mRNA_M-pyrifera_M_contig107600.1614.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: E6ZEQ5_ECTSI (Ribosomal protein S2 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZEQ5_ECTSI) HSP 1 Score: 299 bits (766), Expect = 1.150e-101 Identity = 149/167 (89.22%), Postives = 157/167 (94.01%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 M NKKHSRLFSLFIGSSGYLVPFPRNEYS ISKTLHPFLLGKRNIY FYDLEKSLYGIRATIEVLKNII+SEGKILFIG +VSMQSRFG+DSNINF+K +RGSI KSKDADLV LT VEKENLVEAHRKCLLLVGVGS TMS++SYPFNLNIESP LSDWFFGT+YT Sbjct: 1 MFNKKHSRLFSLFIGSSGYLVPFPRNEYSQISKTLHPFLLGKRNIYSFYDLEKSLYGIRATIEVLKNIISSEGKILFIGDDVSMQSRFGQDSNINFLKWERGSITKSKDADLVLLTSVEKENLVEAHRKCLLLVGVGSSTMSRISYPFNLNIESPFLSDWFFGTVYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A089N0W8_PETFA (Ribosomal protein S2 n=1 Tax=Petalonia fascia TaxID=2893 RepID=A0A089N0W8_PETFA) HSP 1 Score: 262 bits (669), Expect = 4.860e-87 Identity = 129/167 (77.25%), Postives = 147/167 (88.02%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 MLNKK +RL S FIGSSGYLVP P NEY ISKT+HPF+LGKRNI+YFY+LEKSLYGIRAT+EV KNI+A+EGKILFI + + RFG++ +IN IK KRG++AKSK+ADLVFL GVEKENLVEAHRKCLLLVGVGS TMSKVSYPFNLNIESP LSDWFFG++YT Sbjct: 1 MLNKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHYFYNLEKSLYGIRATMEVFKNIVATEGKILFISNSFPLHRRFGKEPDINCIKWKRGTLAKSKEADLVFLDGVEKENLVEAHRKCLLLVGVGSCTMSKVSYPFNLNIESPLLSDWFFGSIYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A0U1XC74_SCYLO (Ribosomal protein S2 n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A0U1XC74_SCYLO) HSP 1 Score: 257 bits (656), Expect = 4.330e-85 Identity = 126/167 (75.45%), Postives = 143/167 (85.63%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 MLNKK +RL S FIGSSGYLVP P NEY ISKT+HPF+LGKRNI++FYDLEKSLYGIRAT+EV KNI+AS GKILF+ + ++ RF ++ NIN IK KRGS+AKSKD DLVFL GVEKENLVEAHRKCLLLVGVGS TMSK+SYPFNLN+ESP LSDWF G +YT Sbjct: 1 MLNKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHHFYDLEKSLYGIRATMEVFKNIVASGGKILFVSNSFPLRRRFAKEQNINCIKWKRGSLAKSKDVDLVFLDGVEKENLVEAHRKCLLLVGVGSPTMSKISYPFNLNLESPLLSDWFLGAIYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A3G5FPL4_9PHAE (Ribosomal protein S2 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPL4_9PHAE) HSP 1 Score: 255 bits (651), Expect = 2.960e-84 Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTM 495 MLNKKH+RL SLF+G SGYLVP P NEY ISKT++PFLLGKRNIYYFYDLEKSLYGIRAT+EVLKNI+A+EGK+LFI + SRF +N+N IK KRGS+AKSK+ADLVFL+GVEKENLVEAHRKCLLLVG+GS TMSK+SYPFNLN SP LSDW FG + Sbjct: 1 MLNKKHARLISLFVGYSGYLVPRPYNEYVKISKTIYPFLLGKRNIYYFYDLEKSLYGIRATMEVLKNIVANEGKVLFISDSPVLHSRFNLGANLNCIKWKRGSLAKSKNADLVFLSGVEKENLVEAHRKCLLLVGIGSSTMSKISYPFNLNCNSPLLSDWLFGAL 165
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A0U1XD09_9PHAE (Ribosomal protein S2 n=1 Tax=Colpomenia peregrina TaxID=27965 RepID=A0A0U1XD09_9PHAE) HSP 1 Score: 248 bits (634), Expect = 9.670e-82 Identity = 121/167 (72.46%), Postives = 142/167 (85.03%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 M+NKK +RL S FIGSSGYLVP P NEY ISKT+HPFLLGKRNI+YFY+LEKSLYGIRAT+EV KNII++ G ILFI + ++ RF ++ NIN I+ KRGSI+KSK+ADLV L GVEKENL+EAHRKCLLLVG+GS TMSK+SYPFNLNIESP +SDWF G +YT Sbjct: 1 MINKKQARLLSFFIGSSGYLVPRPYNEYVKISKTMHPFLLGKRNIHYFYNLEKSLYGIRATMEVFKNIISNGGNILFISNSSVLRQRFSKEPNINCIQWKRGSISKSKNADLVILDGVEKENLIEAHRKCLLLVGIGSSTMSKISYPFNLNIESPLISDWFLGVLYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: Q94Z20_PYLLI (Ribosomal protein S2 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z20_PYLLI) HSP 1 Score: 248 bits (634), Expect = 1.350e-81 Identity = 119/167 (71.26%), Postives = 143/167 (85.63%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 M+NKKH RL S FIGSSGYLVP P+NEY ISKT+H +LLGKRN +YFY+LEKSLYGIRAT+EV KNI+A EGKIL I + ++++SRF +SNIN++K KRGS++KS+D DLVFL+GV +ENLVEAHRKCLLL GVGS TMSK++YP NLNIESP LSDWF G +YT Sbjct: 1 