mRNA_M-pyrifera_M_contig107752.1646.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107752.1646.1
Unique NamemRNA_M-pyrifera_M_contig107752.1646.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: L8GF58_ACACA (Pyridine nucleotidedisulfide oxidoreductase family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GF58_ACACA)

HSP 1 Score: 97.1 bits (240), Expect = 8.270e-21
Identity = 60/149 (40.27%), Postives = 87/149 (58.39%), Query Frame = 1
Query:    1 FSQLPNVVLWPGERIVGIDGNSGEVVSRTGRRFSNVSSVFLC-VGFKPNTGFA-SNMPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKE--ALTAYATEERRVCIMLGPSNAVVVGPDGV 435
            F   PNV ++  +++V  D +   +V+  G R    + V  C VGF PNT F  +N   LL   G ++VNEHLQ+  YP++FA+GD+A +NE KL QNA +HA V A+NI  ++S     A+ +Y    R + I LGP  A++V  D V
Sbjct:  296 FKAFPNVRIYADQKVVDTDQDC--LVTDKGDRIP--TDVAYCGVGFVPNTDFMKANFAELLTPKGHIKVNEHLQTVDYPNIFALGDIADINEEKLAQNAEKHADVVAKNIRAMESTCPFAAMYSYTPGTRVLIISLGPKRAMLVRGDRV 440          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A371D8G8_9APHY (FAD/NAD(P)-binding domain-containing protein n=2 Tax=Polyporus TaxID=5637 RepID=A0A371D8G8_9APHY)

HSP 1 Score: 64.7 bits (156), Expect = 2.010e-9
Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 1
Query:    7 QLPNVVLWPGERIVG-IDGNSGEVVSRTGRRFSNVSSVFLCVGFKPNTGFASNM-PSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYATEERRVCIMLGPS 405
            ++ N+ +  G+ I   ++G +G V ++ G+   +   V    G KPNT F  ++   +++E+GFV+VNE L+   +P +FA+GD+    E K    A  H  V A N++     K     Y      + I LG S
Sbjct:  204 RIRNIDVILGDAIENPVEGVTG-VTTKNGKSIPDADLVIQAFGSKPNTEFVKSLGDGVVNEHGFVKVNEFLEVPGHPGVFAVGDIIDWKEQKQAAKANTHIKVVAANVLSFLQGKPLKQKYKGSAEMILIPLGKS 337          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A151ZIZ8_9MYCE (Pyr_redox_2 domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZIZ8_9MYCE)

HSP 1 Score: 64.7 bits (156), Expect = 2.110e-9
Identity = 41/109 (37.61%), Postives = 62/109 (56.88%), Query Frame = 1
Query:  115 VFLCVGFK-PNTGFASNMPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYATEERRVCIMLGPSNAVVVGP-DGV 435
            VF  VG K  NT   ++    L+E G V+VN  LQ   Y ++FA+GD+ +++E K   +A  H T+AA NI+ LDS+K+ + A  +  +     + PS  V  GP DG+
Sbjct:  263 VFWTVGNKLNNTPLQNHFYKALNENGRVKVNRQLQVEGYQNIFAVGDINNIDEMKNAYHAHYHGTIAANNIISLDSSKDKINAKLSSHKS----MKPSLVVSFGPSDGI 367          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: L8GDL0_ACACA (Pyridine nucleotidedisulfide oxidoreductase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GDL0_ACACA)

HSP 1 Score: 62.8 bits (151), Expect = 1.010e-8
Identity = 34/91 (37.36%), Postives = 54/91 (59.34%), Query Frame = 1
Query:   16 NVVLWPGERIVGIDGNSGEVVSRTGRRFSNVSSVFLCVGFKPNTGFA-SNMPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQ 285
            N  +   +++V  +G+S  +++  G R       + CVGF PNT F  +    LL E G ++VNE+LQ   +P++FA+GDVA ++E KL Q
Sbjct:  337 NARILKDQKVVSAEGDS--LLTTKGERI-RTDVAYFCVGFVPNTDFLQAECGDLLSERGHIKVNEYLQVKGHPNIFAVGDVADIDEEKLAQ 424          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A835XJN8_9CHLO (Pyr_redox_2 domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XJN8_9CHLO)

