mRNA_M-pyrifera_M_contig1079.1678.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: D7FNM1_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM1_ECTSI) HSP 1 Score: 110 bits (274), Expect = 4.420e-29 Identity = 50/55 (90.91%), Postives = 53/55 (96.36%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 KEEQRLCVVCQENER VLLLPCRHLCVCRGCSERQEL LCPLCR++ITE+LVVYS Sbjct: 135 KEEQRLCVVCQENERSVLLLPCRHLCVCRGCSERQELTLCPLCRDHITESLVVYS 189
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A7S4DHZ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHZ0_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 9.550e-19 Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 4 EEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 +EQ CV+CQEN + +L+LPCRHLC+C+ CSE LK CPLCRN+I ETL V+S Sbjct: 147 DEQNQCVICQENAKSILILPCRHLCLCQSCSENPRLKSCPLCRNDIKETLQVFS 200
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A7S2G914_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G914_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.020e-17 Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 + EQRLCVVCQE E+ L+LPCRHLC+C+ CS R ELK CPLCR I + + VY+ Sbjct: 144 EREQRLCVVCQEREKSCLILPCRHLCLCKDCSRRSELKSCPLCRKPIEQKIDVYA 198
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A7S2C4Y0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C4Y0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 1.390e-17 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 + +QRLCV+CQENE+ LLLPCRHLC+C+ CS R+EL CPLCR I + + V++ Sbjct: 126 ERDQRLCVICQENEKNTLLLPCRHLCLCKECSRREELDKCPLCRKGIDQKIDVFA 180
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A482S6W3_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6W3_9ARCH) HSP 1 Score: 79.3 bits (194), Expect = 1.450e-17 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 ++EQRLCV+CQENE+ V+LLPCRHLC+C GCS L +CPLCR I + V+S Sbjct: 83 QKEQRLCVICQENEKTVVLLPCRHLCLCDGCSVHSALDMCPLCREAIVHKISVFS 137
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A482S078_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S078_9ARCH) HSP 1 Score: 76.3 bits (186), Expect = 3.690e-17 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 7 EQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVY 162 +QRLC +C E++R VLL+PCRHLC+C CSE+ L+LCP+CRN I E + V+ Sbjct: 13 QQRLCTICMEDDRTVLLMPCRHLCLCSKCSEQSMLQLCPICRNRIQEKVTVF 64
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A7S3H223_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H223_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.090e-16 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 ++EQR+CVVCQE+E+ V+LLPCRHLCVC CS LK+CPLCR I + V+S Sbjct: 80 QKEQRVCVVCQEHEKSVVLLPCRHLCVCDVCSTHDLLKMCPLCREPIAHKISVFS 134
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A7S3XJT7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJT7_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 3.310e-15 Identity = 30/53 (56.60%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 4 EEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVY 162 E +CVVCQE+ + VL+LPCRHLC+C+GCSE Q L+ CPLCR NI + + Sbjct: 125 EASTVCVVCQEHAKSVLILPCRHLCLCQGCSENQLLRTCPLCRENIESKIQTF 177
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: M4BY57_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BY57_HYAAE) HSP 1 Score: 73.2 bits (178), Expect = 3.450e-15 Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETLVVYS 165 + E +LCV+C NE+ +L LPCRHLC+C C+ RQE+ CP+CR I E L VYS Sbjct: 79 QNELKLCVICLANEKRILCLPCRHLCLCETCAYRQEVTKCPICRLEIAEVLAVYS 133
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Match: A0A4W6D907_LATCA (RING-type domain-containing protein n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6D907_LATCA) HSP 1 Score: 72.0 bits (175), Expect = 3.530e-15 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSE--RQELKLCPLCRNNITETLVVY 162 +EE++ CVVCQ+ + VLLLPCRHLC+CR C++ Q + CPLCR NIT+TL V+ Sbjct: 36 QEERKKCVVCQDLSKTVLLLPCRHLCLCRHCADILTQRRRCCPLCRQNITQTLDVF 91 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1079.1678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1079.1678.1 >prot_M-pyrifera_M_contig1079.1678.1 ID=prot_M-pyrifera_M_contig1079.1678.1|Name=mRNA_M-pyrifera_M_contig1079.1678.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp KEEQRLCVVCQENERGVLLLPCRHLCVCRGCSERQELKLCPLCRNNITETback to top mRNA from alignment at M-pyrifera_M_contig1079:438..1210- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1079.1678.1 ID=mRNA_M-pyrifera_M_contig1079.1678.1|Name=mRNA_M-pyrifera_M_contig1079.1678.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=773bp|location=Sequence derived from alignment at M-pyrifera_M_contig1079:438..1210- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1079:438..1210- >mRNA_M-pyrifera_M_contig1079.1678.1 ID=mRNA_M-pyrifera_M_contig1079.1678.1|Name=mRNA_M-pyrifera_M_contig1079.1678.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig1079:438..1210- (Macrocystis pyrifera P11B4 male)back to top |