mRNA_M-pyrifera_M_contig107599.1612.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A1B6J6Z0_9HEMI (MMS1_N domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6J6Z0_9HEMI) HSP 1 Score: 206 bits (525), Expect = 3.290e-62 Identity = 109/213 (51.17%), Postives = 139/213 (65.26%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++KV L+ + D V +++KYFDTVPVA + +M+ FLF AAE GNH L Q G DD EP F PR L NL ++DE+++LSP+L Q ADL E TPQLY CG G SS+R+LRHGL V E+A S P P WTVKK VDDE+D+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 36 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLEIDEDMVTEIKLKYFDTVPVATAMCVMKTGFLFVAAEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMDSLSPILACQVADLANEDTPQLYMACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEYDAYIIVSFVNATLVLSIGETVEEVADS 248
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A183IFI5_9BILA (MMS1_N domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IFI5_9BILA) HSP 1 Score: 213 bits (542), Expect = 6.190e-61 Identity = 112/213 (52.58%), Postives = 142/213 (66.67%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 ++IV A + + FFF+LQ+E GD++KV L+ D V +++KYFDT+ VAN + +++ FLF AAE GNH L Q K G DD EP F PR L NL ++DELE+LSP++ Q ADL E TPQLY CG G SSL++LRHGL V E+A S P P WTVKKH+DDE+DSYIVVSFVNAT+VLSIG TVEEV ++ Sbjct: 285 ILIVCSATHKTKSMFFFLLQTEQGDVFKVTLETMEDLVTEIKIKYFDTISVANSICVLKTGFLFVAAEFGNHYLYQIAKLGDDDDEPEFSSKIPLEEGDTFFFAPRPLQNLVLVDELESLSPIMSCQIADLANEDTPQLYVACGRGPKSSLKVLRHGLEVSEMAVSELPGNPNAVWTVKKHIDDEYDSYIVVSFVNATLVLSIGETVEEVTDS 497
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A812HUH2_9DINO (Sf3b3 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HUH2_9DINO) HSP 1 Score: 205 bits (522), Expect = 1.940e-60 Identity = 106/210 (50.48%), Postives = 139/210 (66.19%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPA-------------ARFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEV 591 ++IV+HA + +D FFF++QSE GDLYKV L ++ D V V+VKYFDTVP++N L +++ FLF AAE GNH L QF G+D+E F PR+L NL + DE+ +LSP++ M+ D E PQLY +CG G +SLR+LRHGL+V E+A S P P WTVK +D E+D YIVVSFV+ T+VLSIG TVEEV Sbjct: 153 LLIVAHATHKLKDFFFFLIQSEYGDLYKVTLTHDEDLVSEVQVKYFDTVPLSNALCVLKTGFLFAAAEFGNHALYQFQGIGTDEEDPMCTSSHPHGAQALVAFKPRALKNLMLYDEMPSLSPIIDMKVLDATGEGKPQLYAMCGRGPRASLRVLRHGLAVTEMAVSELPGKPNAVWTVKATMDSEYDRYIVVSFVDVTLVLSIGDTVEEV 362
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A2I3HKC8_NOMLE (Splicing factor 3b subunit 3 n=4 Tax=Simiiformes TaxID=314293 RepID=A0A2I3HKC8_NOMLE) HSP 1 Score: 202 bits (515), Expect = 2.600e-60 Identity = 106/213 (49.77%), Postives = 139/213 (65.26%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++K+ L+ + D V + +KYFDTVPVA + +++ FLF A+E GNH L Q G DDE P F PR L NL ++DEL++LSP+L Q ADL E TPQLY CG G SSLR+LRHGL V E+A S P P WTV++H++DEFD+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 1 MIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 213
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A015IPZ0_RHIIW (Rse1p n=12 Tax=Glomeromycetes TaxID=214506 RepID=A0A015IPZ0_RHIIW) HSP 1 Score: 212 bits (539), Expect = 5.690e-60 Identity = 114/214 (53.27%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSD-DEP--------------AARFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPE 597 +IIV+ + + + FFF+LQSE GD+YKV LDYE D V +++KYFDTVPVA L I+R FLF AAE GNH L F G D DEP +A FTPR L NL+ DELE+L+P++ + +L + TPQLY LCG GA S+ RILRHGL + E+A S P P WT K DDEFD+YI+VSFVNAT+VLSIG TVEEV + Sbjct: 284 LIIVAGVMHKMKGVFFFLLQSEEGDIYKVTLDYEDDKVNAIKIKYFDTVPVAASLCILRAGFLFVAAEFGNHRLYSFTSLGDDNDEPEWSSDEFMDSDTDISAYFTPRDLQNLERADELESLNPLIDAKVLNLTDDDTPQLYALCGRGAGSTFRILRHGLEISEMAVSELPGNPNAVWTTKLKSDDEFDAYIIVSFVNATLVLSIGETVEEVTD 497
