mRNA_M-pyrifera_M_contig107623.1619.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A7Y1ZXH4_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZXH4_9ACTN) HSP 1 Score: 212 bits (539), Expect = 6.070e-67 Identity = 109/152 (71.71%), Postives = 129/152 (84.87%), Query Frame = 1 Query: 1 AVSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVRFVGVP 456 A++GL+LNVRSLAFG+V+APALTGA+WQRA MSQLMIDE+TAV TA D++R RRYGYL G+GVFVVWNATT+ GHL+ S AGDL+ LGLDAAGPAAFLALLWPRL D RQL A+ GG VAV ++P TPPGVPIL +M+G++A R GVP Sbjct: 78 AIAGLLLNVRSLAFGVVLAPALTGAIWQRAAMSQLMIDESTAVATAQDELRWRRYGYLVAGMGVFVVWNATTVGGHLLFSGAGDLITDLGLDAAGPAAFLALLWPRLRDHRQLRTAVVGGIVAVLLVPLTPPGVPILAAMIGVLAGR-PGVP 228
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A6C7EHP2_ILUCY (AzlC family protein n=2 Tax=Ilumatobacter coccineus TaxID=467094 RepID=A0A6C7EHP2_ILUCY) HSP 1 Score: 202 bits (514), Expect = 2.590e-63 Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = 1 Query: 1 AVSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVRFV 447 A++GL+LNVRSLAFG++MAPAL GA WQRA MSQLMIDE+TAVGTA D+ R RRYGYLA G+GVFVVWN TTI+G +V S AGDL++ LGLD AGPAAFLALLWPRL+ R QLAVA+ G +A+ ++P P GVPIL SMV + A RFV Sbjct: 67 AIAGLLLNVRSLAFGVIMAPALAGAWWQRAWMSQLMIDESTAVGTAQDERRWRRYGYLAAGIGVFVVWNLTTIVGFVVFSEAGDLIDDLGLDVAGPAAFLALLWPRLSQRPQLAVAVTGALIALVVVPIAPAGVPILASMVAVFAARFV 215
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A524MYH3_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524MYH3_9ACTN) HSP 1 Score: 177 bits (450), Expect = 3.410e-53 Identity = 90/147 (61.22%), Postives = 113/147 (76.87%), Query Frame = 1 Query: 1 AVSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 A++GL+LNVRSLAFG++MA AL G W+RA MS LMIDE+TAVG A +++ RRYGYL G+GVFVVWN TTI+G +V S+AG ++ LGLDAA PAAFLALLWPRL+ Q A+ G +AV +IP+T PGVPIL SM+G+ R Sbjct: 96 AIAGLLLNVRSLAFGVIMADALAGPWWKRAAMSPLMIDESTAVGAAQEELHWRRYGYLVAGIGVFVVWNLTTIVGFVVFSDAGSMITDLGLDAAAPAAFLALLWPRLSSPPQRRTAITGALIAVVLIPFTAPGVPILASMLGVAVTR 242
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A349B431_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B431_9ACTN) HSP 1 Score: 160 bits (406), Expect = 1.010e-46 Identity = 86/155 (55.48%), Postives = 115/155 (74.19%), Query Frame = 1 Query: 7 SGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLAD---RRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVRFV-GVPT 459 +GL+LN+RSLAFG+++AP+LTG + RAL++QL+IDE+TAV T D+ R +RYG+LAGG+ VF VWN TT+ G L++S + LG DAA PAAFLALLWPRL R +A+AGG VA A +P TPPG+PILL+ +G++A R GVP+ Sbjct: 87 AGLLLNIRSLAFGVLLAPSLTGRVGTRALLAQLVIDESTAVATVQDEPRWQRYGFLAGGIAVFAVWNLTTVAGVLLASVDDGFITDLGFDAAAPAAFLALLWPRLVGDGGREGRRIAIAGGLVAAAAVPLTPPGIPILLAGLGVLAARTTRGVPS 241
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A7Y2N6R1_9ACTN (AzlC family ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N6R1_9ACTN) HSP 1 Score: 159 bits (403), Expect = 3.120e-46 Identity = 84/146 (57.53%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 4 VSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 V+G +L +RSLAFG+VMAPAL G W RA +SQLMIDE+ AVG D+R RR+GYLAGG+GVFV WN TILG + AGDLV +LG+DA PAAFLALLWPRL+D +Q +A G VA+ P PPG+PI+L+ + +R Sbjct: 86 VAGGLLALRSLAFGVVMAPALWGPFWWRAAVSQLMIDESLAVGALQTDLRWRRFGYLAGGIGVFVPWNLFTILGFTIFGGAGDLVTSLGIDATIPAAFLALLWPRLSDPKQRLIAGVGAVVAIVGAPLLPPGIPIVLAAAAVALLR 231
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A7Y2DK03_9ACTN (AzlC family ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DK03_9ACTN) HSP 1 Score: 158 bits (400), Expect = 7.690e-46 Identity = 83/145 (57.24%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 7 SGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 +G +LN+RS+AFG+VMAPAL G+LW R ++SQLMIDE+TAVG+A D+ RRYGYLAGGLGVFV+WN TILG V +AG+LV G+DA PA+FLALLWPRL Q + +AG +A+ P P GVPI+ S + +V R Sbjct: 84 AGALLNMRSMAFGVVMAPALKGSLWWRGVVSQLMIDESTAVGSAQKDLHWRRYGYLAGGLGVFVLWNLFTILGFTVLGSAGELVVTYGIDATIPASFLALLWPRLDSVEQRVLMVAGAAIALLGAPLLPAGVPIVASALAVVIYR 228
