT
GCAGATATTTCATGGCGTCGTAATGTTGTATCATATGCGCATTCTGCAAT
GTCGCATCCTGTAACGTTTGCAAATTCGTTCTTGCGCCACTCCCCTTGGC
GCGTCCCGAATGGGACCCTTGTACTACCTTGTACTCTAATATGAATAAGA
TAGGCTGCTCGGCGAATTGGTCAAACTAAAGTTTGAGCTCACCACACTTG
CACGTGTGCACACTTCTCGTGTACATGAATACCGCCACGAAACACAAAAA
ATCATGATCTCGTAGGCAAGATTAACGTCACGCCCTCGGAGATATTCATA
GTCTCGACCGTGTAGGTGCGATTCAAATCACGACTGCGGGGACGTTTAGG
AACTACCCCCGGGCTTCAGGCATCACGTTCCAGATGCAGGTGGCTGTCTC
GAGGCCTGTGAGGGCTTCTAGAACTGGGAGGGATGTTGGCGTCTACGTAG
ACCAGAATAAAATCACGACTATTGAGGCATTAAGGAGCCATCTCCGGATG
TCAAGCCTAGCGTTTCGGGTTCGTGTTAGGGATATAATTCACTACTACGG
GGAACATTCATGTAGGACCAATCTCCCTTGTTTCAGGCCTGGCGTTTCAG
AACTGTACGTGATGCCATATAGCTATCATTCCGCCCGGTTTATTCCATCG
AAGGGGCGTCTAAATATAATGTCAAGCCAGCAGCTGTCAAGATCAGGCGC
GTGCTACGATAGGAGTGGATTTTTTTTACAAAGTGTCACTGGGACTGACG
GGAGCTCCTCACCTGAGAGATTTCCCAATAATATGGCATTGCGCTTTTTT
CTGTGGCCTTGCACTTTTTTCTGGATTGTCAGGAGTATTTTACGCAATGC
TTCTGTATGCATTTGAGGCCATGGCAGTGTTCATTGGTTTGCACTGTCGG
GTTTTTCGCAAGGTCAGGTTTGCAGCCGAGTATGCATACAGTTAGAGCTC
CTCCAGTAAGAGCCCACAGAATATAATATTCATTAGGCGCAACCCTCAAG
AGGGGCTTTTTTTTTAACCAAGATGAGTTTCACAGAGAGAGCAGTCCGCT
GTGTGAGCAATGGTCACTATGTCCCCCGCTCAAGAAGGGATGTAGTCTTC
GTTTTCGTGCACAGACTAATCATAGGCTTACCCGACGCGTTTGTGAAATC
GTCTTGTTGTCCATGGTGCTACTGCTATGACACTGTCCTTCATGAGGCCA
TCTGTGCTATACCTCCAGTAGTCACGAGCGAGTCGAATTTTAACGCGCGG
CGTACAGAGACGAGGTTTCAATAAATTCCTCGATCTCACTTTTGAGGTGT
GTTGTTTATCTTCTTGTTTTCGTTTTTATAAATACTCATAACTCGGAACC
GCAGGGAAGCTTGTACCTCAAGAGCCACGGGTCGGAGGAACGGGTCAGCC
TGAAACCTCTGCACGACGAGGACAACGGGGTGATCACAGCCCTGAGCTGC
TTCGAGGTGCACAAGGAACACCTCCTGGACGAAAACGTGGAGTACTGCCA
AGGACTAAAGAGCCGCTACAACAAGTACGACTATAACAGGCGAGGAATGC
CACGGTAGAAGGGACTTGCTTGTCTCGGTCGACTTTAACTGTTTTAGGAC
TGCAGTCCCCTTTTGGGGAACAAAGTACTCTATTTCCAAGTAGTTTGCTC
CCGAAACGGGACTGCGGTCCTAAGAGGGTTTATAACGTACTGTATTTCCA
CACGTCGGGCAGTTAGCGATCTAAACTCCAAACCATCAGATACGATCTAC
AGCAGGTCATCCAGATCCCACCCTGAGTTACGCGAAAGCAGTGTTGTACA
