mRNA_M-pyrifera_M_contig10784.1663.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A7J6DME8_CANSA (Rhodanese domain-containing protein n=5 Tax=Cannabis sativa TaxID=3483 RepID=A0A7J6DME8_CANSA) HSP 1 Score: 165 bits (418), Expect = 1.560e-43 Identity = 95/205 (46.34%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 154 QAHKDVVAALCEDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 Q+ D L + K+ VLLD RN+YET IG F A VE LDP RQ+S LP W+DEN D LRGK VLMYCTGG+RCEMASA LR + AG E V QL GGI+RYLE YP D FF+GKNFVFD R+SV + +G C+LCR P+DDY SR RCT Sbjct: 170 QSLDDDSPTLTDSKQLVLLDARNLYETRIGKFHAPNVETLDPGIRQYSDLPSWIDENTDDLRGKSVLMYCTGGIRCEMASAYLR----SKGAGFENVFQLFGGIQRYLEQYP---------------------------------------------DGGFFKGKNFVFDHRMSVGSSDTN--ILGTCLLCRLPFDDYSSRLRCT 323
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A803PW75_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PW75_CANSA) HSP 1 Score: 165 bits (418), Expect = 7.420e-43 Identity = 95/205 (46.34%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 154 QAHKDVVAALCEDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 Q+ D L + K+ VLLD RN+YET IG F A VE LDP RQ+S LP W+DEN D LRGK VLMYCTGG+RCEMASA LR + AG E V QL GGI+RYLE YP D FF+GKNFVFD R+SV + +G C+LCR P+DDY SR RCT Sbjct: 683 QSLDDDSPTLTDSKQLVLLDARNLYETRIGKFHAPNVETLDPGIRQYSDLPSWIDENTDDLRGKSVLMYCTGGIRCEMASAYLR----SKGAGFENVFQLFGGIQRYLEQYP---------------------------------------------DGGFFKGKNFVFDHRMSVGSSDTN--ILGTCLLCRLPFDDYSSRLRCT 836
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A6N2KVT1_SALVM (Rhodanese domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2KVT1_SALVM) HSP 1 Score: 154 bits (390), Expect = 2.790e-41 Identity = 86/197 (43.65%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 178 ALCEDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 +L EDK VLLD RN+YET IG F V+ LDP+ RQ+S LP W+D+N ++LRGK VLMYCTGG+RCEMASA +R + AG E V QL GGI+RYLE +P D FF+GKNFVFD R+SV + +G C+LC +DDY SR RC+ Sbjct: 159 SLAEDKGLVLLDARNLYETRIGKFDMPNVDTLDPRIRQYSDLPSWIDDNSEQLRGKNVLMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDTN--ILGTCLLCGLSFDDYSSRCRCS 304
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: V4TB23_CITCL (Rhodanese domain-containing protein n=6 Tax=Citrus TaxID=2706 RepID=V4TB23_CITCL) HSP 1 Score: 158 bits (400), Expect = 3.680e-41 Identity = 88/194 (45.36%), Postives = 108/194 (55.67%), Query Frame = 1 Query: 187 EDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 +DK+ VLLD RN+YET IG FR VE LDP+ RQFS LP W+D N ++L+GK VLMYCTGG+RCEMASA +R + AG E V QL GGI+RYLE +P D FF+GKNFVFD R+SV + A +G+C+LC +DDY SR RCT Sbjct: 155 DDKKLVLLDARNLYETRIGKFRTPSVETLDPEIRQFSDLPTWIDNNAEQLQGKHVLMYCTGGIRCEMASAYVR----SKGAGFENVFQLYGGIQRYLEQFP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDAD--IMGSCLLCGSSFDDYSSRCRCT 297
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A2G3AWW3_CAPCH (Rhodanese-like domain-containing protein 6 n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3AWW3_CAPCH) HSP 1 Score: 154 bits (389), Expect = 5.020e-41 Identity = 84/192 (43.75%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 190 DKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTEVLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 DK VL+D RN+YET IG F VE LDP+ RQ+S LP W+D N ++LRG +LMYCTGG+RCEMASA +R D V QL GGI+RYLE +P D FFRGKNFVFD RVSV + + G C+LC P+DDY SR+RCT Sbjct: 157 DKGTVLIDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIRSKGDGYE---NVFQLYGGIQRYLEQFP---------------------------------------------DGGFFRGKNFVFDHRVSVGSSDS--RIWGTCLLCSSPFDDYSSRTRCT 298
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A5C7I8A8_9ROSI (Rhodanese domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7I8A8_9ROSI) HSP 1 Score: 157 bits (398), Expect = 7.600e-41 Identity = 87/194 (44.85%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 187 EDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 +DKE VLLD RN+YET IG F +E LDP RQ+S LP W+DEN ++LRGK +LMYCTGG+RCEMASA +R + AG E V QL GGI+RYLE YP D FF+GKNFVFD R+SV + +G+C+LC +DDY SR RCT Sbjct: 162 DDKELVLLDARNLYETRIGKFHTPSMETLDPSIRQYSDLPSWIDENAEQLRGKHILMYCTGGIRCEMASAYVR----SKGAGFENVFQLYGGIQRYLEQYP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDEN--ILGSCLLCGSFFDDYSSRCRCT 304
