mRNA_M-pyrifera_M_contig107909.1684.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: C3Y363_BRAFL (DUF4392 domain-containing protein (Fragment) n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y363_BRAFL) HSP 1 Score: 129 bits (324), Expect = 1.710e-31 Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLP--------VQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAE-------HMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRKY---STTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLD 558 G G++A+ + G VT+V D S L VQ GV L+ EG +A+ +P + D+DSA LQ L DH VA+ER GRA DGTYRTMKA+ + +L++P+D +F+ + TTGIGDGGNELGMG+V+EKV + + G EI VPAD+ +TAGVSNWGGWA+AA + +L Sbjct: 324 GPPGAVAMAAMLQALGKQVTMVMDASRLQLMRDIVEDCVQTGVCILK------EG------VAVLPYPPTNGTAPDRDSA-LQFLTHDGDVSRPRYDHLVAIERVGRAADGTYRTMKAQDIS-SLVSPIDQLFDVANEEIPGIKTTGIGDGGNELGMGRVQEKVHQFIPNGPEIACTVPADYTITAGVSNWGGWAVAAGLYVLQ 513
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: C3XU11_BRAFL (DUF4392 domain-containing protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XU11_BRAFL) HSP 1 Score: 127 bits (320), Expect = 6.900e-31 Identity = 81/196 (41.33%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAE-------HMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRKY---STTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLD 558 G G++A+ + G VT+V D S L ++ V++ + EG +++ +P + D+DSA LQ L DH VA+ER GRA DGTYRTM+A+ + +L++P+D +FE + TTGIGDGGNELGMG+V+EKV + + G EI V AD+ +TAGVSNWGGWA+AA + +L Sbjct: 349 GPPGAVAMAAMLQALGKQVTMVMDASRLQLMRDIVEDCVQTGVLKEG------VSVLPYPPTNGTAPDRDSA-LQFLTHDGDVSRPRYDHLVAIERVGRAADGTYRTMQAKDIS-SLVSPIDQLFEVANEEIPGIKTTGIGDGGNELGMGRVQEKVHQYITNGPEIACAVQADYTITAGVSNWGGWAVAAGLYVLQ 536
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: A0A8K0AC75_BRALA (C14orf159 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0AC75_BRALA) HSP 1 Score: 126 bits (317), Expect = 2.140e-30 Identity = 80/194 (41.24%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAE-------HMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGR--KYSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLL 555 G G++A+ + G VT+V D S L ++ V++ + G + +A+ +P D D++ A LQ L DH VA+ER GRA DGTYRTMKA+ + +L++P+D +F+ TTGIGDGGNELGMG V++KV + + G +I VPAD+ +TAGVSNWGGWA+AAA+ +L Sbjct: 401 GPPGAVAMAAMLQALGKQVTMVMDASRLQLMRDIVEDCV------QAGILKESVAVLPYPPTDGTTPDREVA-LQFLTHDGDLSRPRYDHLVAIERVGRAADGTYRTMKAKDIS-SLVSPIDQLFDLANEIPGIKTTGIGDGGNELGMGTVQDKVHQFITNGPDIACTVPADYTITAGVSNWGGWAIAAALYVL 586
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: A0A6P4Z679_BRABE (UPF0317 protein C14orf159 homolog, mitochondrial-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Z679_BRABE) HSP 1 Score: 124 bits (310), Expect = 1.900e-29 Identity = 78/195 (40.00%), Postives = 116/195 (59.49%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAE-------HMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRKY---STTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLL 555 G G++A+ + G VT+V D + L ++ V++ + G + +A+ +P + DK A LQ L DH VA+ER GRA DGTYR+MKA+ L +L++P+D +F+ + TTGIGDGGNELGMG++++KV + + G +I VPAD+ +TAGVSNWGGWA+AAA+ +L Sbjct: 396 GPPGAVAMAAMLQALGKQVTMVIDTNRLQLIRDIVEDCV------QAGILQEPVAVLPYPPTNGTVTDKQVA-LQFLTHDGDISRPRYDHLVAIERVGRAADGTYRSMKAKDLS-SLVSPIDQLFDVANEEIPGIKTTGIGDGGNELGMGRLQDKVHQFIPNGPQIACAVPADYTITAGVSNWGGWAIAAALYVL 582
