mRNA_M-pyrifera_M_contig107743.1643.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107743.1643.1
Unique NamemRNA_M-pyrifera_M_contig107743.1643.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: L1JD67_GUITC (Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JD67_GUITC)

HSP 1 Score: 98.2 bits (243), Expect = 3.670e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:   10 RAALGLHAPALTLLLILL---NAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRS 270
            R A  L A   +L +++L   NAGLF+ DHVHFQYNGMLLG+L+L I+ + +G+    +FLF+VLVN KHL+L++ PA FVYLLR HC S
Sbjct:  140 RNAFALDANQASLSIVILAAVNAGLFITDHVHFQYNGMLLGLLLLSISCISNGQDLLGSFLFAVLVNMKHLYLSLAPAYFVYLLRHHCIS 229
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A7S4KYE2_GUITH (Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KYE2_GUITH)

HSP 1 Score: 98.2 bits (243), Expect = 4.810e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:   10 RAALGLHAPALTLLLILL---NAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRS 270
            R A  L A   +L +++L   NAGLF+ DHVHFQYNGMLLG+L+L I+ + +G+    +FLF+VLVN KHL+L++ PA FVYLLR HC S
Sbjct:   25 RNAFALDANQASLSIVILAAVNAGLFITDHVHFQYNGMLLGLLLLSISCISNGQDLLGSFLFAVLVNMKHLYLSLAPAYFVYLLRHHCIS 114
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A7S4KY25_GUITH (Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KY25_GUITH)

HSP 1 Score: 98.2 bits (243), Expect = 8.630e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 1 
Query:   10 RAALGLHAPALTLLLILL---NAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRS 270
            R A  L A   +L +++L   NAGLF+ DHVHFQYNGMLLG+L+L I+ + +G+    +FLF+VLVN KHL+L++ PA FVYLLR HC S
Sbjct:  181 RNAFALDANQASLSIVILAAVNAGLFITDHVHFQYNGMLLGLLLLSISCISNGQDLLGSFLFAVLVNMKHLYLSLAPAYFVYLLRHHCIS 270
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A835T181_9CHLO (Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T181_9CHLO)

HSP 1 Score: 94.4 bits (233), Expect = 2.030e-20
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 1 
Query:   52 LILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRSGTIE 282
            L+ LNAGL +VDH+HFQYNG++LGVL+L +AA  +G+   + FLF+VL+N KHLFL   PA FVYLLR +C   T +
Sbjct:  185 LLALNAGLLLVDHIHFQYNGIMLGVLLLSLAAARTGRHLLSGFLFAVLLNMKHLFLHAAPAYFVYLLRHYCFETTAD 261
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A7R9BQV8_9CRUS (Alpha-1,3-glucosyltransferase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BQV8_9CRUS)

HSP 1 Score: 94.0 bits (232), Expect = 2.760e-20
Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 1 
Query:   40 LTLLLILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRSGTIE 282
            +T  L+  +  LF+VDH+HFQYNG L GVL L I  L SGKP+W AFLF+VL+N KH++L + PA F YLLR  C +  ++
Sbjct:  156 MTTALLFADVNLFIVDHLHFQYNGFLNGVLFLSIYCLMSGKPFWGAFLFAVLLNLKHIYLYIAPAFFCYLLRTECFASPVK 236
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A3Q0IZI3_DIACI (Alpha-1,3-glucosyltransferase n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A3Q0IZI3_DIACI)

HSP 1 Score: 90.1 bits (222), Expect = 3.100e-20
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 1 
Query:   49 LLILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRH 261
            +LI+ NAGLF VDH+HFQYNG L GVL+L IA +  G  Y  AF F+VL+N KH+F+ + PA FV+LLR H
Sbjct:  140 ILIIFNAGLFFVDHIHFQYNGFLFGVLLLSIARILEGNCYEGAFWFAVLLNLKHIFIYIAPAYFVFLLRNH 210
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A7S3YXA4_9EUKA (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YXA4_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 5.480e-20
Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 1 
Query:   55 ILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHC 264
            ++LN GL +VDH+HFQYNG L+G+L+L +AA+  G+     FLF+VL+N KH+FL V P  F+YLLRR+C
Sbjct:   18 VVLNPGLLLVDHIHFQYNGFLMGILLLSLAAIRRGEDLLGGFLFAVLLNFKHIFLYVAPLYFIYLLRRYC 87
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: UPI000359C0C9 (probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359C0C9)

