mRNA_M-pyrifera_M_contig107792.1656.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A2D5ZSJ9_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2D5ZSJ9_9BACT) HSP 1 Score: 120 bits (301), Expect = 1.560e-28 Identity = 63/160 (39.38%), Postives = 89/160 (55.62%), Query Frame = 1 Query: 1 GVEWVHRRAAEKVTAEFSSVRGDWHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALL 480 GVEWV R AE+ E + W ++P+P+ R+R +++ P +S T+A V + V L G A L E+ PGRM V T A S+QLLV E FHPGW A + G AT +RVN DF+GC+V G H + F+P +R G V+S + ++ Sbjct: 554 GVEWVSRGYAEEAGLELARNGSPWLRIPNPLARIRMVSEAQPRPDPPDSAPPPDPRTSAWV--EEEVVLGGGAVGQAELREESPGRMLVGTNAQSRQLLVVAESFHPGWTAEVDGRATAVLRVNRDFIGCVVEAGEHEIRLVFDPPSRRLGLVLSALGMV 711
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A7V2Y010_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y010_9BACT) HSP 1 Score: 118 bits (295), Expect = 1.000e-27 Identity = 54/146 (36.99%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 67 DWHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEP----AGQRYGAVISIIALLVTFG 492 +W +VPDP+ RVRC+ K IA + PA + E+ + +T +V + + L D PPG +RPGR+ + PS+Q++ ++R+HPGW A++ GH R+NGDF+GC+V G H + F+P G+R +AL+ G Sbjct: 582 EWLEVPDPVSRVRCVAKAIAGNDPARDIGEIDLLSTVLVD--EPIELSDSPPGHVTAFTERPGRLAISVDVPSRQMVAISDRYHPGWWATVDGHPVPVHRINGDFMGCVVEAGRHTLCLEFDPDDLKTGKRLTLAGKALALIYFLG 725
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: UPI0019A35407 (Uncharacterized protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI0019A35407) HSP 1 Score: 108 bits (270), Expect = 1.900e-26 Identity = 57/171 (33.33%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 1 GVEWVHRRAAEKVTAEFSSVRGDWHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALED--RP--PGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAI-RVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLVTFGGC 498 GV WVH + ++ S + +W +VP+P+PRVR +T+ + + + A L + T ++ + + L++ P PG A + ++PG++E+ T AP++QLLV +E +HPGW G A++ + R GD+ C+V G+H V FRF P G +++ LL+ G C Sbjct: 18 GVRWVHSSQWKAPASQAQSPQEEWLEVPNPLPRVRLVTQSVVSASVARDLRGIDPARTVLLEAPVGLELKNVGNPVIPGQARIVSEQPGQIEIATNAPTRQLLVLSESWHPGWTTKQDGDASREVLRAYGDYQACLVEPGSHTVLFRFAPKSFEVGKRVTLFGLLLAAGMC 188
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: L0DJC8_SINAD (Bacterial membrane protein YfhO n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) TaxID=886293 RepID=L0DJC8_SINAD) HSP 1 Score: 111 bits (278), Expect = 1.970e-25 Identity = 54/138 (39.13%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 70 WHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLV 483 W + P+PR R +T+ D P + + + TA+V L PG A L DRPG+++V T S+QLLV +E H GW + G +RV GDF+GC+VP G HHV FRF P+ QR G +S++ L++ Sbjct: 581 WIPLFGPLPRARLVTQTQRTDNPDRDIETIDVAMTALVSRDLPQPLPPGTPGVADLVGDRPGKIDVMTTTESKQLLVLSESIHRGWRVKVDGKTQPVLRVYGDFMGCLVPQGRHHVQFRFLPSSQRAGLWLSVLGLVL 718
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A1Q7GZ87_9BACT (Uncharacterized protein n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7GZ87_9BACT) HSP 1 Score: 106 bits (265), Expect = 1.070e-23 Identity = 58/146 (39.73%), Postives = 79/146 (54.11%), Query Frame = 1 Query: 70 WHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRP-------PGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLVT 486 W +V D MPR R ++ V ++D AE + + I +AL DR PG A + DRPGR+ ++ AP QLLV TERFH GW A A+RV+GD++GC++ GTH V F F PA R G ++I L +T Sbjct: 529 WVRVEDTMPRARLISNVQSSDRIAEDIRHIDIA---------HMALTDRAVDGLSGEPGQARVVTDRPGRIVIQATAPGTQLLVLTERFHEGWRARDGEREYPALRVDGDYVGCVIDAGTHRVTFTFAPASARNGLWLTIAGLALT 665
