mRNA_M-pyrifera_M_contig107643.1629.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A6I6A7F4_9PLAN (Glycine oxidase ThiO n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A7F4_9PLAN) HSP 1 Score: 340 bits (871), Expect = 3.710e-115 Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGMTD 513
GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMD LPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPAL+EARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGMTD
Sbjct: 198 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDLLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALKEARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGMTD 368
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A518IB06_9PLAN (Hydrogen cyanide synthase subunit HcnC n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IB06_9PLAN) HSP 1 Score: 279 bits (713), Expect = 3.880e-91 Identity = 133/171 (77.78%), Postives = 153/171 (89.47%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGMTD 513
GRT+IAGGAWSPE+L++LGL CELVPIQGQIVLLSM+RLPF VIE G RYLVPRSDGR+LIGSTE ++GFNKQNTAEGV GLI+FA++LVP L+EA FERAWAGLRP+SID LPYLG VDG+ENL MAAGHYRDGLQLSPITA+L+RQLIC E ++ L+ FSCSRG+ D
Sbjct: 198 GRTVIAGGAWSPEVLSRLGLGCELVPIQGQIVLLSMNRLPFTQVIECGSRYLVPRSDGRILIGSTESNVGFNKQNTAEGVRGLIQFAESLVPCLKEATFERAWAGLRPKSIDSLPYLGSVDGYENLFMAAGHYRDGLQLSPITAKLMRQLICGEEVEMSLEPFSCSRGIQD 368
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A517V9K1_9PLAN (Hydrogen cyanide synthase subunit HcnC n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V9K1_9PLAN) HSP 1 Score: 278 bits (711), Expect = 7.100e-91 Identity = 129/169 (76.33%), Postives = 155/169 (91.72%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGM 507
G+T+IAGGAWSPE+L++LG++CELVP+QGQIVLLSM R+PF+ VIESG+RYLVPRSDG++LIGSTE+ GFNK+NTAEGVAGLI FAQ++VP L++A FERAWAGLRP+SIDGLPYLG VDG++NL+MAAGHYRDGLQLSPITARLIRQLICEE + LD F+C RG+
Sbjct: 198 GQTVIAGGAWSPELLSRLGIQCELVPVQGQIVLLSMKRIPFRQVIESGRRYLVPRSDGKILIGSTEKQAGFNKENTAEGVAGLIAFAQSVVPELKDATFERAWAGLRPKSIDGLPYLGRVDGYQNLIMAAGHYRDGLQLSPITARLIRQLICEEELSISLDPFACQRGI 366
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A517WW73_9PLAN (Hydrogen cyanide synthase subunit HcnC n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WW73_9PLAN) HSP 1 Score: 274 bits (701), Expect = 2.250e-89 Identity = 126/168 (75.00%), Postives = 155/168 (92.26%), Query Frame = 1
Query: 4 RTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGM 507
+T+IAGGAWS E+L++LG+ CELVP+QGQIVLLS++ LPF+ VIE G +YLVPRSDG++LIGSTE ++GFNK NTAEGV GLI+FAQ++VP+L+EA FERAWAGLRP+SIDGLPYLGFV+G++NLLMAAGHYRDGLQLSPITARL+RQLIC++ D+PL+ FSCSRGM
Sbjct: 199 KTVIAGGAWSSEVLSKLGINCELVPVQGQIVLLSVNCLPFRNVIECGSQYLVPRSDGKILIGSTESNVGFNKDNTAEGVGGLIQFAQSVVPSLKEATFERAWAGLRPKSIDGLPYLGFVEGYDNLLMAAGHYRDGLQLSPITARLVRQLICQQKLDLPLEPFSCSRGM 366
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A2E2C9P6_9PLAN (Glycine oxidase ThiO n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C9P6_9PLAN) HSP 1 Score: 269 bits (688), Expect = 2.150e-87 Identity = 125/169 (73.96%), Postives = 154/169 (91.12%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGM 507
G+T+IAGGAWSPE+L++LG++C+L+P+QGQIVLLSM RL F+ VIE+G+RYLVPRSDG++LIGSTE+ GFNK+NTAEGVAGLI FAQ++VP L+EA FERAWAGLRP+SIDGLPYLG V G++NL+MAAGHYRDGLQLSPITA+LIRQLIC E ++ L+ FSCSRG+
Sbjct: 198 GQTVIAGGAWSPEVLSRLGIQCDLIPVQGQIVLLSMKRLLFRQVIEAGRRYLVPRSDGKILIGSTEKQAGFNKENTAEGVAGLIAFAQSVVPGLKEATFERAWAGLRPKSIDGLPYLGRVAGYQNLIMAAGHYRDGLQLSPITAKLIRQLICGEEPEISLEPFSCSRGI 366
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A350KEQ1_9PLAN (Glycine oxidase ThiO (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KEQ1_9PLAN) HSP 1 Score: 262 bits (670), Expect = 1.070e-86 Identity = 122/168 (72.62%), Postives = 150/168 (89.29%), Query Frame = 1
Query: 4 RTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGM 507
+T++AGGAWS E+L++LG++CELVP+QGQIVLLSM+RLPF VIESG+RYLVPRSDG++LIGSTE+ +GF+K+ TAEG+AGLI FAQ++VP L EA FERAWAGLRP+SIDGLPYLG V+ ++NL+MAAGHYRDGLQLSPITA+LIRQLICEE + L FSC RG+
