mRNA_M-pyrifera_M_contig107873.1670.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A8J9S4B7_9CHLO (Acyl-CoA-binding domain-containing protein 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S4B7_9CHLO) HSP 1 Score: 87.4 bits (215), Expect = 7.290e-17 Identity = 47/130 (36.15%), Postives = 68/130 (52.31%), Query Frame = 1 Query: 13 GASPSCRWGHSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGG 402 G P+CR GHSAT++G + + GG S+ +P+ E VL + S W R TSG P R H++ +R VV G G + Y D+ L+ +T W +T G PP R GH+ L+ D ++GG Sbjct: 275 GTPPTCRGGHSATLVGSNVYIFGGEDSSR-RPMGELLVLDLVSMAWVRPDTSGLPPAARSAHTALAYKNRFLVVF---GGGSVANCYNDVTLLDTKTNEWSCPQTEGTPPTPRAGHAAALLGDRLYIVGG 400
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A7S1Z436_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z436_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.170e-15 Identity = 52/159 (32.70%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 4 TQKGASPSCRWGHSATVL----------------GPFLVVVGGRVGSKPQPLNEAFVLHVPS----CTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTA--IVLGGYDGR 414 T G P R GH+AT+ G + V+GG +GS P ++ VL + W + P GT P HS+ +PSR V + GG+G Y DLH+L++ T+TWR VETTG P +R HS+ ++++ + GG++G+ Sbjct: 113 TVGGTPPPGRNGHTATLATSNRDGTNPNPNDEDDGARIFVIGGWLGSGPLAASDMHVLDISGGLEGLRWYQPPVRGTPPGPCNMHSADFVPSRNEVYVFRGGNG--REYLNDLHALDVNTYTWRNVETTGASPQQRANHSSAVLDELEELFIFGGWNGK 269
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A7S2HWT1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HWT1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 6.400e-14 Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 1 Query: 67 LVVVGGRVGSKPQPLNEAFVLH----VPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTA--IVLGGYDGR 414 + V+GG +GS P ++ VL V W + P GT P HS+ +P+R V + GG+G Y DLH+L++ T+TWR VETTG P +R HS+ ++ + + GG++G+ Sbjct: 152 IFVIGGWLGSGPLAASDMHVLDISGGVEGLRWYQPPVRGTPPGPCNMHSADFVPTRNEVYVFRGGNG--REYLNDLHALDVNTYTWRAVETTGAAPQQRANHSSAVLEELEELFIFGGWNGK 271
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: F0Y0Z0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0Z0_AURAN) HSP 1 Score: 79.0 bits (193), Expect = 7.490e-14 Identity = 50/151 (33.11%), Postives = 74/151 (49.01%), Query Frame = 1 Query: 13 GASPSCRWGHSATVLGP-FLVVVGGRVGSK-PQPLNEAFVLHVPSCTWQRFPTSGTAPKN----------------RYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAI-VLGGYD 408 GA+P+ RW H+A + ++V GG K + N+ ++ S W + P + T P R H+S L+ S + GG G R +ADLHSL++ET W +VETTGEPP R GH + D + V+GG++ Sbjct: 64 GAAPAPRWHHTAHMYNDRTMLVFGGFSADKVSRYFNDLWLYDTKSEKWSQPPPAETVPDQSGLPSLKRPWAGVPQPRGAHASTLVGSALMIFGGYGGSGFSRRDFADLHSLDMETMEWEEVETTGEPPEARSGHQLLSIEDRQLYVMGGWN 214
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A0V0YHT4_TRIPS (Kelch domain-containing protein 3 (Fragment) n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V0YHT4_TRIPS) HSP 1 Score: 74.7 bits (182), Expect = 1.300e-12 Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 1 Query: 40 HSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGG--------HGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGGYDG 411 H+ V G +++ GG V Q N+ F+L + + W++ +GT P R H++ ++ R V GG H RY DL L+L T+TW +V+TTGE P R HS + + GGY+G Sbjct: 183 HTCCVYGSMMIIFGGFVEYTQQFSNDVFILDLDTFIWRKPNVTGTPPIWRDFHTATVIGDRMYVF---GGRSDEAAPYHSNVERYPTDLFYLDLSTFTWHEVQTTGERPTGRRSHSAWEHSGCLYIFGGYNG 311
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A8J4G1R6_9CHLO (ACB domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4G1R6_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 1.380e-12 Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 1 Query: 1 PTQKGASPSCRWGHSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGG 402 P G +P+ R GH+AT+LG L ++GG ++ + L++ VL + + TW SG AP R +SC + ++ GG G + ++DL L+ + TW Q+ G R GHS ++ D ++GG Sbjct: 252 PEASGQAPTSRGGHTATLLGNKLWIIGGEDSAR-RALSDVHVLDLETMTWSTPQISGKAPLGR--SASCATSLQDRYIILFGG-GSVATCFSDLQMLDTQELTWSQLAQAGAKVTPRAGHSGAVLGDIWYIVGG 381