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: L1IRF6_GUITC (DUF4392 domain-containing protein n=4 Tax=Guillardia theta TaxID=55529 RepID=L1IRF6_GUITC) HSP 1 Score: 117 bits (292), Expect = 1.950e-28 Identity = 77/196 (39.29%), Postives = 107/196 (54.59%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAE--HMDHWVAVERTGRAVDGTYRTMKARSLDRAL-IAPLDWVFEW---DGRKYSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLDPSLT 570 G G+LAI R + G V ++TD+ + P+ A +E R+ + G + + +FPGG S Q L E +D +A+ER G A DG Y TM+ R + ++ IA L+ +F DG+ T G+GDGGNE+GMGK + V V G +I V ADHL+ AGVSNWGGWALA A+ + S T Sbjct: 62 GPPGALAIARALMRMGKRVMLMTDEINREPIVAAEEEGRRSY-------GCDPVPVLSFPGG--------SVNAQELVESLELDCLIAIERAGPAEDGGYYTMRGRDMSLSVPIAKLESLFACTSKDGKSLVTIGVGDGGNEVGMGKRIKLVRAHVPLGDKIACTVKADHLIVAGVSNWGGWALALALMISQQSHT 242
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: W4GG48_9STRA (DUF4392 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GG48_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.710e-28 Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAEHMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRK-YSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLDPSLT 570 G++G+ A+ + RG V ++TDD + QA +D R + + ++ + TFP G +L+ +A + +W+A+ER G A DG Y TM+AR + R +A LD F+ + T IGDGGNELG+G V ++ + G I A P+DHLV A +S+WGG+A+ AA+ +DPSL+ Sbjct: 66 GIAGTFALVHMLHTRGCVVHILTDDVNASVFQACIDHWRNNYSCQA----DKNLQLHTFPPGPVA-----PPQLEAMAALIQYWIAIERPGEAADGRYYTMRARDISRD-VAHLDAFFDRAQQLGVRTLAIGDGGNELGLGGVATLTKQHIPHGDVIAAVTPSDHLVVASISDWGGYAICAAMAYIDPSLS 246
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: W4GHY5_9STRA (DUF4392 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GHY5_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.410e-27 Identity = 69/191 (36.13%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAEHMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRK-YSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLDPSLT 570 G++G+ A+ + RG V ++TDD + QA +D R + + ++ + TFP G +L+ +A + +W+A+ER G A DG Y TM+AR + R +A LD F+ + T IGDGGNELG+G V ++ + G I A P+DHLV A +S+WGG+A+ AA+ +DPSL+ Sbjct: 66 GIAGTFALVHMLHTRGCVVHILTDDVNASVFQACIDHWRNNYSCQA----DKNLQLHTFPPGPVA-----PPQLEAMAALIQYWIAIERPGEAADGRYYTMRARDISRD-VAHLDAFFDRAQQLGVRTLAIGDGGNELGLGGVATLTKQHIPHGDVIAAVTPSDHLVVASISDWGGYAICAAMAYIDPSLS 246
