mRNA_M-pyrifera_M_contig107730.1640.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A359E7A8_9BACT (Copper transporter (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A359E7A8_9BACT) HSP 1 Score: 279 bits (714), Expect = 1.330e-89 Identity = 137/205 (66.83%), Postives = 174/205 (84.88%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFP GE NF+YVYN MPAGT+L+ETNR+ ++EERV V+G++NPIVKSV+SNVA+GAN S SDPTPS+ KSKVSVEFV +QNRNGVSTQ +LN+IRE V+GIPGT I V+KE+SGPPTGKPINIEI+GD+F+QL+ +T F+ ++ ++I GIEEL+SDLQVN PE++I++D KANS+GI+N IG I TA+LG+PIS
Sbjct: 1 KVVFFPSGEPNFVYVYNEMPAGTDLDETNRINQKIEERVYEVIGRDNPIVKSVISNVAIGANPPSSSDPTPSATKSKVSVEFVYYQNRNGVSTQELLNEIRENVQGIPGTTITVDKEQSGPPTGKPINIEITGDEFEQLISLTENFKNYIQDQDIAGIEELRSDLQVNNPELIIDIDNEKANSYGISNVQIGTAIRTALLGSPIS 205
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A3D1G9L9_9BACT (Copper transporter (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G9L9_9BACT) HSP 1 Score: 281 bits (720), Expect = 8.630e-87 Identity = 139/205 (67.80%), Postives = 177/205 (86.34%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFF + E NFIYVYN MPAGT+L+ETNR+T E+E+RV VLG+NNPIVKSV+SNVA+GANS D+DPTPS NKSKVS+ FVDFQ+RNGVSTQ ILN+IRE VKGIPGTE+ VEK++ GP TGKPINIEISGD+F++L+ +T+RFQ+F+ + I+GIE+L+SDLQ++ PE++I+VD KANS+GI+ A +G T+ TA+LG PIS
Sbjct: 324 KVVFFSDSEPNFIYVYNEMPAGTSLDETNRITMELEDRVYEVLGENNPIVKSVISNVAVGANSRFDTDPTPSPNKSKVSISFVDFQDRNGVSTQDILNEIREKVKGIPGTEVTVEKDQRGPSTGKPINIEISGDEFEELITLTDRFQRFIENSGIKGIEDLQSDLQISNPELIIDVDETKANSYGISIAQVGSTLRTALLGDPIS 528
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A2D8CGP1_9BACT (Copper transporter n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CGP1_9BACT) HSP 1 Score: 283 bits (723), Expect = 1.630e-85 Identity = 138/205 (67.32%), Postives = 175/205 (85.37%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFP GE NF+YVYN MPAGT+L+ETNR+ ++EERV V+G++NPIVKSV+SNVA+GAN S SDPTPS+ KSKVSVEFVD+QNRNGVSTQ +LN+IRE V+GIPGT I V+KE+SGPPTGKPINIEI+GD+F+QL+ +T F+ ++ ++I GIEEL+SDLQVN PE++I++D KANS+GI+N IG I TA+LG+PIS
Sbjct: 608 KVVFFPSGEPNFVYVYNEMPAGTDLDETNRINQKIEERVYEVIGRDNPIVKSVISNVAIGANPPSSSDPTPSATKSKVSVEFVDYQNRNGVSTQELLNEIRENVQGIPGTTITVDKEQSGPPTGKPINIEITGDEFEQLISLTENFKNYIQDQDIAGIEELRSDLQVNNPELIIDIDNEKANSYGISNVQIGTAIRTALLGSPIS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A2D9FXK3_9BACT (Copper transporter n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FXK3_9BACT) HSP 1 Score: 271 bits (694), Expect = 2.030e-81 Identity = 135/205 (65.85%), Postives = 169/205 (82.44%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFPE E NF+YVYN MPAGT+L+ETNRV ++E+RV V+G++NP+VKSV+SNVA+GAN + DPTPS NKSKVSVEFVD+Q R+GVSTQ ILNQIRE V+ IP T + VEKE+SGPPTGKPINIEI+G+ F QL+ +T F+ F+ +NIEGIEEL+SDLQVN PEI+I++D KANS+GI+N +G I TA++G PIS