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: UPI000B775A82 (rhodanese-like domain-containing protein 6 isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B775A82) HSP 1 Score: 153 bits (386), Expect = 1.010e-40 Identity = 84/189 (44.44%), Postives = 103/189 (54.50%), Query Frame = 1 Query: 202 VLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 V+LD RN+YET IG F VE LDP+ RQ+S LP W+D+N ++LRGKRVLMYCTGG+RCEMASA +R G E V QL GGI+RYLE +P D FF+GKNFVFD R+SV + A +G C+LC P+DDY SR RC+ Sbjct: 163 VVLDARNLYETRIGKFHMPNVETLDPEIRQYSDLPSWIDDNSEQLRGKRVLMYCTGGIRCEMASAYIRSR----GVGFENVFQLFGGIQRYLEQFP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDAN--ILGTCLLCDMPFDDYSSRCRCS 300
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: UPI001262D45B (rhodanese-like domain-containing protein 6 isoform X1 n=6 Tax=Pistacia vera TaxID=55513 RepID=UPI001262D45B) HSP 1 Score: 157 bits (396), Expect = 1.440e-40 Identity = 87/194 (44.85%), Postives = 105/194 (54.12%), Query Frame = 1 Query: 187 EDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 E ++ VLLD RN+YET IG F VE LDP+ RQ+S LP W+D N ++LRGK VLMYCTGG+RCEMASA LR + G E V QL GGI+RYLE +P D FF+GKNFVFD R+SV + A +GNC+LC +DDY SR RCT Sbjct: 160 ESEKLVLLDARNLYETRIGKFHTQSVETLDPEIRQYSDLPSWIDNNAEKLRGKNVLMYCTGGIRCEMASAYLR----SKGVGFENVFQLYGGIQRYLEQFP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDAD--IMGNCLLCGSSFDDYSSRCRCT 302
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A1S4CFD8_TOBAC (rhodanese-like domain-containing protein 6 n=1 Tax=Nicotiana tabacum TaxID=4097 RepID=A0A1S4CFD8_TOBAC) HSP 1 Score: 153 bits (386), Expect = 1.470e-40 Identity = 84/189 (44.44%), Postives = 103/189 (54.50%), Query Frame = 1 Query: 202 VLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 VL+D RN+YET IG F VE LDP+ RQ+S LP W+D N ++LRG +LMYCTGG+RCEMASA +R + AG E V QL GGI+RYLE +P D FF+GKNFVFD RVSV + + +G C+LC P+DDY SRSRCT Sbjct: 164 VLMDARNLYETRIGKFYTPNVETLDPEIRQYSDLPSWIDNNSEKLRGNNILMYCTGGIRCEMASAYIR----SKGAGFENVFQLYGGIQRYLEQFP---------------------------------------------DGGFFKGKNFVFDHRVSVGSSDS--RILGTCLLCNSPFDDYSSRSRCT 301
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Match: A0A2P2LGP6_RHIMU (Uncharacterized protein MANES_08G110000 n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LGP6_RHIMU) HSP 1 Score: 157 bits (396), Expect = 1.560e-40 Identity = 88/197 (44.67%), Postives = 109/197 (55.33%), Query Frame = 1 Query: 178 ALCEDKEAVLLDVRNVYETSIGHFRADGVERLDPKTRQFSQLPKWVDENVDRLRGKRVLMYCTGGVRCEMASALLRQHCDADSAGTE-VLQLSGGIERYLEAYPSKEADASSKNGERGLGKGDAFEGCVETAGVSTRAVVEAGRWKEQEDESFFRGKNFVFDERVSVPENPAGGTAVGNCILCRRPWDDYGSRSRCT 765 AL ++K VLLD RN+YET IG F A VE LDP+ RQ+S L W+D+N ++LRGKRVLMYCTGG+RCEMASA +R + AG E V QL GGI+RYLE YP D FF+GKNFVFD R+SV + +G+C+LC +DDY SR RC+ Sbjct: 164 ALTDNKGLVLLDARNIYETRIGKFHAHTVETLDPRIRQYSDLASWIDDNAEQLRGKRVLMYCTGGIRCEMASAYVR----SKGAGFENVFQLYGGIQRYLEQYP---------------------------------------------DGGFFKGKNFVFDHRISVGSSDTN--ILGSCLLCGVSFDDYSSRCRCS 309 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10784.1663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10784.1663.1 >prot_M-pyrifera_M_contig10784.1663.1 ID=prot_M-pyrifera_M_contig10784.1663.1|Name=mRNA_M-pyrifera_M_contig10784.1663.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=256bp RLYREGKSAGGEDGAGAGAQLSSPGIPGRGGTEGVSIECSEKAGKGDGGEback to top mRNA from alignment at M-pyrifera_M_contig10784:252..3828+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10784.1663.1 ID=mRNA_M-pyrifera_M_contig10784.1663.1|Name=mRNA_M-pyrifera_M_contig10784.1663.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3577bp|location=Sequence derived from alignment at M-pyrifera_M_contig10784:252..3828+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10784:252..3828+ >mRNA_M-pyrifera_M_contig10784.1663.1 ID=mRNA_M-pyrifera_M_contig10784.1663.1|Name=mRNA_M-pyrifera_M_contig10784.1663.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1536bp|location=Sequence derived from alignment at M-pyrifera_M_contig10784:252..3828+ (Macrocystis pyrifera P11B4 male)back to top |