mRNA_M-pyrifera_M_contig107988.1697.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A6H5KW44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW44_9PHAE) HSP 1 Score: 105 bits (263), Expect = 3.190e-25 Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 1 Query: 1 IRERMLGAINGTSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLRVGAGG 183 IRERM A+NGTSPLKFVL+SGHDTT IPF+AAVAP AWD TWP YA LASIELLR+G GG Sbjct: 337 IRERMAAAMNGTSPLKFVLLSGHDTTFIPFMAAVAPLAWDGTWPRYATLASIELLRIGGGG 397
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A482RVD1_9ARCH (Histidine-type phosphatase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVD1_9ARCH) HSP 1 Score: 61.6 bits (148), Expect = 1.360e-9 Identity = 29/62 (46.77%), Postives = 37/62 (59.68%), Query Frame = 1 Query: 1 IRERMLGAINGTS-PLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLRVGAGG 183 IR + +N S LKF L GHDTT++P LAA+ WD WP YA++ SIE+ AGG Sbjct: 319 IRNNIEAILNNQSYALKFALFGGHDTTIMPLLAAILGEDWDMVWPGYASMISIEIYNATAGG 380
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A7S3GTC4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GTC4_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 2.550e-9 Identity = 34/74 (45.95%), Postives = 42/74 (56.76%), Query Frame = 1 Query: 1 IRERMLGAING-------TSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLR------VGAGG 183 +R +L I+G T+PLKF L S HDT+L+PFLAAV WD W YA L S+EL +GAGG Sbjct: 332 MRNNLLNIISGGTSSARSTTPLKFALFSAHDTSLMPFLAAVLGDVWDGRWAGYAYLVSMELYSASAASPLGAGG 405
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A421F1A2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421F1A2_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 8.030e-8 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1 Query: 22 AINGTSPL-KFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLRVGAG 180 A+NG + K + HD+TL+PF+AAVA WD+TW PYA + +IEL + AG Sbjct: 338 ALNGGPDVYKLSVTMAHDSTLMPFIAAVAKENWDRTWTPYAGMLAIELYKTKAG 391
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A7S2XXG6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXG6_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 2.040e-7 Identity = 23/39 (58.97%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 46 KFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIEL 162 KF L SGHD+T++P LAA+AP WD W PYA+L EL Sbjct: 85 KFALYSGHDSTVMPLLAALAPEEWDGAWAPYASLLVFEL 123
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A0L0S2B8_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S2B8_ALLM3) HSP 1 Score: 54.7 bits (130), Expect = 3.540e-7 Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1 Query: 22 AINGTSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLR 168 A T+P + L SGHDTTL+P +AA+ AWD TWPP+A+ ++EL + Sbjct: 203 ASGATTPPRLALYSGHDTTLVPLVAALG--AWDHTWPPFASHLTLELFQ 249
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: W7TZ97_9STRA (Component of the counting factor complex n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZ97_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.790e-7 Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 7 ERMLGAINGTSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLRVGAGG 183 E M G S LKF L GHDT+++P LAA WD WPPYAA+ ++EL G Sbjct: 324 ENMQARAGGRSHLKFGLFLGHDTSVLPLLAAWG--VWDGAWPPYAAVLAVELYAADGTG 380
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A4D9D9C0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9C0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.830e-7 Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 7 ERMLGAINGTSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLRVGAGG 183 E M G S LKF L GHDT+++P LAA WD WPPYAA+ ++EL G Sbjct: 361 ENMQARAGGRSHLKFGLFLGHDTSVLPLLAAWG--VWDGAWPPYAAVLAVELYAADGTG 417
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: B6AC91_CRYMR (Histidine acid phosphatase family protein n=2 Tax=Cryptosporidium TaxID=5806 RepID=B6AC91_CRYMR) HSP 1 Score: 54.7 bits (130), Expect = 3.830e-7 Identity = 25/41 (60.98%), Postives = 30/41 (73.17%), Query Frame = 1 Query: 46 KFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLR 168 KF+L SGHDTT+IP +AA+ WDK WPPYA+ IEL R Sbjct: 446 KFILWSGHDTTIIPTMAAI--KVWDKKWPPYASSFIIELYR 484
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Match: A0A0L0RXW4_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0RXW4_ALLM3) HSP 1 Score: 53.1 bits (126), Expect = 1.280e-6 Identity = 24/48 (50.00%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 28 NGTS-PLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELLR 168 +GT+ P +F L SGHDTTL+P +AA+ WD TWPP+A+ ++EL + Sbjct: 199 SGTAKPPRFALYSGHDTTLVPLMAALG--VWDHTWPPFASHLTLELFQ 244 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107988.1697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107988.1697.1 >prot_M-pyrifera_M_contig107988.1697.1 ID=prot_M-pyrifera_M_contig107988.1697.1|Name=mRNA_M-pyrifera_M_contig107988.1697.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp MLGAINGTSPLKFVLISGHDTTLIPFLAAVAPSAWDKTWPPYAALASIELback to top mRNA from alignment at M-pyrifera_M_contig107988:267..449- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107988.1697.1 ID=mRNA_M-pyrifera_M_contig107988.1697.1|Name=mRNA_M-pyrifera_M_contig107988.1697.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=183bp|location=Sequence derived from alignment at M-pyrifera_M_contig107988:267..449- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107988:267..449- >mRNA_M-pyrifera_M_contig107988.1697.1 ID=mRNA_M-pyrifera_M_contig107988.1697.1|Name=mRNA_M-pyrifera_M_contig107988.1697.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig107988:267..449- (Macrocystis pyrifera P11B4 male)back to top |