HSP 1 Score: 61.6 bits (148), Expect = 2.410e-8
Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  115 VFLCVGFKPNTGFASN--MPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKL 333
            V  C G  PN+GF  +  +  +L+E G V+V   LQ   +PHMFA+GD+ SV+ENK+   A +HA +AA++I  +
Sbjct:  230 VLWCTGSAPNSGFLRDGELAGVLNERGQVKVEPTLQVVGHPHMFALGDITSVDENKMGFLATKHAELAAKSIQAM 304          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A5C3QDB6_9AGAR (FAD/NAD(P)-binding domain-containing protein n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3QDB6_9AGAR)

HSP 1 Score: 61.2 bits (147), Expect = 3.320e-8
Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 1
Query:   34 GERIVGIDGNSG-EVVSRTGRRFSNVSSVFLCVGFKPNTGFASNMPSL----LDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYATEERRVCIMLGPSNAVVVGP 426
            GE +  I   +G EV +R+G+       VF+  G +PNT F     SL    L   GFV+V   LQ   + ++FA GD+    E K V  A +HATV A NI+KL    + L  Y   +  +C  +G +  V   P
Sbjct:  214 GEYVDDIPARTGPEVKTRSGKTVP-ADLVFVHTGPRPNTEFIKTSDSLGPDALTTSGFVKVKPTLQLAEHTNIFAAGDIIDWKEQKQVFKAAKHATVIANNILKLLGG-QPLKPYQGADEILCCTVGRNGGVAHMP 347          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A0D7AZI9_9AGAR (FAD/NAD(P)-binding domain-containing protein n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7AZI9_9AGAR)

HSP 1 Score: 60.5 bits (145), Expect = 5.350e-8
Identity = 28/95 (29.47%), Postives = 47/95 (49.47%), Query Frame = 1
Query:  130 GFKPNTGFASNMPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYATEERRVCIMLGPSNAV 414
            G +PNT    ++P+     G V V + LQ  +Y H+FA+GD+  + E K V NA  HA V A N++   + +     Y      + + +G  + +
Sbjct:  187 GIRPNTELLKSLPNATGPSGLVSVRKSLQLASYSHIFALGDIVDIPEQKTVLNAMNHANVVAPNVLSYLAGQPLRYQYEGSMTALLVTIGKQSGI 281          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A5C2S046_9APHY (FAD/NAD(P)-binding domain-containing protein n=2 Tax=Lentinus tigrinus TaxID=5365 RepID=A0A5C2S046_9APHY)

HSP 1 Score: 60.1 bits (144), Expect = 8.660e-8
Identity = 37/134 (27.61%), Postives = 62/134 (46.27%), Query Frame = 1
Query:    7 QLPNVVLWPGERIVGIDGNSGEVVSRTGRRFSNVSSVFLCVGFKPNTGFASNM-PSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYATEERRVCIMLGPS 405
            ++ NV L   + I         V +++G+   +   V    G KPNT F  ++   +++E+GFV+VNE L+   +P +FA+GD+    E K    A  H  V + N++     +     Y      + I LG S
Sbjct:  237 RIRNVDLILDDEIENPTEGVAGVTTKSGKSLPDADLVIQAFGAKPNTAFIKSLGEDVVNEHGFVKVNEFLEVPGHPGVFAVGDIIDWKEQKQGAKANTHVKVVSANVVSFLHGQPLKKEYKGSPEMILIPLGKS 370          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A5C5G2B3_9BASI (Pyr_redox_2 domain-containing protein n=1 Tax=Rhodotorula diobovata TaxID=5288 RepID=A0A5C5G2B3_9BASI)

HSP 1 Score: 58.5 bits (140), Expect = 2.940e-7
Identity = 32/72 (44.44%), Postives = 41/72 (56.94%), Query Frame = 1
Query:  115 VFLCVGFKPNTGFASNM-PSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIM 327
            VF+  G  PNTGF     P  L+E   V+V    Q   + H+FAIGD+ SV E KLV +A  H  VAA N++
Sbjct:  255 VFVAFGSTPNTGFVGEFDPQALNEKKQVKVRPSFQVEGHDHLFAIGDITSVPETKLVAHAKNHGAVAAANVL 326          
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Match: A0A4T0FT15_9BASI (Pyr_redox_2 domain-containing protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FT15_9BASI)