MVNKKHERLLSFFIGSSGYLVPRPQNEYVKISKTMHCYLLGKRNNFYFYNLEKSLYGIRATLEVFKNIVAKEGKILLISNSLTLESRFALESNINYLKWKRGSLSKSQDVDLVFLSGVNRENLVEAHRKCLLLSGVGSSTMSKIAYPVNLNIESPLLSDWFLGALYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A2H4ZR15_9PHAE (Ribosomal protein S2 n=2 Tax=Endarachne binghamiae TaxID=698476 RepID=A0A2H4ZR15_9PHAE) HSP 1 Score: 244 bits (624), Expect = 3.440e-80 Identity = 122/167 (73.05%), Postives = 139/167 (83.23%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 M NK +RL S IGSSGYLVP P NEY ISKT+HPF+LGKRNI+YFY+LEKS+YGIRAT+EV KNII++EGK LFI + + RF ++ NIN IK KRG +AKSKDADLVFL GVEKENLVEAHRKCLLLVGVGS TMSK+SYPFNLNIES L+DWFFG +YT Sbjct: 1 MKNKNQARLLSFLIGSSGYLVPRPYNEYVKISKTMHPFILGKRNIHYFYNLEKSVYGIRATMEVFKNIISNEGKTLFISNSFPLSQRFVKEPNINCIKWKRGVLAKSKDADLVFLDGVEKENLVEAHRKCLLLVGVGSPTMSKISYPFNLNIESSLLTDWFFGIIYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A1I9LW48_9PHAE (Ribosomal protein S2 n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW48_9PHAE) HSP 1 Score: 240 bits (613), Expect = 1.980e-78 Identity = 118/167 (70.66%), Postives = 140/167 (83.83%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMYT 501 MLNKK +RL LFI SGYLVP P N+Y ISKT+HPFL+GKR+IYYFY+LEKSLYGIRAT+EV KNI+A+EGKILFI + +QS F D NI+ IK KRGSI KSK+ADLVFL+ + KEN+VEAHRKCLLLVG+GS TMSK++YPFNLN++S LSDWFFG +YT Sbjct: 1 MLNKKDARLLFLFIRYSGYLVPRPLNDYVKISKTMHPFLVGKRDIYYFYELEKSLYGIRATLEVFKNIVANEGKILFISDSLPLQSCFSRDPNIDCIKWKRGSILKSKNADLVFLSNINKENMVEAHRKCLLLVGLGSPTMSKIAYPFNLNLDSSFLSDWFFGAIYT 167
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A8F0FDQ0_9PHAE (Ribosomal protein S2 n=9 Tax=Alariaceae TaxID=2887 RepID=A0A8F0FDQ0_9PHAE) HSP 1 Score: 236 bits (602), Expect = 1.480e-76 Identity = 119/166 (71.69%), Postives = 135/166 (81.33%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMY 498 M+ +HSRL S IGSSGYLVP P NEY ISKT+HP+LLGKRNIYYFY+LEKSLYGIRAT+EVLKNII SEGKILFI ++ + NI++IK KR +AKSKD DLVFL+ +EKENLVEAHRKCLLLVGVGS TMSKVSYPFNLNIESP L+ WFF +Y Sbjct: 1 MVKTEHSRLLSFLIGSSGYLVPRPFNEYVRISKTIHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKNIILSEGKILFISDSPLLKICLSHEPNISYIKWKRSYLAKSKDVDLVFLSDIEKENLVEAHRKCLLLVGVGSPTMSKVSYPFNLNIESPLLASWFFSLIY 166
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Match: A0A4D6E4R0_9PHAE (Ribosomal protein S2 n=1 Tax=Nereocystis luetkeana TaxID=117523 RepID=A0A4D6E4R0_9PHAE) HSP 1 Score: 234 bits (596), Expect = 1.130e-75 Identity = 118/166 (71.08%), Postives = 136/166 (81.93%), Query Frame = 1 Query: 1 MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDLEKSLYGIRATIEVLKNIIASEGKILFIGHEVSMQSRFGEDSNINFIKCKRGSIAKSKDADLVFLTGVEKENLVEAHRKCLLLVGVGSFTMSKVSYPFNLNIESPSLSDWFFGTMY 498 M+ +HSRL S IGSSGYLVP P NE ISKT+HP+LLGKRNIYYFY+LEKSLYGIRAT+EVLKNII++EGKILF+ ++ +SNI++IK KR +AKSKDADLV L+ +EKENLVEAHRKCLLLVGVGS TMSKVSYPFNLNIESP LS WFF +Y Sbjct: 1 MIRTEHSRLISFLIGSSGYLVPRPFNEDVLISKTMHPYLLGKRNIYYFYNLEKSLYGIRATLEVLKNIISAEGKILFVSDSPLLKICISHESNISYIKWKRSYLAKSKDADLVVLSNIEKENLVEAHRKCLLLVGVGSPTMSKVSYPFNLNIESPLLSSWFFSLIY 166 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107600.1614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107600.1614.1 >prot_M-pyrifera_M_contig107600.1614.1 ID=prot_M-pyrifera_M_contig107600.1614.1|Name=mRNA_M-pyrifera_M_contig107600.1614.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp MLNKKHSRLFSLFIGSSGYLVPFPRNEYSPISKTLHPFLLGKRNIYYFYDback to top mRNA from alignment at M-pyrifera_M_contig107600:3..503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107600.1614.1 ID=mRNA_M-pyrifera_M_contig107600.1614.1|Name=mRNA_M-pyrifera_M_contig107600.1614.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig107600:3..503- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107600:3..503- >mRNA_M-pyrifera_M_contig107600.1614.1 ID=mRNA_M-pyrifera_M_contig107600.1614.1|Name=mRNA_M-pyrifera_M_contig107600.1614.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig107600:3..503- (Macrocystis pyrifera P11B4 male)back to top |