mRNA_M-pyrifera_M_contig107651.1633.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: UPI0015939BC6 (HAMP domain-containing histidine kinase n=2 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI0015939BC6) HSP 1 Score: 392 bits (1008), Expect = 5.600e-134 Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG
Sbjct: 229 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A2M7LE49_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LE49_9SPHN) HSP 1 Score: 335 bits (858), Expect = 4.670e-111 Identity = 169/205 (82.44%), Postives = 192/205 (93.66%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G +E L EQGPPDTRELIRAFN MSGRVS+M+NEK+VMLGAIGHDLRTPLAALRVR+ENV+DDIERE+M+ GIED+D LDDILSLARLGRS+EQ++PVDIRS+IET+VDEFTDLGH+V YQRG+KQ A +RETL+RRALRNLIGN++LYGKAADISVEKSG+KLMI VDDDGPGI D+KIDAMFEPFLRG+ SRNRATGGSGLG
Sbjct: 243 GDSEDLAEQGPPDTRELIRAFNAMSGRVSSMINEKDVMLGAIGHDLRTPLAALRVRVENVEDDIERERMIAGIEDIDHTLDDILSLARLGRSAEQADPVDIRSLIETIVDEFTDLGHEVHYQRGDKQSALIRETLVRRALRNLIGNAILYGKAADISVEKSGNKLMIHVDDDGPGIADDKIDAMFEPFLRGDASRNRATGGSGLG 447
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A2D3RG52_9SPHN (Histidine kinase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RG52_9SPHN) HSP 1 Score: 330 bits (847), Expect = 1.410e-109 Identity = 167/205 (81.46%), Postives = 189/205 (92.20%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G TE LEEQGPPDTRELIRAFNDMSGRV+ M+ EK+VMLGAIGHDLRTPLAALRVR+ENV+D++ERE+MV GIE+M+ ML+DILSLARLGRS+EQS+PVDIRS+IETVVDEF+DLG VRYQRGEKQIA VRETL+RRALRNL+GN+ LYG ADISVEKSG L+I VDDDGPGIP+E+IDAMFEPFLRG+ SRNRATGGSGLG
Sbjct: 229 GTTEALEEQGPPDTRELIRAFNDMSGRVTRMIEEKDVMLGAIGHDLRTPLAALRVRVENVEDEVERERMVAGIEEMNNMLEDILSLARLGRSTEQSDPVDIRSLIETVVDEFSDLGRDVRYQRGEKQIAAVRETLVRRALRNLVGNATLYGTVADISVEKSGSSLLIHVDDDGPGIPEERIDAMFEPFLRGDASRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A2G2D8P9_9SPHN (Histidine kinase n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D8P9_9SPHN) HSP 1 Score: 327 bits (839), Expect = 2.280e-108 Identity = 168/205 (81.95%), Postives = 190/205 (92.68%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G+TE L EQGPPDTRELIRAFN MSGRV+ MLNEK+VMLGAIGHDLRTPLAALRVR+E+V+DD ERE+M+ GIED+D MLDDILSLARLGRS EQ++ VDIRS+IET+VDEFTDLGH+VRYQRGEKQ A +RETL+RRALRNLIGN++LYG+AADISVEKS DKLMI VDD+GPGIP+ KI+AMFEPFLRGE SRNRATGGSGLG
Sbjct: 229 GETEELPEQGPPDTRELIRAFNVMSGRVNAMLNEKDVMLGAIGHDLRTPLAALRVRVESVEDDGERERMIAGIEDIDHMLDDILSLARLGRSGEQADRVDIRSLIETIVDEFTDLGHEVRYQRGEKQSAVIRETLVRRALRNLIGNAILYGEAADISVEKSDDKLMIHVDDNGPGIPEGKIEAMFEPFLRGEASRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A127MF07_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MF07_9SPHN) HSP 1 Score: 325 bits (832), Expect = 2.600e-107 Identity = 164/205 (80.00%), Postives = 190/205 (92.68%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G++ L EQGPPDTRELIRAFNDMS RV+ M++EK+VMLGAIGHDLRTPLAALRVR+ENV+DD +REKM+ GIED+D LDDILSLARLGRS E S+PVDIRS+IET+VDEFTDLG++VRYQRG+KQIA VRETL+RRALRNLIGN++LYGKAADISVEKSGD+LMI VDDDGPGIP+ I++MFEPFLRG++SRNRATGGSGLG
Sbjct: 229 GESGELTEQGPPDTRELIRAFNDMSRRVNGMIDEKDVMLGAIGHDLRTPLAALRVRVENVEDDDDREKMIAGIEDIDHTLDDILSLARLGRSREHSDPVDIRSLIETIVDEFTDLGNEVRYQRGDKQIAPVRETLVRRALRNLIGNAILYGKAADISVEKSGDRLMIHVDDDGPGIPESTIESMFEPFLRGDDSRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A653JGU9_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JGU9_9SPHN) HSP 1 Score: 322 bits (825), Expect = 2.980e-106 Identity = 164/205 (80.00%), Postives = 186/205 (90.73%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G TETLEEQGPPDTRELIRAFNDMS RV+ M++EK+VMLGAIGHDLRTPLAALRVR+E+V+D+ ERE+MV GIEDM+ ML+DILSLARLGRS+EQ++PVDIRS+IETVVDEFTDLG VRYQRGEKQI VRETL+RRALRNL+GN+ LYGK ADISVEKS + L+I VDDDGPGIP+ KI MFEPFLRG+ SRNRATGGSGLG