GAGATTCCATGCGTGTGGCAAACACGTGCGGAAGAGCCGGGTCATTATGT
AGTTCCCGCCGAGTCAAGACACTGACTGGCCCGTGCAGATCATGTGATGT
GATGCAGAGGTTTTGTTTTTCGGTTCGAACGATCTAGGCCATGAGACGGG
CATCTGCTCTGTCCGATGGAGGGCAAAAATTCTAACTGGCGGGTCTCCTA
AGCTGAGAAACGACCACAACTCGGACAAATCATCTTGTGTTCCATCCACA
GTTGATGACCCAGACATTTTAAGGCAGATCTATCCCCGATCTCGGACGAT
CTACAGCAGTAGCTCATATTGCCGGTTGGCAACCGTATAATCTGCATGAT
CTAGAGCACGTATTCTATATCGGATACCAGGTACGTACTATGCACCTGGT
ACTGCTGCACAATCTATCACGACCTCAGGTGAGGAACTACATACAGTAGA
TGATCTATCTGTAGATGATCTAGGTCATGATCTGCCCGAGGGGTGGAAAC
TGCCCAACATATGCGGGATCCCGCTTACACTATTACGGGGGACCATAATA
AATAGAACAAAATATTGTTAGCAAAAATAGGGAAATATATAGGCTTTGCG
TGTACCGTGGGTCCTATTTACTATGGTCCCCCGTAATATTTAGTTGCGTT
CCATTTTTTTTTTCGAACTATACCGAACTCATGGGGTAGCTCATCGTGTT
AATAACTTGTACAACAATGCTTCTCAAAATAATCGGTATTGTGATCGTGA
CACAGTGGTTTCTATATCGTTTTGTTGTTGGTTTGTTTTTATCCCGTCCC
ATTTGTTATCTTCGCCTTAATTTTGTCGCCCTCCTGCGACTCGTAACTCA
AATCCAGGGTCACCTCGTAGCAGGTTATTCTCCCCTTGGTTCGCGCCTTG
CCCTCCCTTCCCTCGTCGACTCGCGTCTAATTGATATATGCCTGGTAGAG
CTGACCCAAGCCCATGGGAGGTATTAGTAGGATTGCGCGGTACAATTTTT
CTCGAAATTGATACATATGTTGGGTGAGGTATATGACGCACAGCAGTACA
GATCCCGATGTTATTTAGAAAATCAGATAATCAAATGGTACCATGCGCTA
CCGTGGAACGACTCACATGAACTCGCGTTCATAATCCAGTACAGAGTATG
GCACCCCTCTCTATCTGCACCTTGGGACGACTCTCAACACGTACCAGGTA
CAGCAGGGTTTATGAAGGAATCAGAGATAAAAAACGGCACCCTCGGGTAC
GCGCAGCAGGAAATTGCGAAAATATGTACTGCCATTAAACGGTGTACCCC
CCCCTCTCTACCATGTTGGGAACCTGAGAAAAATGTGGTGCCACAACCCC
CCTCTGTATACCACGTCACGAAGATGGCATAATATTAATAGTACGATGTT
AGGAACCTGCGAAAATAGATGGCGGGACCGAAAATATGAAGCCCCCCTCT
CCCATTTTAGGAACCCTGGTGAAAAGTTGGTTACTCCCCCCCTCCGTCTA
TTATGACGTAATAGTAGAGGAACCTGAGAAAAACACCGCGCGAATCATGA
AAAGAGATATAGTAGCCACACTCTCTACGTCATGTTAGGAACCTGAAAAA
CTAATGGTCACCCCCTACAAGGTTGAGGAACCTGAGGAATCACAGCACCC
CCTTTGAACCGTGGGGCCACTCTGTATGATATCGCGTTATTGCGGGGGAC
CATAGTAAATAGGACCTACGGTACACACACAAAAACCTATATATTTGGCT
ATGTTTACTAACAATATTTGGTGCTATTTACTATGGTCCCCCGTAATGGG
