mRNA_M-pyrifera_M_contig107757.1647.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107757.1647.1
Unique NamemRNA_M-pyrifera_M_contig107757.1647.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: E9BLK9_LEIDB (DREV methyltransferase, putative n=9 Tax=Leishmania TaxID=5658 RepID=E9BLK9_LEIDB)

HSP 1 Score: 73.6 bits (179), Expect = 1.120e-13
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE G  Q+RPSE +P     C    SFE++    + N+L  + FEV+ WTR+PY+  G++  EY  LN+AVF+ R
Sbjct:  223 FVEDGPRQKRPSEILPMQGGECCRGASFEQSMSKLVENVLVPMGFEVVRWTRLPYLCEGNLRIEYAVLNDAVFILR 298          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A504X686_LEIDO (DREV methyltransferase family protein n=1 Tax=Leishmania donovani TaxID=5661 RepID=A0A504X686_LEIDO)

HSP 1 Score: 73.6 bits (179), Expect = 2.070e-13
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE G  Q+RPSE +P     C    SFE++    + N+L  + FEV+ WTR+PY+  G++  EY  LN+AVF+ R
Sbjct:  225 FVEDGPRQKRPSEILPMQGGECCRGASFEQSMSKLVENVLVPMGFEVVRWTRLPYLCEGNLRIEYAVLNDAVFILR 300          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A836L672_9TRYP (Uncharacterized protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836L672_9TRYP)

HSP 1 Score: 72.4 bits (176), Expect = 3.000e-13
Identity = 32/76 (42.11%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE G  QR+PSE +P     C    SFE++    + N+L  + FE++ WTR+PY+  G++  EY  LN+AVF+ R
Sbjct:  223 FVEDGPRQRKPSEILPMEGGECCRGASFEQSLSKLVENVLVPMGFELIRWTRLPYLCEGNLRIEYALLNDAVFILR 298          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A7S1M891_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1M891_NEODS)

HSP 1 Score: 71.2 bits (173), Expect = 1.140e-12
Identity = 31/77 (40.26%), Postives = 45/77 (58.44%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCRP 231
            FVE G+ Q+RPSE +P     C     FE+  +  + N++    F+VL WTRVPY+  G  + +YY L++ V V RP
Sbjct:  269 FVEDGNKQKRPSEELPMQGGRCGERVPFEQCVQTLVDNVVKPAGFQVLRWTRVPYLCEGSASYQYYALDDVVLVMRP 345          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A836GCE1_9TRYP (Uncharacterized protein n=1 Tax=Leishmania martiniquensis TaxID=1580590 RepID=A0A836GCE1_9TRYP)

HSP 1 Score: 69.7 bits (169), Expect = 2.930e-12
Identity = 30/76 (39.47%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE+G+ Q+RPSE +P     C    SFE++    + N+L  + FE++ WTR+PY+  G +  EY  L++AV + R
Sbjct:  223 FVENGTRQKRPSEALPMEGGECCRGASFEQSLRKLVENVLLPMGFELVRWTRLPYLCEGSLRNEYAVLSDAVLILR 298          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A0M9G5V9_9TRYP (Putative mitochondrial DREV methyltransferase n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G5V9_9TRYP)

HSP 1 Score: 68.9 bits (167), Expect = 5.500e-12
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFV 222
            FVE G  Q+ PSE++P     C    S+E +A     N+L  + FE++ WTR+PY+  G++  EY  LN+AVFV
Sbjct:  223 FVEDGPRQKAPSEKLPMKGGECCKGASYEASASKLFENVLIPMGFELVRWTRLPYLCEGNLRNEYALLNDAVFV 296          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: W6KL63_9TRYP (Uncharacterized protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KL63_9TRYP)