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A7S0N5L7_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N5L7_9CHLO) HSP 1 Score: 75.1 bits (183), Expect = 1.390e-12 Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = 1 Query: 4 TQKGASPSCRWGHSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRY-----GHSSCLLPSRTAVVLCLGGHGGRSRYYA---DLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGG 402 T G P R+ H+ ++G L+VVGG S + ++ VL + + TW R TSG + + GH S+ VL +GGH RS + ++ LN + +TW +ET GE P R GHS + DT +V GG Sbjct: 154 TLSGKRPRPRYQHATVIVGNSLLVVGGN--SWGRYFSDTQVLDLDTFTWSRAETSGASTSSSALPPCAGHKLVTWASK---VLLVGGHAKRSDLPSAKLEVRVLNADNFTWTVMETNGEAPSARGGHSAAVFGDTLVVFGG 289
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: D8TZR5_VOLCA (ACB domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TZR5_VOLCA) HSP 1 Score: 74.3 bits (181), Expect = 2.530e-12 Identity = 42/134 (31.34%), Postives = 68/134 (50.75%), Query Frame = 1 Query: 1 PTQKGASPSCRWGHSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGG 402 P G +PS R GH+AT+LG L V+GG ++ + L++ VL + + +W SG AP R +SC + ++ GG G + ++DLH L+ TW Q+ G R GH+ ++ ++GG Sbjct: 254 PVTSGQAPSARGGHTATLLGNKLWVIGGEDSAR-RALSDVHVLDLDTLSWSTPEISGKAPLGR--SASCATAHQDRYIVIFGG-GSVATCFSDLHMLDTHELTWTQLAQAGAKVTPRAGHAGAVLGGIWYIVGG 383
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: D8SE67_SELML (Uncharacterized protein n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SE67_SELML) HSP 1 Score: 70.9 bits (172), Expect = 4.850e-12 Identity = 43/123 (34.96%), Postives = 61/123 (49.59%), Query Frame = 1 Query: 55 LGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGGHGGRS-----RYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGGYD 408 +G L V GG G+ L++ FVL + TW + G P R GHS+ L+ V GG G S YY DLH LN+ T+ W+++ TTG P R H+ + + +V+GG D Sbjct: 3 VGSKLYVFGGTNGTST--LDDLFVLDNATNTWGKPDVFGDVPAPREGHSASLIGDNLFVF---GGCGKSSDPSEEEYYNDLHVLNMNTFVWKKISTTGVSPIPRDSHTCSSYKNCFVVMGGED 120
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Match: A0A0V1MVF4_9BILA (Kelch domain-containing protein 3 (Fragment) n=2 Tax=Trichinella TaxID=6333 RepID=A0A0V1MVF4_9BILA) HSP 1 Score: 73.2 bits (178), Expect = 5.700e-12 Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 1 Query: 40 HSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWQRFPTSGTAPKNRYGHSSCLLPSRTAVVLCLGG--------HGGRSRYYADLHSLNLETWTWRQVETTGEPPCKRCGHSTTLVNDTAIVLGGYDG 411 H+ V G +++ GG V Q N+ F+L + + W++ +GT P R H++ ++ R V GG H RY DL L+L T+ W +V+TTGE P R HS + + GGY+G Sbjct: 185 HTCCVYGNMMIIFGGFVEYTQQFSNDVFILDLDTFIWRKPNVTGTPPVWRDFHTATVIGDRMYVF---GGRSDEAAPYHSNVERYPTDLFYLDLSTFKWHEVQTTGERPTGRRSHSAWEYSGCLYIFGGYNG 313 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107873.1670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107873.1670.1 >prot_M-pyrifera_M_contig107873.1670.1 ID=prot_M-pyrifera_M_contig107873.1670.1|Name=mRNA_M-pyrifera_M_contig107873.1670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp PTQKGASPSCRWGHSATVLGPFLVVVGGRVGSKPQPLNEAFVLHVPSCTWback to top mRNA from alignment at M-pyrifera_M_contig107873:31..612- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107873.1670.1 ID=mRNA_M-pyrifera_M_contig107873.1670.1|Name=mRNA_M-pyrifera_M_contig107873.1670.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig107873:31..612- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107873:31..612- >mRNA_M-pyrifera_M_contig107873.1670.1 ID=mRNA_M-pyrifera_M_contig107873.1670.1|Name=mRNA_M-pyrifera_M_contig107873.1670.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig107873:31..612- (Macrocystis pyrifera P11B4 male)back to top |