mRNA_M-pyrifera_M_contig107800.1658.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: F0YFV5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFV5_AURAN) HSP 1 Score: 69.7 bits (169), Expect = 2.640e-11 Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVP----DAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARS-----ITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAGEAS 381 I+SL+ + Y++ V A G S P +T P++ P AP+ V+ G L + + P +DGG+ + +Y+VEWD S +F S + S + AS YTI+ L++ +TYYVRV INA G G AS Sbjct: 14770 ISSLTKGQEYYVRVSA----GNSQGYGTPQSTAPSSAAPYEESGAPSDVELGITSDSMLTIGYAYPADDGGDDVSSYRVEWDTSSSFNSLSASPHKGTVDVDASVAMSYTIDELTTSTTYYVRVLPINAAGYGTAS 14901
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A2D4BES8_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BES8_PYTIN) HSP 1 Score: 68.6 bits (166), Expect = 6.520e-11 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVA---VGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRS---DNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAG 372 I++L YF+ V A G GG S+ P + P T P APT V G L V+W P+++GG+ I Y V+WD S D+ G++A T + + YTI L+ G+ YYVRVFA+N+ G G Sbjct: 1983 ISNLVKGTFYFVRVKARNSQGFGGFQISS--PASLNPYT-TPSAPTKVTMGVTSSTMLTVQWNDPDDNGGDAISGYTVQWDISAGFDSIGATATKATITDVTQRSYTITLLTPGTVYYVRVFAMNSGGVG 2109
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A2D4CCQ8_PYTIN (Similar to titin isoform N2B putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCQ8_PYTIN) HSP 1 Score: 68.6 bits (166), Expect = 6.600e-11 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVA---VGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRS---DNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAG 372 I++L YF+ V A G GG S+ P + P T P APT V G L V+W P+++GG+ I Y V+WD S D+ G++A T + + YTI L+ G+ YYVRVFA+N+ G G Sbjct: 3338 ISNLVKGTFYFVRVKARNSQGFGGFQISS--PASLNPYT-TPSAPTKVTMGVTSSTMLTVQWNDPDDNGGDAISGYTVQWDISAGFDSIGATATKATITDVTQRSYTITLLTPGTVYYVRVFAMNSGGVG 3464
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A2D4CCD6_PYTIN (Similar to titin isoform N2B putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCD6_PYTIN) HSP 1 Score: 68.6 bits (166), Expect = 6.610e-11 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVA---VGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRS---DNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAG 372 I++L YF+ V A G GG S+ P + P T P APT V G L V+W P+++GG+ I Y V+WD S D+ G++A T + + YTI L+ G+ YYVRVFA+N+ G G Sbjct: 3776 ISNLVKGTFYFVRVKARNSQGFGGFQISS--PASLNPYT-TPSAPTKVTMGVTSSTMLTVQWNDPDDNGGDAISGYTVQWDISAGFDSIGATATKATITDVTQRSYTITLLTPGTVYYVRVFAMNSGGVG 3902
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: V6AS92_9ARCH (Uncharacterized protein n=2 Tax=Candidatus Nitrosotenuis uzonensis TaxID=1407055 RepID=V6AS92_9ARCH) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-10 Identity = 47/134 (35.07%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 1 ITSLSSSRPY-FINVVAVGLGG--VSSSA-VVPFATT------PTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAG 372 +T L++ Y F+ LGG +S+ A P +T+ PTT P PT + + PI +++ WTAP N+GG PI YK+E + D ++T + ++ T+Y+ GL++G+TYY +V AIN+ G G Sbjct: 587 VTGLTTGNTYTFVVSAYFTLGGSPISNEASATPLSTSTAPQSQPTTSPPGIPTGLSASPILPTQINLSWTAPSNNGGSPITGYKIEVRKGDG---QYETLTSTQNATTKYSHAGLTTGTTYYYKVSAINSAGIG 717
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A8K1FBC1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBC1_PYTOL) HSP 1 Score: 66.2 bits (160), Expect = 4.260e-10 Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVV-PFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARSITQSASSGT---EYTIEGLSSGSTYYVRVFAINARGAG 372 I++L Y++ V A G + P + P T P APT V G L V+W+ P++DGG+ I Y V+WD S F S + T++ + YTI L+ G+TYYVRV AIN+ GAG Sbjct: 4159 ISNLVKGTFYYVRVKAKNSQGYGQYQISSPTSLNPYT-TPSAPTQVLMGVTSSTMLTVQWSIPDDDGGDAISGYLVQWDISAGFDSLSAEATKAKITDVTQRSYTITLLTPGTTYYVRVSAINSGGAG 4285