Sbjct: 229 GTTETLEEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDETERERMVSGIEDMNNMLEDILSLARLGRSTEQADPVDIRSLIETVVDEFTDLGRDVRYQRGEKQIVAVRETLVRRALRNLVGNATLYGKLADISVEKSDNSLLIHVDDDGPGIPEAKISTMFEPFLRGDGSRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A220W3Z2_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W3Z2_9SPHN) HSP 1 Score: 317 bits (812), Expect = 2.740e-104 Identity = 160/205 (78.05%), Postives = 186/205 (90.73%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G TE L EQGPPDTRELIRAFNDMS RV+ M++EK+VMLGAIGHDLRTPLAALRVR+E+V+DD ERE+M+ GIEDM+ ML+DILSLARLGRS++Q++PVDIRS+IETVVDEFTDLG VRYQRGE+QIA VRETL+RRALRNL+GN+ LYG ADISVEK+G L++ VDD+GPGIP++KI AMFEPFLRGE SRNRATGGSGLG
Sbjct: 229 GTTEALAEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDDTERERMITGIEDMNNMLEDILSLARLGRSTQQADPVDIRSLIETVVDEFTDLGRTVRYQRGERQIAAVRETLVRRALRNLVGNATLYGGVADISVEKAGKNLLVHVDDEGPGIPEDKIAAMFEPFLRGEGSRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A1B6Z5M0_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z5M0_9SPHN) HSP 1 Score: 303 bits (776), Expect = 7.480e-99 Identity = 154/205 (75.12%), Postives = 177/205 (86.34%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G E LEE+GPPDTR+LIRAFNDMS RVS ML+EK+VMLGAIGHDLRTPLAALR+R+ENV+DD ER++M+ GIEDMDQ LDDILSLARLGRS EQS P DIRS+IETVVDE+ D+GH + YQRG +Q A +R TLIRRALRNLIGN+ YG + DI V+KS D+LMI VDDDGPGI +KI+AMFEPF+R EESRNRATGGSGLG
Sbjct: 229 GVNEALEERGPPDTRDLIRAFNDMSSRVSTMLDEKDVMLGAIGHDLRTPLAALRIRVENVEDDSERDRMIAGIEDMDQTLDDILSLARLGRSQEQSEPTDIRSLIETVVDEYKDMGHDISYQRGARQPAHIRATLIRRALRNLIGNAAKYGTSVDIIVDKSDDRLMIHVDDDGPGIAPDKIEAMFEPFVRAEESRNRATGGSGLG 433
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: A0A1N6F6L5_9SPHN (Histidine kinase n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6F6L5_9SPHN) HSP 1 Score: 280 bits (715), Expect = 1.390e-89 Identity = 143/205 (69.76%), Postives = 171/205 (83.41%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G ET+ E GPPDTR+LI AFN M+GRV ML+EK+VMLGAIGHDLRTPLAALRVRIENV DD+ERE+M+ GIEDMD+MLDDILSLARLGRS+E DI ++IETVVDEF DLG V ++RGE+ + V+E L+RRALRNL+ N++ YGK A ISV+KSGD L I VDD GPGIPD++I++MF+PF R EESR+RATGGSGLG
Sbjct: 233 GARETVPESGPPDTRQLISAFNAMNGRVGAMLDEKDVMLGAIGHDLRTPLAALRVRIENVADDVERERMIAGIEDMDRMLDDILSLARLGRSAEPMEATDICALIETVVDEFGDLGQDVSFERGERHVVKVQEVLLRRALRNLVSNAIAYGKNATISVDKSGDHLSIHVDDSGPGIPDDQIESMFDPFSRAEESRSRATGGSGLG 437
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Match: UPI001AA0345E (ATP-binding protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0345E) HSP 1 Score: 276 bits (707), Expect = 1.880e-88 Identity = 142/205 (69.27%), Postives = 173/205 (84.39%), Query Frame = 1
Query: 1 GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNSVLYGKAADISVEKSGDKLMIIVDDDGPGIPDEKIDAMFEPFLRGEESRNRATGGSGLG 615
G +E + E GPPDTR+L+ AFN M+GRV +ML+EK+VMLGAIGHDLRTPLAALRVR+E+V+DD ERE+M+ GI+DMD+ LDDILSLARLGRS E++ P DI ++IETV DE+TD+G +V + R + A +R TLIRRALRNLIGN+V YGK A I+V+KSGDKL+I VDD+GPGIP E+IDAMFEPF R E SRNRATGGSGLG
Sbjct: 229 GVSEPVVESGPPDTRQLMAAFNAMNGRVGSMLDEKDVMLGAIGHDLRTPLAALRVRVESVEDDNERERMIAGIDDMDRTLDDILSLARLGRSDERTEPTDISALIETVADEYTDMGEEVSFTRSGRITANIRATLIRRALRNLIGNAVKYGKQAAITVDKSGDKLVIHVDDEGPGIPVEQIDAMFEPFARAEISRNRATGGSGLG 433 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107651.1633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107651.1633.1 >prot_M-pyrifera_M_contig107651.1633.1 ID=prot_M-pyrifera_M_contig107651.1633.1|Name=mRNA_M-pyrifera_M_contig107651.1633.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=205bp GKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLback to top mRNA from alignment at M-pyrifera_M_contig107651:3..617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107651.1633.1 ID=mRNA_M-pyrifera_M_contig107651.1633.1|Name=mRNA_M-pyrifera_M_contig107651.1633.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=615bp|location=Sequence derived from alignment at M-pyrifera_M_contig107651:3..617- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107651:3..617- >mRNA_M-pyrifera_M_contig107651.1633.1 ID=mRNA_M-pyrifera_M_contig107651.1633.1|Name=mRNA_M-pyrifera_M_contig107651.1633.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1230bp|location=Sequence derived from alignment at M-pyrifera_M_contig107651:3..617- (Macrocystis pyrifera P11B4 male)back to top |