AAACTGAGAAACAAAATACCACCACAAAAAAAAACTCTTATACCATGTTA
TGATTTTGAGACAACATGGTACAGTACCCCCCTGTACCATGGTACATGGG
AAGCTGACGAACTATGATGCCACCCCCTGCCTACCCGACCTTAATGACAT
AATTGTAGGGACCTAAGAAAATAATGGTATACTATTTAGAGCACTCTACC
AAGTTAACCGCACTCCATTTTGGGGGACAAATTGCTTGGATTTTTGTTAG
CAATAAAGGTAGTGCAGCAGTAAATGGGTCAAGAACCTGAGCAAATATCG
TAGACCGGTGCTATGTACGGTAGGGTAGCACTTTTTGCCTATAACAAAAT
CTAAAGGACAATGCTTCTTAACCCAGAATCGTCGGGATTTCAACACATCT
TGGTTTCTCAACATGAATGTTTTCTGTACCTAGGCCATGGTATTGTTGGC
CATCGGGTTGCACCTCAACCGTACGAGTAGCATGTGACGATACCCTCCTC
TACTATGTTAGGAACGTGAGAAACTTATGGTGCGCACTACCTACACTGGG
ACGACGCTCATGACAGCTTCTTGGGAACCTGAGAAATCAAAATGGTTACC
CCCCCCCCCGCGCCCTCGAAGGTCTATGGTCTTTCGACTACGGCAATGCC
TGATAATCATATTGAGTACCCCCCTTCCCCGCCCCCCCCCCGCCCTCTGT
AAAGCATGTTGGGAACCTGACAAAATATGAGACCTCCCTCTGTATAACGC
GAGCCGTCCGTCTACCGTGGGACGACTCTTTAACGTAGTGGTATGATCCA
CGGGGGGAAAAATGGCACCCTCTAGGCTTTCGGGTACCATGGTCCTGGGA
GTCGGCATTTGGGTGGGGCATTGTATAGCTCATCATGTTCCACACAAAGC
TGACAATCGATCGATTGGTACCCCCCTCCACGGTGTGGGTCGACTCTTCA
TGACAGGCTCATGAACACGACCTTCGGGCTCGTGCCAGGCGGCCGCTCCC
CGGGGACGTACCGGCTGGCGGAGGTGATGAGCGCCGGCGCGATACCGGTC
TTCGTGGCCCGGGACATCATCCAACCGTTCCGCGAGCAGTACGATTGGCC
GTCGTTTTCTTTCGCGTTTGCACCGACCGACGTTTGGTCTTCTCTCATGC
AGACGTTGCGAGCCGTTCCTCCAGACCAGCTGGCGGAAATGCAGGTGAGG
AGGGATGGGCGGGGGGGGTGTACGTGATATCATGCATGACCGTAGTCGTA
TGACCATACACCCGCGTATCCCTACAATGCCGGGACGGGGCACGTCGGGT
TTTCACCGACCAGGCAGACATTGTTGAGGAGGGGAGAAGAGGGGAAGGGA
GAGGAGGGCGTACTCATGTGTTGCTTGCAATAGAAATCGTACCATTGACC
ACGCATCCATTTCTAGACCGAACACCGGGAGTGCGTGGCGGGAAGGAACG
AGGGAGGGAGGGGGGAAGAGATGGAGGGGGTGCGCGACGGGGCGCAGCTT
CACCATCTTCTTGCGCTTCGCGTAAAAGTCGAGCGAATGGTCCTTCGCCT
CCGATGCAGTATGTGCCGTCCAGTGCTTTCGTCGCGTGCCAGGTACTGCT
ACAGGTACGGCAGACAACATCTCACCCTCCAACAAACTCCGGAACTTTGT
CTCTCCTGACTCTTGTCCTTGATGAAATTGGCAGCGCAAATCCCTCGAGG
CTTATTGGGAAATATTCGGCGGAGGTACGCAAGACTTCATCCCAATCGCC