HSP 1 Score: 92.8 bits (229), Expect = 6.730e-20
Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1 
Query:   34 PALTLLLILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRSGTIELLTHRF 300
            PA+   L++ N GLF+VDH+HFQYNG+L G+L+L +  +   +    AF F+VL+N KH+++ V PA FVYLLR +C +GT  +L  +F
Sbjct:  133 PAIIPALLIFNVGLFIVDHIHFQYNGILFGILLLSLVRITQNRVLEGAFWFAVLLNMKHIYMYVAPAYFVYLLRSYCFTGTGPVLWRKF 221
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A7S0TVE7_HEMAN (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TVE7_HEMAN)

HSP 1 Score: 85.9 bits (211), Expect = 9.830e-20
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 1 
Query:   52 LILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHC 264
            L + N GL + DH+HFQYNGMLLG+L+L  + L SG+    AFLF+V++N KHLFL++ P  F++LL+ HC
Sbjct:    9 LAVFNGGLCITDHIHFQYNGMLLGLLLLSASLLTSGRDLLGAFLFTVVINMKHLFLSLGPLYFIFLLKHHC 79
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BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Match: A0A084W923_ANOSI (ZnMc domain-containing protein n=1 Tax=Anopheles sinensis TaxID=74873 RepID=A0A084W923_ANOSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.360e-19
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 1 
Query:   52 LILLNAGLFMVDHVHFQYNGMLLGVLILGIAALDSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRSGT 276
            L+L NAGL MVDH+HFQYNG L GVL+L I AL   +P  +AFLF+VL+N KH+F+ V P   VYLLR +C  G+
Sbjct:  693 LLLGNAGLLMVDHIHFQYNGFLFGVLLLSIGALMENRPLQSAFLFAVLLNLKHIFIYVAPVYMVYLLRFYCLRGS 767
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107743.1643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L1JD67_GUITC3.670e-2255.56Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia t... [more]
A0A7S4KYE2_GUITH4.810e-2255.56Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia t... [more]
A0A7S4KY25_GUITH8.630e-2255.56Alpha-1,3-glucosyltransferase n=1 Tax=Guillardia t... [more]
A0A835T181_9CHLO2.030e-2057.14Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomona... [more]
A0A7R9BQV8_9CRUS2.760e-2053.09Alpha-1,3-glucosyltransferase n=1 Tax=Notodromas m... [more]
A0A3Q0IZI3_DIACI3.100e-2059.15Alpha-1,3-glucosyltransferase n=1 Tax=Diaphorina c... [more]
A0A7S3YXA4_9EUKA5.480e-2055.71Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=L... [more]
UPI000359C0C96.730e-2047.19probable dolichyl pyrophosphate Glc1Man9GlcNAc2 al... [more]
A0A7S0TVE7_HEMAN9.830e-2053.52Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=H... [more]
A0A084W923_ANOSI1.360e-1958.67ZnMc domain-containing protein n=1 Tax=Anopheles s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107743contigM-pyrifera_M_contig107743:239..538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score97.1
Seed ortholog evalue5.1e-18
Seed eggNOG ortholog55529.EKX46050
Preferred nameALG8
KEGG koko:K03849
KEGG ReactionR06263
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categorysignal peptide
GOsGO:0000030,GO:0000033,GO:0000902,GO:0000904,GO:0001703,GO:0002064,GO:0003381,GO:0003382,GO:0003383,GO:0003384,GO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0006928,GO:0007275,GO:0007369,GO:0007377,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010004,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0030029,GO:0030048,GO:0030154,GO:0030855,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0034645,GO:0036211,GO:0042175,GO:0042281,GO:0042283,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0048468,GO:0048598,GO:0048856,GO:0048869,GO:0060429,GO:0070085,GO:0070252,GO:0071704,GO:0071840,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2576@1,KOG2576@2759
EC2.4.1.265
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons1
Model size300
Cds size300
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815586.8025963-CDS-M-pyrifera_M_contig107743:238..5381622815586.8025963-CDS-M-pyrifera_M_contig107743:238..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107743 239..538 +
1692277475.9730892-CDS-M-pyrifera_M_contig107743:238..5381692277475.9730892-CDS-M-pyrifera_M_contig107743:238..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107743 239..538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107743.1643.1prot_M-pyrifera_M_contig107743.1643.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107743 239..538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107743.1643.1

