mRNA_M-pyrifera_M_contig107971.1696.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: D8LJ58_ECTSI (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ58_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 3.490e-21 Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 1 MATAAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 M TAA+D+GD+ A + L VL KFPGSQRV+RL+GMR EA G F AA IYEEMV NPANSLARKRQV + Sbjct: 64 MVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAV 135
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A6H5KPY1_9PHAE (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY1_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 3.620e-21 Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 1 MATAAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 M TAA+D+GD+ A + L VL KFPGSQRV+RL+GMR EA G F AA IYEEMV NPANSLARKRQV + Sbjct: 64 MVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAV 135
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A7S2GPJ3_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPJ3_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 8.860e-14 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1 Query: 10 AAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 AA+D D + + L LQ KFP S RVKRL+GM+SEA G++ AA +IY++M+ +NPAN+LA KRQVC+ Sbjct: 59 AALDLHDTELSKECLKELQTKFPESARVKRLEGMQSEALGEWGAAKEIYKQMLEENPANTLAMKRQVCV 127
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A197JL96_9FUNG (ER membrane protein complex subunit 2 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JL96_9FUNG) HSP 1 Score: 62.8 bits (151), Expect = 8.430e-10 Identity = 34/72 (47.22%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 1 MATAAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 +A AA+D GD A K + L+ +FPGS RV+RLQGM+ EA G AG+IY+ ++ ++ N LA KRQV + Sbjct: 49 VAIAALDMGDDGLALKCIQALETRFPGSPRVRRLQGMQLEAVGKLAEAGQIYKAILEEDETNVLASKRQVML 120
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A7S3XW17_HETAK (ER membrane protein complex subunit 2 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW17_HETAK) HSP 1 Score: 60.8 bits (146), Expect = 2.380e-9 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 10 AAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 A++D G+ A+ L L+ KFPGS RVKRL G+ E+ ++ A +Y E++A NPAN+LA KR+ + Sbjct: 62 ASLDLGEQEVANHALNALKKKFPGSSRVKRLAGLYEESEENYPQAEALYAELLAANPANTLALKRRAAV 130
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A7S4EW27_CHRCT (ER membrane protein complex subunit 2 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EW27_CHRCT) HSP 1 Score: 60.1 bits (144), Expect = 9.540e-9 Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 1 Query: 34 AAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 A A++ LG L +FP S RVKRL+ M SEAGG+ +AA + YE+++ Q+P N A KRQV + Sbjct: 97 ALAEQYLGRLSTQFPESLRVKRLEAMMSEAGGELEAAMQKYEDILKQDPNNLYAMKRQVAL 157
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A8J2WTM1_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTM1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 2.620e-8 Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 10 AAMDAGDLAAADKQLGVLQLKF----PGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 AA+D D D L +F P SQR++RL+G+ +EA GD++AA + Y+ ++AQNPANS A KR+VC+ Sbjct: 71 AALDVDDAPLRDACQSALLKRFGGANPPSQRLERLEGLVAEAAGDWEAALQRYKGVLAQNPANSTALKREVCV 143
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: UPI001F03A39B (LOW QUALITY PROTEIN: ER membrane protein complex subunit 2-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03A39B) HSP 1 Score: 58.2 bits (139), Expect = 4.230e-8 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 1 Query: 10 AAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 AA+D G A L L +FPGS RVKRL M+ EA F A +IY +M+ +PANS+A KR++ + Sbjct: 58 AALDLGKTDTASMCLKALNAQFPGSLRVKRLIAMKHEAMNQFDKATEIYNDMIKNDPANSIAYKRKISL 126
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: M5FY72_DACPD (ER membrane protein complex subunit 2 n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5FY72_DACPD) HSP 1 Score: 57.8 bits (138), Expect = 5.710e-8 Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 10 AAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCIH 219 AA+D GD A A + L +FPGSQRV+ LQG+R EA G+ A ++YEE++ +N + KR + ++ Sbjct: 49 AALDMGDTALAGELFSQLDQRFPGSQRVEMLQGVRLEADGELDTARRLYEEILQGEESNLIIWKRLITVY 118
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Match: A0A3P8YY18_ESOLU (ER membrane protein complex subunit 2 n=1 Tax=Esox lucius TaxID=8010 RepID=A0A3P8YY18_ESOLU) HSP 1 Score: 57.4 bits (137), Expect = 7.660e-8 Identity = 27/52 (51.92%), Postives = 39/52 (75.00%), Query Frame = 1 Query: 61 LQLKFPGSQRVKRLQGMRSEAGGDFKAAGKIYEEMVAQNPANSLARKRQVCI 216 L+ +FPGSQRVKRL GMR EA ++ AGK Y+ ++ ++P N+ ARKR++ I Sbjct: 93 LKKQFPGSQRVKRLGGMRLEALEKYEEAGKQYDSILQEDPTNTAARKRKISI 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107971.1696.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107971.1696.1 >prot_M-pyrifera_M_contig107971.1696.1 ID=prot_M-pyrifera_M_contig107971.1696.1|Name=mRNA_M-pyrifera_M_contig107971.1696.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp MATAAMDAGDLAAADKQLGVLQLKFPGSQRVKRLQGMRSEAGGDFKAAGKback to top mRNA from alignment at M-pyrifera_M_contig107971:93..338+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107971.1696.1 ID=mRNA_M-pyrifera_M_contig107971.1696.1|Name=mRNA_M-pyrifera_M_contig107971.1696.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=246bp|location=Sequence derived from alignment at M-pyrifera_M_contig107971:93..338+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107971:93..338+ >mRNA_M-pyrifera_M_contig107971.1696.1 ID=mRNA_M-pyrifera_M_contig107971.1696.1|Name=mRNA_M-pyrifera_M_contig107971.1696.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig107971:93..338+ (Macrocystis pyrifera P11B4 male)back to top |