mRNA_M-pyrifera_M_contig1079.1679.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1079.1679.1 vs. uniprot
Match: D7FNM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM3_ECTSI) HSP 1 Score: 121 bits (304), Expect = 2.170e-26 Identity = 119/320 (37.19%), Postives = 164/320 (51.25%), Query Frame = 1 Query: 22 DQNH--NKARAYFMLAAGGRVVRSHHYLDASNNNNRLMVPTEKELKTILYDQTGARVTAHNHR--ENIDYVALHADRRPMRATRMTEGFEREGRQVAGSATTESPCGERRPTNPYRKFAPNPPKGTYNGHRLVGTDDNSVQQKVFSVFLGSLSAIGVTMADTAQAME--VTPDSQPS--CQEHAPGK-QTHISEATTS--AEAAYELSKPLAQVDVYSILSKARPAETRNGPSGAEVAG-----NPKLPTR---RKNKRFRISTQREEKA---GGGEQRLIEAEPTLKM-----AYLARDPLGDEVADLDAKLQENARRL 900 D NH +K R + L GGRVVR +H DA N R +VPTE ELKTILYDQT AR + HR +NID+VALHA+RRP R G E R S + GE RP + + +R +S +++ S+FL S SA + A A++ VT S P+ C + + Q +EA + + E+SKPLA++D+YSIL+KA P R+ S V G +P + + +++KR + S +R + GG E+ E L YL RDPLGDEVA+L AKLQE+ R + Sbjct: 6 DVNHQDHKPRTKYFLTVGGRVVRVNHDPDAGN---RQIVPTEDELKTILYDQTDARNRGNGHRRRDNIDFVALHANRRPRRKG-SKNGVENNQRTYENSNSPVGVNGEDRPHIRRERGIKSDRCLRPKANRPSPKHHDSGEEEDVSLFLDSFSASEMPGQHPAAAVQTAVTLQSPPTSLCLDDGVLEGQARKAEAVVADTTQTTMEMSKPLAKIDLYSILAKAPPVAPRSTASHRPVDGIGCSVDPTMSNKAGMKRHKREQGSLRRLASSVVVGGDERPAFETALRLNPREEVGGYLKRDPLGDEVAELTAKLQESLRSI 321 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1079.1679.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1079.1679.1 >prot_M-pyrifera_M_contig1079.1679.1 ID=prot_M-pyrifera_M_contig1079.1679.1|Name=mRNA_M-pyrifera_M_contig1079.1679.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=644bp MFRPLRTDQNHNKARAYFMLAAGGRVVRSHHYLDASNNNNRLMVPTEKELback to top mRNA from alignment at M-pyrifera_M_contig1079:11359..15984+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1079.1679.1 ID=mRNA_M-pyrifera_M_contig1079.1679.1|Name=mRNA_M-pyrifera_M_contig1079.1679.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4626bp|location=Sequence derived from alignment at M-pyrifera_M_contig1079:11359..15984+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1079:11359..15984+ >mRNA_M-pyrifera_M_contig1079.1679.1 ID=mRNA_M-pyrifera_M_contig1079.1679.1|Name=mRNA_M-pyrifera_M_contig1079.1679.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3864bp|location=Sequence derived from alignment at M-pyrifera_M_contig1079:11359..15984+ (Macrocystis pyrifera P11B4 male)back to top |