Sbjct: 53 QTVMAGGAWSSEVLSRLGIQCELVPVQGQIVLLSMNRLPFHQVIESGRRYLVPRSDGKILIGSTEKQVGFSKETTAEGIAGLIAFAQSVVPGLGEATFERAWAGLRPKSIDGLPYLGRVERYQNLIMAAGHYRDGLQLSPITAKLIRQLICEEELSISLAPFSCQRGI 220
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A517X9Y9_9PLAN (Hydrogen cyanide synthase subunit HcnC n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A517X9Y9_9PLAN) HSP 1 Score: 267 bits (682), Expect = 1.740e-86 Identity = 124/168 (73.81%), Postives = 152/168 (90.48%), Query Frame = 1
Query: 4 RTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSRGM 507
+T++AGGAWS E+L++LG++CELVP+QGQIVLLSM+RLPF+ VIESG+RYLVPRSDG++LIGSTE+ GF+K+NTAEG+AGLI FAQ++VP L EA FERAWAGLRP+SIDGLPYLG V+ ++NL+MAAGHYRDGLQLSPITA+LIRQLICEE + LD FSC RG+
Sbjct: 199 QTVMAGGAWSSEVLSRLGIRCELVPVQGQIVLLSMNRLPFRQVIESGRRYLVPRSDGKILIGSTEKQAGFSKENTAEGIAGLIAFAQSVVPGLGEATFERAWAGLRPKSIDGLPYLGRVERYQNLIMAAGHYRDGLQLSPITAKLIRQLICEEELSISLDPFSCQRGI 366
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A517ZNE2_9PLAN (Hydrogen cyanide synthase subunit HcnC n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZNE2_9PLAN) HSP 1 Score: 196 bits (497), Expect = 1.590e-58 Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSR 501
G+ +++ G+WS IL +G P++GQIVLLS LPF ++ SG++YLVPR DGR+L+G+T +GFNK NTAEG++GL++FA LVP L EA FERAWAGLRPRS DGLPYLG G ENL +A GH+RDGLQLSPIT L+ L+ E + LD ++C R
Sbjct: 198 GQFLVSAGSWSQHILQTVGCSVTTQPVRGQIVLLSAQPLPFGHILLSGRKYLVPRPDGRILVGATVESVGFNKTNTAEGLSGLLDFATGLVPCLAEATFERAWAGLRPRSADGLPYLGRAPGTENLFVATGHFRDGLQLSPITGTLMASLVLGEKPALCLDDYACDR 364
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A2E7RUS2_9PLAN (Glycine oxidase ThiO n=4 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7RUS2_9PLAN) HSP 1 Score: 194 bits (494), Expect = 5.370e-58 Identity = 95/167 (56.89%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSR 501
G+ ++A GAW+ +L+ G + P++GQIV LS LPF VI G RYLVPR DGR+L+GSTE +GF K+NTA+GVAGLI FA+ LVP L A FER W+GLRP S DG+PYLG V G +NLL+AAGH+R GLQLSP TA L+RQ++ + VP+D F C R
Sbjct: 204 GQFVMAAGAWTRRLLSGCGADVAIEPVRGQIVQLSARPLPFTRVIGLGSRYLVPRPDGRILVGSTEEWVGFQKENTADGVAGLIRFAEELVPGLAGAGFERCWSGLRPGSADGMPYLGPVPGHDNLLVAAGHFRAGLQLSPATAVLVRQMVLGQDLSVPVDPFRCDR 370
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Match: A0A2E7NW71_9PLAN (Glycine oxidase ThiO n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7NW71_9PLAN) HSP 1 Score: 189 bits (479), Expect = 9.460e-56 Identity = 93/167 (55.69%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 1 GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRYLVPRSDGRLLIGSTERDIGFNKQNTAEGVAGLIEFAQALVPALREARFERAWAGLRPRSIDGLPYLGFVDGFENLLMAAGHYRDGLQLSPITARLIRQLICEEPTDVPLDAFSCSR 501
G+ I+A GAW+ +L G + + P++GQIV L LPF VI G RYLVPR DGR+L+GSTE +GF K NTA+GVAGLI FA+ LVP+L ARFER W+GLRP + DGLP+LG V G +NL++AAGH+R GLQLSP TA L+RQL+ + V ++ F+C R
Sbjct: 204 GQFIVAAGAWTRRVLAGCGAELSIEPVRGQIVQLLARPLPFTRVIGLGARYLVPRPDGRILVGSTEEWVGFQKDNTADGVAGLIRFAEDLVPSLAGARFERCWSGLRPGAFDGLPFLGGVPGHDNLMVAAGHFRAGLQLSPATAVLMRQLVLGQDPLVGIEPFACQR 370 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107643.1629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107643.1629.1 >prot_M-pyrifera_M_contig107643.1629.1 ID=prot_M-pyrifera_M_contig107643.1629.1|Name=mRNA_M-pyrifera_M_contig107643.1629.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp GRTIIAGGAWSPEILTQLGLKCELVPIQGQIVLLSMDRLPFQAVIESGKRback to top mRNA from alignment at M-pyrifera_M_contig107643:103..618- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107643.1629.1 ID=mRNA_M-pyrifera_M_contig107643.1629.1|Name=mRNA_M-pyrifera_M_contig107643.1629.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=516bp|location=Sequence derived from alignment at M-pyrifera_M_contig107643:103..618- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107643:103..618- >mRNA_M-pyrifera_M_contig107643.1629.1 ID=mRNA_M-pyrifera_M_contig107643.1629.1|Name=mRNA_M-pyrifera_M_contig107643.1629.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1032bp|location=Sequence derived from alignment at M-pyrifera_M_contig107643:103..618- (Macrocystis pyrifera P11B4 male)back to top |