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: UPI001CC3F09F (fibronectin type III domain-containing protein n=1 Tax=Ferruginibacter sp. KIS38-8 TaxID=2875540 RepID=UPI001CC3F09F) HSP 1 Score: 65.5 bits (158), Expect = 7.770e-10 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAGEAS 381 ++SL+++ Y + AV GV+ +A F T +P+AP + + + V WTAP GG Y V++ + F S SIT +SS I GL+ GSTYY RVFA+N G AS Sbjct: 403 LSSLTANTLYHSSAFAVNGAGVALAADASFTT-----LPNAPGIGTTDNVTNGGFTVHWTAPS--GGSASFTYSVDYSTDNTFQSGVSSITNISSSNLSQAISGLTPGSTYYARVFAVNTTGTSGAS 522
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: K3WLI2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLI2_GLOUD) HSP 1 Score: 65.5 bits (158), Expect = 7.800e-10 Identity = 45/127 (35.43%), Postives = 63/127 (49.61%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARSITQSASSGT---EYTIEGLSSGSTYYVRVFAINARGAG 372 I+SL + YF+ V A G + A+ P APT V G L V+W P++DGG+ + AY V+WD S +F S T++ T YTI L+ + Y+VRVFA+N G G Sbjct: 2006 ISSLVKGKFYFVRVKAKNSQGYGQYQISSPASLNPYTTPSAPTQVLLGVTSSTMLTVQWNVPDDDGGDAVTAYVVQWDISASFDSLGADATKAKIIDTTQRSYTITLLTPETVYFVRVFAVNTGGLG 2132
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A5D6XPZ3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPZ3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.020e-9 Identity = 45/127 (35.43%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRS---DNFGSSARSITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAG 372 I+SL YF+ V A G + A+ P APT V G L V+W P++DGG+ I AY V+WD S D+ G+ A + + ++ YTI L+ + Y+VRV A+NA G G Sbjct: 7067 ISSLVKGSFYFVRVKAANSQGYGQYQISSPASLNPYTTPSAPTKVALGVTCSTMLTVQWDKPDDDGGDTITAYVVQWDISASFDSLGAEATKVKIADTAQRSYTITLLTPDTVYFVRVLAMNAGGLG 7193
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Match: A0A8J2SQT3_9STRA (Hypothetical protein n=13 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQT3_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.030e-9 Identity = 48/136 (35.29%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 1 ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVP----DAPTLVQSGPIGREALHVRWTAPENDGGEPIHAYKVEWDRSDNFGSSARS-----ITQSASSGTEYTIEGLSSGSTYYVRVFAINARGAGEAS 381 ++ L + Y++ V A G + P + P++ P AP+ V G L + + PE+DGG+ I AY+VEWD S +F S + S + A+ YTI+ LS +TYYV+V AINA G G AS Sbjct: 18481 VSGLDKGQRYYVRVSACNGQGCGT----PQGSAPSSAAPYEESGAPSNVVLGVTSDSMLTLGYGYPEDDGGDSITAYRVEWDTSSSFNSLSASPHKGTVDVDATVALSYTIDELSPSTTYYVKVSAINAAGYGAAS 18612 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107800.1658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107800.1658.1 >prot_M-pyrifera_M_contig107800.1658.1 ID=prot_M-pyrifera_M_contig107800.1658.1|Name=mRNA_M-pyrifera_M_contig107800.1658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp ITSLSSSRPYFINVVAVGLGGVSSSAVVPFATTPTTRVPDAPTLVQSGPIback to top mRNA from alignment at M-pyrifera_M_contig107800:7..387+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107800.1658.1 ID=mRNA_M-pyrifera_M_contig107800.1658.1|Name=mRNA_M-pyrifera_M_contig107800.1658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=381bp|location=Sequence derived from alignment at M-pyrifera_M_contig107800:7..387+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107800:7..387+ >mRNA_M-pyrifera_M_contig107800.1658.1 ID=mRNA_M-pyrifera_M_contig107800.1658.1|Name=mRNA_M-pyrifera_M_contig107800.1658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig107800:7..387+ (Macrocystis pyrifera P11B4 male)back to top |