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: A0A7S2TVA8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TVA8_9EUKA) HSP 1 Score: 113 bits (282), Expect = 3.080e-27 Identity = 75/190 (39.47%), Postives = 102/190 (53.68%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAEHMDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVFEWDGRK-YSTTGIGDGGNELGMGKVKEKV-EEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLLDPS 564 G G++AIGR C G +VTD + ++A ++ I FP G + + +L+ L DH VA+ER G +DG Y TM+A+ + L+APL+ V +K TTGIGDGGNE+GMGKV++KV V G+ I V HL+T VSNWGG+ALAAA+GL S Sbjct: 92 GPPGAVAIGRACTRLGKTACIVTDTVNYPVLKAAAEDTH--------------IECIHFPPGSKWGA-AEREKLEKLINSADHVVAIERAGPGIDGRYYTMRAKDMTH-LVAPLERVVLGAMQKGIDTTGIGDGGNEVGMGKVRQKVIASSVPDGERIACTVSTTHLLTCSVSNWGGYALAAAMGLASSS 265
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: UPI000496ADA0 (UPF0317 protein C14orf159 homolog, mitochondrial n=1 Tax=Stegastes partitus TaxID=144197 RepID=UPI000496ADA0) HSP 1 Score: 116 bits (291), Expect = 6.470e-27 Identity = 81/194 (41.75%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAEH-------MDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVF--EWDGRKYSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLL 555 G G++AI + L G VT++TD ++ QA +DE + + T P D DSA L L H DH +A+ER+GRA DG Y M+A ++ + L+ P+D +F D STTGIGDGGNELGMGKVKEKV++ + G I VPAD +TAGVSNWGG+A+A + LL Sbjct: 374 GPPGAIAIATMLLALGKKVTMLTDKRAVEMNQALIDEAVS-----------TGVLKTTIPLVTYEDSGPDSA-LHFLCHHGDPSKPRYDHLLAIERSGRAADGNYYNMRAINI-KHLVDPIDDLFIAAKDIPGISTTGIGDGGNELGMGKVKEKVKDLMPKGSLIACDVPADFAITAGVSNWGGYAVACGLYLL 554
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Match: A0A8C4DY53_DICLA (D-glutamate cyclase n=8 Tax=Moronidae TaxID=42148 RepID=A0A8C4DY53_DICLA) HSP 1 Score: 116 bits (290), Expect = 9.270e-27 Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 1 Query: 1 GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGESDIAMETFPGGDSFDDDKDSARLQTLAEH-------MDHWVAVERTGRAVDGTYRTMKARSLDRALIAPLDWVF--EWDGRKYSTTGIGDGGNELGMGKVKEKVEEGVEFGKEICAHVPADHLVTAGVSNWGGWALAAAVGLL 555 G G++A+ + L G VT+VTD +L QA +DE ++ G +S + + TF D DSA L L H DH VA+ER+GRA DG Y M+ ++ + L+ P+D +F D R +TTGIGDGGNELGMGKVKE+V+ + G + VPAD+ +TAGVSNWGG+A+A + LL Sbjct: 361 GPPGAIAMATMLLSLGKQVTMVTDRRALDMNQAIIDEAVRK------GVLKSAVPLVTFE-----DRGPDSA-LHFLCHHGDPSKPRYDHLVAIERSGRAGDGNYYNMRGVNI-KHLVDPIDDLFIAAKDIRGITTTGIGDGGNELGMGKVKERVKTLMPNGSLVACDVPADYAITAGVSNWGGYAVACGLYLL 541 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107909.1684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107909.1684.1 >prot_M-pyrifera_M_contig107909.1684.1 ID=prot_M-pyrifera_M_contig107909.1684.1|Name=mRNA_M-pyrifera_M_contig107909.1684.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp GLSGSLAIGRLCLVRGIHVTVVTDDSSLLPVQAGVDELRKQWERGEGGGGback to top mRNA from alignment at M-pyrifera_M_contig107909:1..570+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107909.1684.1 ID=mRNA_M-pyrifera_M_contig107909.1684.1|Name=mRNA_M-pyrifera_M_contig107909.1684.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig107909:1..570+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107909:1..570+ >mRNA_M-pyrifera_M_contig107909.1684.1 ID=mRNA_M-pyrifera_M_contig107909.1684.1|Name=mRNA_M-pyrifera_M_contig107909.1684.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig107909:1..570+ (Macrocystis pyrifera P11B4 male)back to top |