HSP 1 Score: 68.9 bits (167), Expect = 5.900e-12
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE  + QR P ER+  + + C    SFE +    + N+L    FEVL WTRVPY+  G+   EY  LN+AVFV +
Sbjct:  227 FVEYNNEQRAPKERLCMDGVECGKGASFEASVSKLVENVLQPCGFEVLRWTRVPYLCEGNFELEYAVLNDAVFVLK 302          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A1E1J1P1_LEIGU (DREV methyltransferase, putative n=4 Tax=Viannia TaxID=37616 RepID=A0A1E1J1P1_LEIGU)

HSP 1 Score: 68.2 bits (165), Expect = 1.070e-11
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE+G  Q+RP+E +P     C    SFE +    + N+L  + FE++ WTR+PY+  G++  EY  LN+AV + R
Sbjct:  223 FVENGPRQQRPNEVLPMEGGECCRGASFEASMSKLVENVLVPMGFELIRWTRLPYLCEGNLRLEYAVLNDAVLILR 298          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A836KDW8_9TRYP (Uncharacterized protein n=4 Tax=Mundinia TaxID=2249475 RepID=A0A836KDW8_9TRYP)

HSP 1 Score: 68.2 bits (165), Expect = 1.070e-11
Identity = 29/76 (38.16%), Postives = 47/76 (61.84%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCR 228
            FVE+G+ Q+RP E +P     C    SFEE+    + N+L  + F+++ WTR+PY+  G++  EY  L++AV + R
Sbjct:  223 FVENGTRQKRPCEFLPMEGGECCRGASFEESLSKLVENVLTPMGFDLIRWTRLPYLCEGNLRNEYAVLSDAVLILR 298          
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Match: A0A8K1CSU6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CSU6_PYTOL)

HSP 1 Score: 67.8 bits (164), Expect = 1.420e-11
Identity = 31/81 (38.27%), Postives = 49/81 (60.49%), Query Frame = 1
Query:    1 FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSWTRVPYISAGDMNTEYYTLNNAVFVCRPVARD 243
            FVE G+ +  PSE +P +  LC    SFE++A   + N+L    F+++ ++RVPY+  GD+   YY L++A+FV R    D
Sbjct:  212 FVEVGTRRVDPSEMLPMSGGLCTQGASFEDSASVLLRNVLQPAGFQLVQFSRVPYLCRGDLQQPYYVLSDAIFVLRVANSD 292          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107757.1647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E9BLK9_LEIDB1.120e-1343.42DREV methyltransferase, putative n=9 Tax=Leishmani... [more]
A0A504X686_LEIDO2.070e-1343.42DREV methyltransferase family protein n=1 Tax=Leis... [more]
A0A836L672_9TRYP3.000e-1342.11Uncharacterized protein n=1 Tax=Porcisia hertigi T... [more]
A0A7S1M891_NEODS1.140e-1240.26Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
A0A836GCE1_9TRYP2.930e-1239.47Uncharacterized protein n=1 Tax=Leishmania martini... [more]
A0A0M9G5V9_9TRYP5.500e-1241.89Putative mitochondrial DREV methyltransferase n=1 ... [more]
W6KL63_9TRYP5.900e-1243.42Uncharacterized protein n=1 Tax=Phytomonas sp. iso... [more]
A0A1E1J1P1_LEIGU1.070e-1139.47DREV methyltransferase, putative n=4 Tax=Viannia T... [more]
A0A836KDW8_9TRYP1.070e-1138.16Uncharacterized protein n=4 Tax=Mundinia TaxID=224... [more]
A0A8K1CSU6_PYTOL1.420e-1138.27Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107757contigM-pyrifera_M_contig107757:230..616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score73.6
Seed ortholog evalue5e-11
Seed eggNOG ortholog5664.LmjF.30.1100
Preferred nameMETTL9
KEGG koko:K18328
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DREV methyltransferase
EggNOG OGs3XU1T@5653,KOG3987@1,KOG3987@2759
COG Functional cat.H
Best tax levelKinetoplastida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons2
Model size246
Cds size246
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.951633-CDS-M-pyrifera_M_contig107757:229..4271622815586.951633-CDS-M-pyrifera_M_contig107757:229..427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107757 230..427 -
1692277476.0394862-CDS-M-pyrifera_M_contig107757:229..4271692277476.0394862-CDS-M-pyrifera_M_contig107757:229..427Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107757 230..427 -
1622815586.9642775-CDS-M-pyrifera_M_contig107757:568..6161622815586.9642775-CDS-M-pyrifera_M_contig107757:568..616Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107757 569..616 -
1692277476.0521076-CDS-M-pyrifera_M_contig107757:568..6161692277476.0521076-CDS-M-pyrifera_M_contig107757:568..616Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107757 569..616 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107757.1647.1prot_M-pyrifera_M_contig107757.1647.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107757 230..616 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107757.1647.1

