mRNA_M-pyrifera_M_contig107660.1637.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S3XZ48_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ48_HETAK) HSP 1 Score: 68.2 bits (165), Expect = 1.910e-13 Identity = 28/47 (59.57%), Postives = 41/47 (87.23%), Query Frame = 1
Query: 7 AEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
A+D++D+FS ARH RV ++ LLDAG+PV++RD++GN++L VACQNG
Sbjct: 13 AKDLEDVFSYARHNRVDDLERLLDAGMPVNIRDQYGNTVLCVACQNG 59
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S1TRF9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRF9_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 2.760e-12 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 1
Query: 10 EDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
+DV+DIFS ARH RV +M +LD G+PV+VRD++GN+LL V+CQNG
Sbjct: 141 KDVEDIFSYARHNRVEDMEAVLDRGVPVNVRDQYGNTLLIVSCQNG 186
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A5A8E191_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E191_CAFRO) HSP 1 Score: 67.4 bits (163), Expect = 5.320e-12 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1
Query: 1 LRAEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
L ++ VKD+FS+ARH RVA++ LLD G+PVD+ D GN++L VACQNG
Sbjct: 193 LSSDAVKDVFSLARHNRVADLTALLDRGVPVDIADAHGNTILIVACQNG 241
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S1C915_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C915_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.430e-11 Identity = 26/49 (53.06%), Postives = 38/49 (77.55%), Query Frame = 1
Query: 1 LRAEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
L ++V D+FS+ARH R E+ LLD G+PV++RD+ GN++L +ACQNG
Sbjct: 22 LSEKEVADVFSLARHNRCKEVEALLDRGVPVNLRDKHGNTILTIACQNG 70
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A482SIQ9_9ARCH (Ankyrin repeat domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SIQ9_9ARCH) HSP 1 Score: 65.1 bits (157), Expect = 3.840e-11 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 10 EDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
+DV+DIF RHGRV E+ LL G+PVD+RD +GN+LL +ACQNG
Sbjct: 194 QDVEDIFRFTRHGRVDEIEILLTKGVPVDIRDTYGNTLLIIACQNG 239
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A4SB19_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4SB19_OSTLU) HSP 1 Score: 61.6 bits (148), Expect = 6.290e-11 Identity = 25/48 (52.08%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 4 RAEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
+ +V+++FS ARHGR E+ +L+ G+P+D RDE GNS L +ACQNG
Sbjct: 9 KISEVRNLFSFARHGRYGELKKLIMKGVPLDARDEMGNSALIIACQNG 56
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A485KLK5_9STRA (Aste57867_8880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLK5_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.820e-10 Identity = 27/48 (56.25%), Postives = 41/48 (85.42%), Query Frame = 1
Query: 7 AEDVK-DIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
A+ VK D+FS+ARH RV ++ ++LD+G+PV+++D +GNSLL +ACQNG
Sbjct: 135 AKPVKADVFSLARHNRVDDVRDMLDSGLPVNIQDAYGNSLLLIACQNG 182
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S2MBB0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MBB0_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.980e-10 Identity = 26/45 (57.78%), Postives = 36/45 (80.00%), Query Frame = 1
Query: 13 DVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
DV+DIFS ARH R ++ LLD GIPV++RD+ GN++L ++CQNG
Sbjct: 119 DVEDIFSYARHNRFEDIERLLDQGIPVNIRDKTGNTILAISCQNG 163
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S3HME0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HME0_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.240e-10 Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 1 LRAEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
L +DV+D+FS ARHGR E+ L G+PVDVR++ GN++L VACQNG
Sbjct: 168 LSEKDVEDVFSYARHGRCEEIERLFAKGLPVDVRNDHGNTVLIVACQNG 216
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Match: A0A7S0PQ21_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PQ21_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 3.190e-10 Identity = 25/45 (55.56%), Postives = 37/45 (82.22%), Query Frame = 1
Query: 13 DVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNG 147
+++++FS ARHGR ++M +LL+ G+P+D RDE GNS L +ACQNG
Sbjct: 523 EMRNLFSFARHGRYSQMKDLLNKGVPIDARDENGNSALIIACQNG 567 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107660.1637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107660.1637.1 >prot_M-pyrifera_M_contig107660.1637.1 ID=prot_M-pyrifera_M_contig107660.1637.1|Name=mRNA_M-pyrifera_M_contig107660.1637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=49bp LRAEDVKDIFSMARHGRVAEMNELLDAGIPVDVRDEWGNSLLHVACQNGback to top mRNA from alignment at M-pyrifera_M_contig107660:461..607+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107660.1637.1 ID=mRNA_M-pyrifera_M_contig107660.1637.1|Name=mRNA_M-pyrifera_M_contig107660.1637.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=147bp|location=Sequence derived from alignment at M-pyrifera_M_contig107660:461..607+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107660:461..607+ >mRNA_M-pyrifera_M_contig107660.1637.1 ID=mRNA_M-pyrifera_M_contig107660.1637.1|Name=mRNA_M-pyrifera_M_contig107660.1637.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig107660:461..607+ (Macrocystis pyrifera P11B4 male)back to top |