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: UPI0003F0B8FA (LOW QUALITY PROTEIN: splicing factor 3B subunit 3 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B8FA) HSP 1 Score: 211 bits (537), Expect = 6.250e-60 Identity = 110/213 (51.64%), Postives = 142/213 (66.67%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++K+ L+ + D V + +KYFDTVPVAN LS+++ FLF AAE GNH L Q G DDE P F PR+L NL ++DE+E+LSP+L Q ADL E TPQLY CG G+ SS+RILRHGL V E+A S P P WTV+K ++DEFD+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 59 MIFVCSAAHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRMKYFDTVPVANTLSVLKTGFLFLAAEFGNHFLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFAPRTLKNLVLVDEMESLSPILSCQIADLANEDTPQLYSACGRGSRSSIRILRHGLEVSEMAVSELPGNPNAVWTVRKTIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 271
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A1B6L7D0_9HEMI (MMS1_N domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L7D0_9HEMI) HSP 1 Score: 206 bits (525), Expect = 1.330e-59 Identity = 109/213 (51.17%), Postives = 139/213 (65.26%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++KV L+ + D V +++KYFDTVPVA + +M+ FLF AAE GNH L Q G DD EP F PR L NL ++DE+++LSP+L Q ADL E TPQLY CG G SS+R+LRHGL V E+A S P P WTVKK VDDE+D+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 285 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLEIDEDMVTEIKLKYFDTVPVATAMCVMKTGFLFVAAEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMDSLSPILACQVADLANEDTPQLYMACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEYDAYIIVSFVNATLVLSIGETVEEVADS 497
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A2T7NJ16_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NJ16_POMCA) HSP 1 Score: 210 bits (534), Expect = 2.400e-59 Identity = 106/213 (49.77%), Postives = 143/213 (67.14%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPAA-------------RFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF++Q+E GD++KV L+ + D V + +KYFDTVPVA+ + +++ FLF AAE GNH L Q V G DD+ F PR+L NL ++DE+++LSP+L Q ADL E TPQ+Y LCG G S+LR+LRHGL V E+A S P P WTVK+H+DDE+D+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 180 MIFVCSATHKTKSMFFFLVQTEQGDIFKVTLETDEDIVTEIRLKYFDTVPVASSMCVLKSGFLFIAAEFGNHYLYQIVHLGEDDDEVTFSSATPIEEGDTFLFAPRALKNLAMVDEMDSLSPILTTQIADLVNEDTPQIYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRHIDDEYDAYIIVSFVNATLVLSIGETVEEVTDS 392
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A0S7EVK3_9TELE (SF3B3 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7EVK3_9TELE) HSP 1 Score: 202 bits (513), Expect = 3.090e-59 Identity = 105/213 (49.30%), Postives = 138/213 (64.79%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++KV L+ + + V + +KYFDT+PVA + +++ FLF A+E GNH L Q G DDE P F PR L NL ++DE ENLSP++ Q ADL E TPQLY CG G S+LR+LRHGL V E+A S P P WTV++HV+DEFD+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 230 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDTPQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 442
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: T1J553_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J553_STRMM) HSP 1 Score: 209 bits (531), Expect = 6.960e-59 Identity = 107/213 (50.23%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPAAR-------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600 +I V A + + FFF+ Q+E GD++K+ L+ + D V +++KYFDT+PVA +++++ FLF A+E NH L Q G DD+ A F PRSL NL ++DELE+LSP++ Q ADL E TPQLY +CG G+ SSLRILRHGL V E+A S P P WTVKK DDEFD+YI+VSFVNAT+VLSIG TVEEV ++ Sbjct: 285 LIFVCSATHKTKSMFFFLAQTEQGDIFKITLEVDDDMVTEIKLKYFDTIPVATAMNVLKTGFLFVASEFSNHYLYQIAHLGDDDDEAEFTSATPLEEGDTFFFAPRSLRNLVLVDELESLSPIMSCQIADLANEDTPQLYTMCGVGSRSSLRILRHGLEVSEMAVSELPGNPNAVWTVKKKSDDEFDAYIIVSFVNATLVLSIGETVEEVTDS 497 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107599.1612.1 >prot_M-pyrifera_M_contig107599.1612.1 ID=prot_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPback to top mRNA from alignment at M-pyrifera_M_contig107599:4..603+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107599.1612.1 ID=mRNA_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig107599:4..603+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107599:4..603+ >mRNA_M-pyrifera_M_contig107599.1612.1 ID=mRNA_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig107599:4..603+ (Macrocystis pyrifera P11B4 male)back to top |