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: UPI0019867926 (Uncharacterized protein n=1 Tax=Fuerstiella sp. TaxID=1936112 RepID=UPI0019867926) HSP 1 Score: 106 bits (265), Expect = 1.110e-23 Identity = 61/174 (35.06%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 1 GVEWV-----HRRAAEKVTAEFSSVRGDWHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVA-LEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLVT--FGGC 498 GV W+ H R A + S W VP+P+PR R P ++ +L E +V + D PG A + DRPGR+E++T+A S +LLV +ERF GWNA++ G +R DF+GC+ P G H + F F+PA G +IS + LL+ F C Sbjct: 570 GVRWINSGGNHSRIAGLQPTDDSR----WLAVPNPLPRARFTVNTATIADPLAAVRKLQPEGFTVVDRDLEIPQTNDTAPGAATIVVDRPGRIEIQTSADSPRLLVLSERFSDGWNATVDGATVPIVRAEIDFMGCVAPVGDHMIRFTFDPASVHSGRLISTMTLLLLCLFAAC 739
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A1N6DT31_9BACT (Membrane protein YfhO n=1 Tax=Singulisphaera sp. GP187 TaxID=1882752 RepID=A0A1N6DT31_9BACT) HSP 1 Score: 105 bits (263), Expect = 2.050e-23 Identity = 53/138 (38.41%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 70 WHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLV 483 W + P+PR R +T+ +D P + + + TA+VG + L PG A L DRPG+++V T S+QLLV +E H GW + G +RV GDF+GC+VP G HHV FRF+ + R G +S + L++ Sbjct: 582 WIPLFGPLPRARLVTQTQRSDDPNRDIETIDVAITALVGRD--LPLPPATPGAADLVGDRPGKIDVMTTTESKQLLVLSETNHRGWRVKVDGKTQPILRVYGDFMGCVVPQGRHHVQFRFQSSSVRAGFWLSTLGLVL 717
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A847YB98_9BACT (YfhO family protein n=1 Tax=Thermogutta sp. TaxID=1962930 RepID=A0A847YB98_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 3.830e-20 Identity = 50/141 (35.46%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 70 WHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLVTFG 492 W + PD +PR R + +V+ A + L + A+V V + + +DRPGRM V A LLV +E +H GW A++ G ++ +RVNGDF+GC+VP G H V F P +G IS AL ++ G Sbjct: 354 WEKSPDRLPRFRTVGRVVVASPTPAVIERLDPQRAALV--EKAVGVSPEAAARLGVLDDRPGRMAVAVQASGPLLLVVSEAYHSGWGAAVDGRESEVLRVNGDFMGCVVPPGRHRVILAFRPWSLIWGRGISFAALTLSAG 492
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A3E0N804_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0N804_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 4.070e-19 Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 25 AAEKVTA-EFSSVRGDWHQVPDPMPRVRCMTKVIAADTPAESLSELAIETTAMVGSHDRVALEDRPPGTAILTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIAL 477 + E+V+A + V G + +P P PR + +++ ++ PA + + + A+V + + LE PPG + D+PGR+ + T+ + +LLVT E FH GW + G + +RVNGDFLG +VP GT V F P +G +S L Sbjct: 608 SVEEVSAPREADVAGPFVALPVPAPRFQLVSRAFQSERPAWDIRRIDVTRAALVATP--LELEGGPPGMVHVVADKPGRLWLVTSCVAPRLLVTNESFHAGWRVRVDGVDYEPLRVNGDFLGAVVPGGTRRVELEFAPVSLTHGLRMSACGL 757
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Match: A0A7Y5U5B8_9BACT (YfhO family protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y5U5B8_9BACT) HSP 1 Score: 76.6 bits (187), Expect = 3.530e-15 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 235 LTEDRPGRMEVETAAPSQQLLVTTERFHPGWNASIAGHATKAIRVNGDFLGCIVPTGTHHVAFRFEPAGQRYGAVISIIALLV 483 L DRPG++ AP ++L TERF GW+A+I + +RV DFLGCIV G H V RF P YG+++S I +++ Sbjct: 14 LVVDRPGQLIARVDAPGTRVLAFTERFDDGWSATIDDVPARTVRVEEDFLGCIVTAGVHRVDLRFMPRSFVYGSIVSAIGVVL 96 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107792.1656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107792.1656.1 >prot_M-pyrifera_M_contig107792.1656.1 ID=prot_M-pyrifera_M_contig107792.1656.1|Name=mRNA_M-pyrifera_M_contig107792.1656.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp GVEWVHRRAAEKVTAEFSSVRGDWHQVPDPMPRVRCMTKVIAADTPAESLback to top mRNA from alignment at M-pyrifera_M_contig107792:3..500+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107792.1656.1 ID=mRNA_M-pyrifera_M_contig107792.1656.1|Name=mRNA_M-pyrifera_M_contig107792.1656.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig107792:3..500+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107792:3..500+ >mRNA_M-pyrifera_M_contig107792.1656.1 ID=mRNA_M-pyrifera_M_contig107792.1656.1|Name=mRNA_M-pyrifera_M_contig107792.1656.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig107792:3..500+ (Macrocystis pyrifera P11B4 male)back to top |