HSP 1 Score: 58.2 bits (139), Expect = 3.910e-7
Identity = 38/107 (35.51%), Postives = 58/107 (54.21%), Query Frame = 1
Query:   58 GNSGEVVSRTGRRFSNVSSVFLCVGFKPNTGFASNMP-SLLDEYGFVRVNEHLQ--SCAYPHMFAIGDVASVNENKLVQNAFRHATVAAENIMKLDSNKEALTAYAT 369
            G    V +  G+ F     VF  +G KPN     +   SL+ + G V+V+++LQ  S     +FA+GD+A+++E K   NA RHA+  A NI  L + K+A   Y+T
Sbjct:  218 GEERTVRTTAGKEFK-ADFVFNAMGTKPNISLIQDFDDSLISDKGLVKVDDYLQVDSPKLDRVFAMGDIANIDELKTFVNAQRHASYIATNITNLANGKKASKKYST 323          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107752.1646.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8GF58_ACACA8.270e-2140.27Pyridine nucleotidedisulfide oxidoreductase family... [more]
A0A371D8G8_9APHY2.010e-929.63FAD/NAD(P)-binding domain-containing protein n=2 T... [more]
A0A151ZIZ8_9MYCE2.110e-937.61Pyr_redox_2 domain-containing protein n=1 Tax=Tieg... [more]
L8GDL0_ACACA1.010e-837.36Pyridine nucleotidedisulfide oxidoreductase domain... [more]
A0A835XJN8_9CHLO2.410e-842.67Pyr_redox_2 domain-containing protein n=1 Tax=Edap... [more]
A0A5C3QDB6_9AGAR3.320e-834.56FAD/NAD(P)-binding domain-containing protein n=1 T... [more]
A0A0D7AZI9_9AGAR5.350e-829.47FAD/NAD(P)-binding domain-containing protein n=1 T... [more]
A0A5C2S046_9APHY8.660e-827.61FAD/NAD(P)-binding domain-containing protein n=2 T... [more]
A0A5C5G2B3_9BASI2.940e-744.44Pyr_redox_2 domain-containing protein n=1 Tax=Rhod... [more]
A0A4T0FT15_9BASI3.910e-735.51Pyr_redox_2 domain-containing protein n=1 Tax=Wall... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107752contigM-pyrifera_M_contig107752:3..437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score70.9
Seed ortholog evalue5.7e-10
Seed eggNOG ortholog69293.ENSGACP00000018395
Preferred nameAIFM2
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004174,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005811,GO:0005829,GO:0006091,GO:0006915,GO:0006996,GO:0007005,GO:0008150,GO:0008152,GO:0008219,GO:0008637,GO:0009055,GO:0009987,GO:0010941,GO:0010942,GO:0012501,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016645,GO:0016649,GO:0019867,GO:0022900,GO:0022904,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0036094,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0048037,GO:0048518,GO:0048522,GO:0050660,GO:0050662,GO:0050789,GO:0050794,GO:0055114,GO:0065007,GO:0071840,GO:0097159,GO:0098588,GO:0098805,GO:1901265,GO:1901363
EggNOG free text desc.apoptosis-inducing factor
EggNOG OGs38M1G@33154,3BDVQ@33208,3CYIM@33213,489IE@7711,493NR@7742,49S91@7898,COG0446@1,KOG1336@2759
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Exons1
Model size435
Cds size435
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.9152694-CDS-M-pyrifera_M_contig107752:2..4371622815586.9152694-CDS-M-pyrifera_M_contig107752:2..437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107752 3..437 +
1692277476.0260644-CDS-M-pyrifera_M_contig107752:2..4371692277476.0260644-CDS-M-pyrifera_M_contig107752:2..437Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107752 3..437 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107752.1646.1prot_M-pyrifera_M_contig107752.1646.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107752 3..437 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107752.1646.1