Sbjct: 608 KVVFFPESEPNFVYVYNEMPAGTDLDETNRVNKQLEDRVYEVIGRDNPVVKSVISNVAIGANPPNSIDPTPSPNKSKVSVEFVDYQYRDGVSTQEILNQIRENVQNIPNTTVTVEKEQSGPPTGKPINIEITGNDFGQLITLTEDFKDFIQEQNIEGIEELRSDLQVNNPEIIIDIDNEKANSYGISNVQVGSAIRTALIGEPIS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: UPI000CD865AB (efflux RND transporter permease subunit n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD865AB) HSP 1 Score: 271 bits (694), Expect = 2.030e-81 Identity = 133/205 (64.88%), Postives = 171/205 (83.41%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFPE E NF+YVYN MPAGT+L+ETNR+T ++E+RV V+G++NPIVKSV+SNV++GAN + DPTPS NKSKV+VEFVD+Q RNGVST+ +LN IR+ V+ IP T I VEKE++GPPTGKPINIEI+G+ F++L+ +T + F+ +NIEGIEEL+SDLQVN PEI+I++D KANS+GI+N IGGTI TA+LG PIS
Sbjct: 608 KVVFFPESEPNFVYVYNEMPAGTDLDETNRITRQIEDRVYEVIGRDNPIVKSVISNVSIGANPPNSIDPTPSPNKSKVTVEFVDYQYRNGVSTEDVLNDIRDNVQDIPNTTITVEKEQNGPPTGKPINIEITGESFEELITLTENVKTFIEDQNIEGIEELRSDLQVNNPEIIIDIDNEKANSYGISNVQIGGTIRTALLGEPIS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A521F6P4_9BACT (Multidrug efflux pump subunit AcrB n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521F6P4_9BACT) HSP 1 Score: 270 bits (690), Expect = 7.290e-81 Identity = 130/205 (63.41%), Postives = 172/205 (83.90%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFPE E NF+YVYN MP+GT+L+ET R+ ++EERV V+G++NPIVKSV+SNVA+GAN + DPTPS NKSKV+VEFVD+Q+R+GVSTQ ILN+IR+ V+ IPGT + VEKE++GPPTGKPINIEI+GD+F+QL+ +T R + F+ + IEGIEEL+SDLQ++ PEI++++D KANS+GI+N IG TI TA+LG P+S
Sbjct: 608 KVVFFPESEPNFVYVYNEMPSGTDLDETQRINQQIEERVYGVIGQDNPIVKSVISNVAIGANPPNSIDPTPSPNKSKVTVEFVDYQDRDGVSTQEILNEIRDNVQDIPGTTVTVEKEQNGPPTGKPINIEITGDEFEQLIALTERVKSFIQEQEIEGIEELRSDLQISNPEIIVDIDNEKANSYGISNVQIGSTIRTALLGEPVS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A5D3YL31_9BACT (Multidrug efflux pump subunit AcrB n=1 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YL31_9BACT) HSP 1 Score: 270 bits (689), Expect = 1.010e-80 Identity = 132/205 (64.39%), Postives = 169/205 (82.44%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFF E + NF+Y+YN MP GT+LE TN VT E+E+RV V+G++NPIVKSV+SNVA+GA S SD D T S+NKSKVS+ FVD+Q R GVSTQ ILN IR+ ++GIP EI+VE+E+SGPPTGKP+NIEI+G+ FD+LV ++N+ QQ++ S+NI GIEELKSDLQVN PEIL+N+D +KANS+ INNA +G I TA+LG P+S
Sbjct: 609 KVVFFSESQPNFVYIYNQMPVGTDLETTNEVTKEIEDRVYEVIGRDNPIVKSVISNVAVGAASRSDMDKTQSANKSKVSISFVDYQYRQGVSTQKILNDIRKNLRGIPSAEIVVEQEQSGPPTGKPVNIEIAGEDFDRLVSLSNKLQQYITSQNIAGIEELKSDLQVNNPEILVNIDEVKANSYNINNAQLGSQIRTALLGIPVS 813
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: UPI001F1F2A65 (efflux RND transporter permease subunit n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F1F2A65) HSP 1 Score: 265 bits (676), Expect = 6.900e-79 Identity = 132/205 (64.39%), Postives = 169/205 (82.44%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFPE + NF+YVYN MPAGT+L+ETNRV +EERV V+G++NPIVKSV+SNVA+GAN S DPTPS KSKVSVEFVD+Q+R+GVSTQ +LN+IRE V+ IP T I V+KE+SGP TGKPINIEISG++F QL+E+T+ F+ ++ +NI GIEEL+SDLQV PEI++++D KANS+GI+N +G I TA+LG+PIS