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A2E3XLT7_9BACT (Branched-chain amino acid ABC transporter permease n=5 Tax=Bacteria TaxID=2 RepID=A0A2E3XLT7_9BACT) HSP 1 Score: 144 bits (362), Expect = 3.220e-40 Identity = 76/145 (52.41%), Postives = 105/145 (72.41%), Query Frame = 1 Query: 7 SGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 +GL+LN+RSLAFG+ MAP+L G+ RA +SQLMIDE+TA+G++ LRRYGYL GGL VFV+WNATT++G V S A L+ LG+DA PAAFL L+W +L + + AVA+ G A+ +IP+TP G+P++ + I+ VR Sbjct: 75 AGLLLNLRSLAFGVSMAPSLKGSFLWRAGVSQLMIDESTAIGSSQATHELRRYGYLWGGLSVFVLWNATTLIGVSVLSEAESLITDLGIDATIPAAFLGLIWNKLENAKHRAVAVIGAITALILIPFTPAGIPVIAAASAIIWVR 219
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A2E9LEQ3_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E9LEQ3_9ACTN) HSP 1 Score: 144 bits (362), Expect = 3.220e-40 Identity = 76/145 (52.41%), Postives = 104/145 (71.72%), Query Frame = 1 Query: 7 SGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 +GL+LN+RSLAFG+ MAP+L G+L RA +SQLMIDE+TA+G++ + LRRYGYL GGL VFV+WN TT++G + +NA LV LG+DA PAAFL L+W +L VA G +A+ +IP+TP G+P++ S I+ VR Sbjct: 75 AGLLLNLRSLAFGVSMAPSLKGSLLWRAGISQLMIDESTAIGSSQNTHELRRYGYLWGGLSVFVLWNVTTLIGVSLLANADSLVTDLGIDATIPAAFLGLIWNKLEHATHRTVAFIGSLLAMILIPFTPAGIPVIASAFSIIWVR 219
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A2E4XI33_9ACTN (Branched-chain amino acid ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4XI33_9ACTN) HSP 1 Score: 142 bits (357), Expect = 1.730e-39 Identity = 72/146 (49.32%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 4 VSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 ++GL+LN+RSLAFG+ MAP+L G+ RAL SQLMIDEATAVG+A + LRRYGY+ GL VFV WN T +G + S G L+E LG+DA PAAFL L+WP+L+ + +A G +A ++P+ PPG+P++ + ++ +R Sbjct: 74 IAGLLLNLRSLAFGVAMAPSLQGSFLWRALTSQLMIDEATAVGSAQESHSLRRYGYIWAGLSVFVFWNFMTWVGVTLLSGTGSLIEDLGIDATIPAAFLGLVWPKLSSKDHRIIAGIGAALAFLLVPFVPPGIPVIAAASAVLFLR 219
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Match: A0A2E7HUQ2_9ACTN (Branched-chain amino acid ABC transporter permease n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7HUQ2_9ACTN) HSP 1 Score: 141 bits (355), Expect = 3.460e-39 Identity = 74/146 (50.68%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 4 VSGLMLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYGYLAGGLGVFVVWNATTILGHLVSSNAGDLVEALGLDAAGPAAFLALLWPRLADRRQLAVALAGGCVAVAMIPWTPPGVPILLSMVGIVAVR 441 V+GL+ N+RSLAFG+VMAP+L G+L RAL SQLMIDEATAVG++ D LRRYGYL GL VFV+WN T +G + S G L+E LG+DA PAAFL L+WP+ + +A+ G +A ++P PPG+P++ + ++ +R Sbjct: 74 VAGLLXNLRSLAFGVVMAPSLQGSLLWRALTSQLMIDEATAVGSSQDSNALRRYGYLWAGLSVFVLWNFMTWVGVSLLSGTGTLIEDLGIDATIPAAFLGLVWPKFSSNDHRKLAVIGILLAFILVPLVPPGIPVIAAASAVIFLR 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107623.1619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107623.1619.1 >prot_M-pyrifera_M_contig107623.1619.1 ID=prot_M-pyrifera_M_contig107623.1619.1|Name=mRNA_M-pyrifera_M_contig107623.1619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp MLNVRSLAFGIVMAPALTGALWQRALMSQLMIDEATAVGTAVDDVRLRRYback to top mRNA from alignment at M-pyrifera_M_contig107623:3..461+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107623.1619.1 ID=mRNA_M-pyrifera_M_contig107623.1619.1|Name=mRNA_M-pyrifera_M_contig107623.1619.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig107623:3..461+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107623:3..461+ >mRNA_M-pyrifera_M_contig107623.1619.1 ID=mRNA_M-pyrifera_M_contig107623.1619.1|Name=mRNA_M-pyrifera_M_contig107623.1619.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig107623:3..461+ (Macrocystis pyrifera P11B4 male)back to top |