>prot_M-pyrifera_M_contig107752.1646.1 ID=prot_M-pyrifera_M_contig107752.1646.1|Name=mRNA_M-pyrifera_M_contig107752.1646.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp
FSQLPNVVLWPGERIVGIDGNSGEVVSRTGRRFSNVSSVFLCVGFKPNTG
FASNMPSLLDEYGFVRVNEHLQSCAYPHMFAIGDVASVNENKLVQNAFRH
ATVAAENIMKLDSNKEALTAYATEERRVCIMLGPSNAVVVGPDGV
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mRNA from alignment at M-pyrifera_M_contig107752:3..437+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107752.1646.1 ID=mRNA_M-pyrifera_M_contig107752.1646.1|Name=mRNA_M-pyrifera_M_contig107752.1646.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=435bp|location=Sequence derived from alignment at M-pyrifera_M_contig107752:3..437+ (Macrocystis pyrifera P11B4 male)
TTTTCCCAGCTGCCAAACGTCGTGCTCTGGCCTGGAGAGAGGATCGTGGG CATCGACGGCAACAGTGGCGAGGTGGTATCGAGGACAGGCAGGCGGTTCT CCAACGTCTCTTCTGTGTTTCTCTGCGTCGGATTCAAGCCCAACACTGGG TTTGCCAGCAACATGCCTTCCCTCCTCGACGAGTACGGCTTCGTGCGCGT CAATGAGCACCTCCAGAGCTGTGCGTACCCCCACATGTTCGCGATCGGAG ACGTGGCAAGCGTCAACGAAAACAAGCTGGTTCAGAACGCCTTCAGGCAT GCCACCGTCGCAGCTGAGAACATCATGAAGCTTGACAGCAACAAGGAGGC CCTCACCGCTTACGCGACTGAGGAGCGACGAGTGTGTATCATGCTTGGTC CCTCTAACGCTGTCGTAGTGGGCCCTGATGGTGTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107752:3..437+

>mRNA_M-pyrifera_M_contig107752.1646.1 ID=mRNA_M-pyrifera_M_contig107752.1646.1|Name=mRNA_M-pyrifera_M_contig107752.1646.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig107752:3..437+ (Macrocystis pyrifera P11B4 male)
TTTTCCCAGCTGCCAAACGTCGTGCTCTGGCCTGGAGAGAGGATCGTGGG
CATCGACGGCAACAGTGGCGAGGTGGTATCGAGGACAGGCAGGCGGTTCT
CCAACGTCTCTTCTGTGTTTCTCTGCGTCGGATTCAAGCCCAACACTGGG
TTTGCCAGCAACATGCCTTCCCTCCTCGACGAGTACGGCTTCGTGCGCGT
CAATGAGCACCTCCAGAGCTGTGCGTACCCCCACATGTTCGCGATCGGAG
ACGTGGCAAGCGTCAACGAAAACAAGCTGGTTCAGAACGCCTTCAGGCAT
GCCACCGTCGCAGCTGAGAACATCATGAAGCTTGACAGCAACAAGGAGGC
CCTCACCGCTTACGCGACTGAGGAGCGACGAGTGTGTATCATGCTTGGTC
CCTCTAACGCTGTCGTAGTGGGCCCTGATGGTGTATTTTCCCAGCTGCCA
AACGTCGTGCTCTGGCCTGGAGAGAGGATCGTGGGCATCGACGGCAACAG
TGGCGAGGTGGTATCGAGGACAGGCAGGCGGTTCTCCAACGTCTCTTCTG
TGTTTCTCTGCGTCGGATTCAAGCCCAACACTGGGTTTGCCAGCAACATG
CCTTCCCTCCTCGACGAGTACGGCTTCGTGCGCGTCAATGAGCACCTCCA
GAGCTGTGCGTACCCCCACATGTTCGCGATCGGAGACGTGGCAAGCGTCA
ACGAAAACAAGCTGGTTCAGAACGCCTTCAGGCATGCCACCGTCGCAGCT
GAGAACATCATGAAGCTTGACAGCAACAAGGAGGCCCTCACCGCTTACGC
GACTGAGGAGCGACGAGTGTGTATCATGCTTGGTCCCTCTAACGCTGTCG
TAGTGGGCCCTGATGGTGTA
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