>prot_M-pyrifera_M_contig107743.1643.1 ID=prot_M-pyrifera_M_contig107743.1643.1|Name=mRNA_M-pyrifera_M_contig107743.1643.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
WPRRAALGLHAPALTLLLILLNAGLFMVDHVHFQYNGMLLGVLILGIAAL
DSGKPYWAAFLFSVLVNAKHLFLAVCPAVFVYLLRRHCRSGTIELLTHRF
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mRNA from alignment at M-pyrifera_M_contig107743:239..538+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107743.1643.1 ID=mRNA_M-pyrifera_M_contig107743.1643.1|Name=mRNA_M-pyrifera_M_contig107743.1643.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig107743:239..538+ (Macrocystis pyrifera P11B4 male)
TGGCCACGAAGGGCGGCCCTAGGCCTCCATGCACCAGCACTGACGCTGTT
GCTGATCCTGCTCAACGCAGGCCTCTTCATGGTCGACCACGTGCACTTCC
AGTACAATGGAATGCTCTTGGGAGTGCTCATTCTTGGCATCGCAGCACTG
GACAGCGGGAAGCCCTACTGGGCTGCGTTTCTCTTCTCTGTACTCGTGAA
CGCCAAACATCTCTTCTTGGCTGTTTGTCCTGCAGTGTTTGTGTACCTTC
TCCGTCGTCATTGCCGCTCAGGTACGATCGAACTGCTTACGCACCGTTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107743:239..538+

>mRNA_M-pyrifera_M_contig107743.1643.1 ID=mRNA_M-pyrifera_M_contig107743.1643.1|Name=mRNA_M-pyrifera_M_contig107743.1643.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig107743:239..538+ (Macrocystis pyrifera P11B4 male)
TGGCCACGAAGGGCGGCCCTAGGCCTCCATGCACCAGCACTGACGCTGTT
GCTGATCCTGCTCAACGCAGGCCTCTTCATGGTCGACCACGTGCACTTCC
AGTACAATGGAATGCTCTTGGGAGTGCTCATTCTTGGCATCGCAGCACTG
GACAGCGGGAAGCCCTACTGGGCTGCGTTTCTCTTCTCTGTACTCGTGAA
CGCCAAACATCTCTTCTTGGCTGTTTGTCCTGCAGTGTTTGTGTACCTTC
TCCGTCGTCATTGCCGCTCAGGTACGATCGAACTGCTTACGCACCGTTTC
TGGCCACGAAGGGCGGCCCTAGGCCTCCATGCACCAGCACTGACGCTGTT
GCTGATCCTGCTCAACGCAGGCCTCTTCATGGTCGACCACGTGCACTTCC
AGTACAATGGAATGCTCTTGGGAGTGCTCATTCTTGGCATCGCAGCACTG
GACAGCGGGAAGCCCTACTGGGCTGCGTTTCTCTTCTCTGTACTCGTGAA
CGCCAAACATCTCTTCTTGGCTGTTTGTCCTGCAGTGTTTGTGTACCTTC
TCCGTCGTCATTGCCGCTCAGGTACGATCGAACTGCTTACGCACCGTTTC
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