Sbjct: 608 KVVFFPESDPNFVYVYNEMPAGTDLDETNRVNRLIEERVYEVVGQDNPIVKSVISNVAIGANPPSSIDPTPSPTKSKVSVEFVDYQDRDGVSTQDLLNEIRENVQDIPNTIITVDKEQSGPSTGKPINIEISGEEFSQLIELTDEFKSYIEDQNIAGIEELRSDLQVTNPEIIVDIDNEKANSYGISNVQVGSAIRTALLGSPIS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: UPI001EDA2FE0 (efflux RND transporter permease subunit n=1 Tax=Rhodohalobacter sp. WB101 TaxID=2911366 RepID=UPI001EDA2FE0) HSP 1 Score: 264 bits (675), Expect = 9.390e-79 Identity = 128/205 (62.44%), Postives = 171/205 (83.41%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFFPE + NF YVYN MP+GT+L+ETN VT +E+RV V+G++NP VKSV+SNVA+GAN + DPTPS NKSKVSVEFVD+Q RNG+STQ ILN IR+ V+ IPGT + VE+E++GPPTGKPINIEI+G++FDQL+ +++R + F+ +++IEGIEEL+SDLQVN PEI+++++ KANS+GI+N +G T+ TA+LG PIS
Sbjct: 608 KVVFFPESDPNFAYVYNEMPSGTDLDETNNVTKMLEDRVYEVIGRDNPAVKSVISNVAIGANPPNSIDPTPSPNKSKVSVEFVDYQYRNGISTQQILNDIRDNVQDIPGTTVTVEQEQNGPPTGKPINIEITGEEFDQLITISDRLRNFIENQDIEGIEELRSDLQVNNPEIIVDINNEKANSYGISNVQVGSTLRTALLGEPIS 812
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Match: A0A2A2GDF0_9BACT (Copper transporter n=1 Tax=Aliifodinibius sp. WN023 TaxID=2032627 RepID=A0A2A2GDF0_9BACT) HSP 1 Score: 249 bits (637), Expect = 1.960e-73 Identity = 116/205 (56.59%), Postives = 170/205 (82.93%), Query Frame = 1
Query: 1 KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVKSVVSNVALGANSSSDSDPTPSSNKSKVSVEFVDFQNRNGVSTQTILNQIREVVKGIPGTEIIVEKEESGPPTGKPINIEISGDQFDQLVEVTNRFQQFVVSKNIEGIEELKSDLQVNKPEILINVDGIKANSFGINNAIIGGTISTAMLGTPIS 615
KVVFF E E N +Y+YN +P GT+LE TN VT ++E RV VLGK+NP+VKS+++NVA+GA ++ D TPS N+S++++ FVD+Q RNGVSTQ ++++IR+ VKGIPGT++ VE+E+ GPP+GKPINIE++GD+FD+L++++NR F+ S++IEGIE+L+SDLQ N PEI++++D IKANS+G++NA +G ++TA+LG PIS
Sbjct: 610 KVVFFAESEPNSVYIYNELPVGTDLEVTNDVTQKLERRVYDVLGKDNPVVKSIITNVAVGAAPPNEIDQTPSPNRSRIAISFVDYQYRNGVSTQALMDEIRDNVKGIPGTQVTVEQEQQGPPSGKPINIEVTGDEFDKLIDISNRLTSFIQSQDIEGIEQLRSDLQNNNPEIIVDIDEIKANSYGLSNAQLGMELNTALLGQPIS 814 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107730.1640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107730.1640.1 >prot_M-pyrifera_M_contig107730.1640.1 ID=prot_M-pyrifera_M_contig107730.1640.1|Name=mRNA_M-pyrifera_M_contig107730.1640.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp KVVFFPEGESNFIYVYNTMPAGTNLEETNRVTYEVEERVLSVLGKNNPIVback to top mRNA from alignment at M-pyrifera_M_contig107730:3..617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107730.1640.1 ID=mRNA_M-pyrifera_M_contig107730.1640.1|Name=mRNA_M-pyrifera_M_contig107730.1640.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig107730:3..617- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107730:3..617- >mRNA_M-pyrifera_M_contig107730.1640.1 ID=mRNA_M-pyrifera_M_contig107730.1640.1|Name=mRNA_M-pyrifera_M_contig107730.1640.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig107730:3..617- (Macrocystis pyrifera P11B4 male)back to top |