mRNA_M-pyrifera_M_contig107945.1694.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5K963_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K963_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.830e-47 Identity = 84/210 (40.00%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++AC ++ +A V + E Y+ + E D RG Y+HLK ++GL G +A +QF+ DE G LLR++ I +RW + LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDAII+ L+KK DRT+C Sbjct: 49 ARHAFKARPNAAT-WRILKAACKGVKATIATSVYDHLEGYVMKLEAIYQDRDMRGLYQHLKRSMGLSGRQAGGQQFVTDENGVLLRNKNAILKRWRRFFDTLLNSKSPTLNPDVVEQVTQRPATRATRRLAAVPDLEEVEVATKGLGNWKAVGPDLLAAELLKVDGDDEPIVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRTNC 257
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE) HSP 1 Score: 167 bits (422), Expect = 3.880e-44 Identity = 83/210 (39.52%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++ C ++ +A + + E Y+ E E D RG Y+HLK + GL G +A +QF+ DE G LLR++ I +RW ++ LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDAII+ LHKK DR++C Sbjct: 668 ARHSFKAGPNAAT-WRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLHKKGDRSNC 876
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5JEX7_9PHAE (Reverse transcriptase domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX7_9PHAE) HSP 1 Score: 165 bits (418), Expect = 8.230e-44 Identity = 84/210 (40.00%), Postives = 127/210 (60.48%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++AC ++ +A V + E Y+ E E D RG Y+HLK + GL G +A +QF+ DE G LLR++ I +RW ++ LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDAII+ L+KK DR++C Sbjct: 52 ARHGFKARPNAAT-WRILKAACKGVKATIATSVYDHLEGYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNC 260
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.410e-43 Identity = 82/210 (39.05%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++ C ++ +A + + E Y+ E E D RG Y+HLK + GL G +A +QF+ DE G LLR++ I +RW ++ LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDAII+ L+KK DR++C Sbjct: 381 ARHSFKAGPNAAT-WRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNC 589
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.510e-43 Identity = 82/210 (39.05%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++ C ++ +A + + E Y+ E E D RG Y+HLK + GL G +A +QF+ DE G LLR++ I +RW ++ LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDAII+ L+KK DR++C Sbjct: 872 ARHSFKAGPNAAT-WRILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFVEVWNGGEMPQEWKDAIIKVLYKKGDRSNC 1080
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5KQZ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ7_9PHAE) HSP 1 Score: 162 bits (410), Expect = 5.190e-43 Identity = 82/210 (39.05%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 4 ARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLS---LGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKLD---HPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 AR + P +T W+ L++AC ++ +A V + E Y+ E E D RG ++HLK + GL G +A +QF+ DE G LLR++ I +RW + LLN+KS ++P +++ + RP + L P ++E+ A KG+ NWKAVGPD L E+LK+D P ++ +I V VW GE+PQ+WKDA I+ L+ K DRT+C Sbjct: 436 ARHAFKARPNAAT-WRTLKAACKGVKATIATSVYDHLEGYVTELEAIYQDRDMRGLHQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKNAILKRWRRFFDTLLNSKSPTLNPDVVEQVTQRPATRAIRHLAAVPDLEEIEVATKGLGNWKAVGPDLLAAELLKVDGDDEPIVLERLRAIFVEVWNGGEMPQEWKDAFIKVLYNKGDRTNC 644
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5L012_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L012_9PHAE) HSP 1 Score: 150 bits (380), Expect = 3.860e-42 Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 100 VNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLSLGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKL---DHPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 + +FE Y+ + EK DQ GFY+HLK + ++G ++ + Q I DE G +LRD IR+RWA +HKLLNTKS ID D + P + L + PS+ E+ EAV+ M+N KAVGPD LP E++KL ++ FH+I+V+VW TG+VPQQWKDA I+ L KK D C Sbjct: 39 LETFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLREVEEAVREMANRKAVGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMGC 212
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5JGC2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC2_9PHAE) HSP 1 Score: 152 bits (383), Expect = 4.120e-41 Identity = 81/175 (46.29%), Postives = 113/175 (64.57%), Query Frame = 1 Query: 100 VNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLSLGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKL---DHPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 + +FE Y+ + EK + DQ GFY+HLK + ++G ++ + Q I DE G +LRD IR+RWA +HKLLNTKS ID D + P + L + PS+ E+ EAV+ M+N KAVGPD LP E++KL ++ FH+I+V+VW TG+VPQQWKDA I+ L KK D +C Sbjct: 189 LETFFEGYVRQLEKKRRAGDQAGFYRHLKM-IDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMANRKAVGPDNLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMEC 362
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.080e-40 Identity = 86/197 (43.65%), Postives = 119/197 (60.41%), Query Frame = 1 Query: 34 DSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLSLGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKL---DHPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 ++T KL++A + +FE Y+ + EK DQ GFY+HLK + ++G + + Q I DE G +LRD R+RWA +HKLLNTKS ID D + P + L + PS+ E+ EAV+GM+N KAVGPD LP E++KL F++ FH+I+V+VW TG VPQQWKDA I+ L KK D +C Sbjct: 228 ETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMEC 423
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE) HSP 1 Score: 156 bits (394), Expect = 2.140e-40 Identity = 86/197 (43.65%), Postives = 119/197 (60.41%), Query Frame = 1 Query: 34 DSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTSSDQRGFYKHLKSTVGLQGTKARSEQFIMDEGGTLLRDQARIRERWAGHYHKLLNTKSLKIDPTIIDLMPPRPLKLSLGNEPSIDEMMEAVKGMSNWKAVGPDGLPVEVLKL---DHPAFVQYFHSILVNVWVTGEVPQQWKDAIIQTLHKKKDRTDC 615 ++T KL++A + +FE Y+ + EK DQ GFY+HLK + ++G + + Q I DE G +LRD R+RWA +HKLLNTKS ID D + P + L + PS+ E+ EAV+GM+N KAVGPD LP E++KL F++ FH+I+V+VW TG VPQQWKDA I+ L KK D +C Sbjct: 13 ETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKM-IDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVRGMANRKAVGPDDLPAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMEC 208 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107945.1694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107945.1694.1 >prot_M-pyrifera_M_contig107945.1694.1 ID=prot_M-pyrifera_M_contig107945.1694.1|Name=mRNA_M-pyrifera_M_contig107945.1694.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp DARQLLRVYPRDSTAWKKLRSACANLQEVVAAGVNAYFEEYLAETEKFLTback to top mRNA from alignment at M-pyrifera_M_contig107945:2..616- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107945.1694.1 ID=mRNA_M-pyrifera_M_contig107945.1694.1|Name=mRNA_M-pyrifera_M_contig107945.1694.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig107945:2..616- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107945:2..616- >mRNA_M-pyrifera_M_contig107945.1694.1 ID=mRNA_M-pyrifera_M_contig107945.1694.1|Name=mRNA_M-pyrifera_M_contig107945.1694.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig107945:2..616- (Macrocystis pyrifera P11B4 male)back to top |