>prot_M-pyrifera_M_contig107757.1647.1 ID=prot_M-pyrifera_M_contig107757.1647.1|Name=mRNA_M-pyrifera_M_contig107757.1647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
FVESGSGQRRPSERVPKNKLLCACCCSFEEAAEWFIHNLLAKVDFEVLSW
TRVPYISAGDMNTEYYTLNNAVFVCRPVARD*
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mRNA from alignment at M-pyrifera_M_contig107757:230..616-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107757.1647.1 ID=mRNA_M-pyrifera_M_contig107757.1647.1|Name=mRNA_M-pyrifera_M_contig107757.1647.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig107757:230..616- (Macrocystis pyrifera P11B4 male)
TTCGTTGAGTCTGGCTCCGGACAGAGGCGGCCCAGCGAGAGGGTGCCTGT GCGAGCCCCTGGGGTCATCTGGGCCAAGCAGGAGGAGGACCGGGCAGCGG CTGCGCCTGCCGCTGCTCAGGAGCCAAGCTCGCTTTGGGCGAGGAAGACC GCCGGCACCGACTACTCCGGCCCGAGGGTGATCACACAGAAGAACAAACT CCTTTGCGCTTGTTGCTGCTCCTTTGAGGAGGCGGCCGAGTGGTTCATTC ACAACCTCTTGGCGAAGGTAGATTTCGAGGTTCTGAGCTGGACTCGAGTT CCTTACATCTCAGCAGGTGATATGAACACAGAGTACTACACCTTGAACAA TGCTGTGTTCGTCTGCCGCCCAGTGGCGCGCGACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107757:230..616-

>mRNA_M-pyrifera_M_contig107757.1647.1 ID=mRNA_M-pyrifera_M_contig107757.1647.1|Name=mRNA_M-pyrifera_M_contig107757.1647.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig107757:230..616- (Macrocystis pyrifera P11B4 male)
TTCGTTGAGTCTGGCTCCGGACAGAGGCGGCCCAGCGAGAGGGTGCCTTT
CGTTGAGTCTGGCTCCGGACAGAGGCGGCCCAGCGAGAGGGTGCCTAAGA
ACAAACTCCTTTGCGCTTGTTGCTGCTCCTTTGAGGAGGCGGCCGAGTGG
TTCATTCACAACCTCTTGGCGAAGGTAGATTTCGAGGTTCTGAGCTGGAC
TCGAGTTCCTTACATCTCAGCAGGTGATATGAACACAGAGTACTACACCT
TGAACAATGCTGTGTTCGTCTGCCGCCCAGTGGCGCGCGACTGAAAGAAC
AAACTCCTTTGCGCTTGTTGCTGCTCCTTTGAGGAGGCGGCCGAGTGGTT
CATTCACAACCTCTTGGCGAAGGTAGATTTCGAGGTTCTGAGCTGGACTC
GAGTTCCTTACATCTCAGCAGGTGATATGAACACAGAGTACTACACCTTG
AACAATGCTGTGTTCGTCTGCCGCCCAGTGGCGCGCGACTGA
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