AGAAAAATGGTGGAGGTGCTCCAGCAACGAATCGGCCACAGGGGATAG back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig108:43865..51462- >mRNA_M-pyrifera_M_contig108.1700.1 ID=mRNA_M-pyrifera_M_contig108.1700.1|Name=mRNA_M-pyrifera_M_contig108.1700.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig108:43865..51462- (Macrocystis pyrifera P11B4 male) AGAGATTCCCGTAAGGCGGTGGTTAACAGCTTCGCGATGGAAGCGGCCAG CAACATGCACACGTGCTTTTACAGGACCGGATACGACATTGCAATGCCTC TGGCCCCGAAGAAGGTGTTCCACCACCTGGCAGGCATTGCTCCGTTGGAA AGAGATTATTTCCTCACGTTCAAGAGAGATTCCCGTAAGGCGGTGGTTAA CAGCTTCGCGATGGAAGCGGCCAGCAACATGCACACGTGCTTTTACAGGA CCGGATACGACATTGCAATGCCTCTGGCCCCGAAGAAGGTGTTCCACCAC CTGGCAGGCATTGCTCCGTTGGAAAGAGATTATTTCCTCACGTTCAAGGG AAGCTTGTACCTCAAGAGCCACGGGTCGGAGGAACGGGTCAGCCTGAAAC CTCTGCACGACGAGGACAACGGGGTGATCACAGCCCTGAGCTGCTTCGAG GTGCACAAGGAACACCTCCTGGACGAAAACGTGGAGTACTGCCAAGGACT AAAGAGCCGCTACAACAAGTACGACTATAACAGGCGAGGAATGCCACGGG AAGCTTGTACCTCAAGAGCCACGGGTCGGAGGAACGGGTCAGCCTGAAAC CTCTGCACGACGAGGACAACGGGGTGATCACAGCCCTGAGCTGCTTCGAG GTGCACAAGGAACACCTCCTGGACGAAAACGTGGAGTACTGCCAAGGACT AAAGAGCCGCTACAACAAGTACGACTATAACAGGCGAGGAATGCCACGGC TCATGAACACGACCTTCGGGCTCGTGCCAGGCGGCCGCTCCCCGGGGACG TACCGGCTGGCGGAGGTGATGAGCGCCGGCGCGATACCGGTCTTCGTGGC CCGGGACATCATCCAACCGTTCCGCGAGCAGTACGATTGGCCGTCGTTTT CTTTCGCGTTTGCACCGACCGACGTTTGGTCTTCTCTCATGCAGACGTTG CGAGCCGTTCCTCCAGACCAGCTGGCGGAAATGCAGGCTCATGAACACGA CCTTCGGGCTCGTGCCAGGCGGCCGCTCCCCGGGGACGTACCGGCTGGCG GAGGTGATGAGCGCCGGCGCGATACCGGTCTTCGTGGCCCGGGACATCAT CCAACCGTTCCGCGAGCAGTACGATTGGCCGTCGTTTTCTTTCGCGTTTG CACCGACCGACGTTTGGTCTTCTCTCATGCAGACGTTGCGAGCCGTTCCT CCAGACCAGCTGGCGGAAATGCAGCGCAAATCCCTCGAGGCTTATTGGGA AATATTCGGCGGAGGTACGCAAGACTTCATCCCAATCGCCAGAAAAATGG TGGAGGTGCTCCAGCAACGAATCGGCCACAGGGGATAGCGCAAATCCCTC GAGGCTTATTGGGAAATATTCGGCGGAGGTACGCAAGACTTCATCCCAAT CGCCAGAAAAATGGTGGAGGTGCTCCAGCAACGAATCGGCCACAGGGGAT AG back to top
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