mRNA_M-pyrifera_M_contig107599.1612.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107599.1612.1
Unique NamemRNA_M-pyrifera_M_contig107599.1612.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A1B6J6Z0_9HEMI (MMS1_N domain-containing protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6J6Z0_9HEMI)

HSP 1 Score: 206 bits (525), Expect = 3.290e-62
Identity = 109/213 (51.17%), Postives = 139/213 (65.26%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++KV L+ + D V  +++KYFDTVPVA  + +M+  FLF AAE GNH L Q    G DD EP               F PR L NL ++DE+++LSP+L  Q ADL  E TPQLY  CG G  SS+R+LRHGL V E+A S  P  P   WTVKK VDDE+D+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:   36 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLEIDEDMVTEIKLKYFDTVPVATAMCVMKTGFLFVAAEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMDSLSPILACQVADLANEDTPQLYMACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEYDAYIIVSFVNATLVLSIGETVEEVADS 248          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A183IFI5_9BILA (MMS1_N domain-containing protein n=1 Tax=Soboliphyme baturini TaxID=241478 RepID=A0A183IFI5_9BILA)

HSP 1 Score: 213 bits (542), Expect = 6.190e-61
Identity = 112/213 (52.58%), Postives = 142/213 (66.67%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            ++IV  A  + +  FFF+LQ+E GD++KV L+   D V  +++KYFDT+ VAN + +++  FLF AAE GNH L Q  K G DD EP               F PR L NL ++DELE+LSP++  Q ADL  E TPQLY  CG G  SSL++LRHGL V E+A S  P  P   WTVKKH+DDE+DSYIVVSFVNAT+VLSIG TVEEV ++
Sbjct:  285 ILIVCSATHKTKSMFFFLLQTEQGDVFKVTLETMEDLVTEIKIKYFDTISVANSICVLKTGFLFVAAEFGNHYLYQIAKLGDDDDEPEFSSKIPLEEGDTFFFAPRPLQNLVLVDELESLSPIMSCQIADLANEDTPQLYVACGRGPKSSLKVLRHGLEVSEMAVSELPGNPNAVWTVKKHIDDEYDSYIVVSFVNATLVLSIGETVEEVTDS 497          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A812HUH2_9DINO (Sf3b3 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812HUH2_9DINO)

HSP 1 Score: 205 bits (522), Expect = 1.940e-60
Identity = 106/210 (50.48%), Postives = 139/210 (66.19%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPA-------------ARFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEV 591
            ++IV+HA  + +D FFF++QSE GDLYKV L ++ D V  V+VKYFDTVP++N L +++  FLF AAE GNH L QF   G+D+E                 F PR+L NL + DE+ +LSP++ M+  D   E  PQLY +CG G  +SLR+LRHGL+V E+A S  P  P   WTVK  +D E+D YIVVSFV+ T+VLSIG TVEEV
Sbjct:  153 LLIVAHATHKLKDFFFFLIQSEYGDLYKVTLTHDEDLVSEVQVKYFDTVPLSNALCVLKTGFLFAAAEFGNHALYQFQGIGTDEEDPMCTSSHPHGAQALVAFKPRALKNLMLYDEMPSLSPIIDMKVLDATGEGKPQLYAMCGRGPRASLRVLRHGLAVTEMAVSELPGKPNAVWTVKATMDSEYDRYIVVSFVDVTLVLSIGDTVEEV 362          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A2I3HKC8_NOMLE (Splicing factor 3b subunit 3 n=4 Tax=Simiiformes TaxID=314293 RepID=A0A2I3HKC8_NOMLE)

HSP 1 Score: 202 bits (515), Expect = 2.600e-60
Identity = 106/213 (49.77%), Postives = 139/213 (65.26%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++K+ L+ + D V  + +KYFDTVPVA  + +++  FLF A+E GNH L Q    G DDE        P        F PR L NL ++DEL++LSP+L  Q ADL  E TPQLY  CG G  SSLR+LRHGL V E+A S  P  P   WTV++H++DEFD+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:    1 MIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 213          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A015IPZ0_RHIIW (Rse1p n=12 Tax=Glomeromycetes TaxID=214506 RepID=A0A015IPZ0_RHIIW)

HSP 1 Score: 212 bits (539), Expect = 5.690e-60
Identity = 114/214 (53.27%), Postives = 141/214 (65.89%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSD-DEP--------------AARFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPE 597
            +IIV+  + + +  FFF+LQSE GD+YKV LDYE D V  +++KYFDTVPVA  L I+R  FLF AAE GNH L  F   G D DEP              +A FTPR L NL+  DELE+L+P++  +  +L  + TPQLY LCG GA S+ RILRHGL + E+A S  P  P   WT K   DDEFD+YI+VSFVNAT+VLSIG TVEEV +
Sbjct:  284 LIIVAGVMHKMKGVFFFLLQSEEGDIYKVTLDYEDDKVNAIKIKYFDTVPVAASLCILRAGFLFVAAEFGNHRLYSFTSLGDDNDEPEWSSDEFMDSDTDISAYFTPRDLQNLERADELESLNPLIDAKVLNLTDDDTPQLYALCGRGAGSTFRILRHGLEISEMAVSELPGNPNAVWTTKLKSDDEFDAYIIVSFVNATLVLSIGETVEEVTD 497          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: UPI0003F0B8FA (LOW QUALITY PROTEIN: splicing factor 3B subunit 3 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B8FA)

HSP 1 Score: 211 bits (537), Expect = 6.250e-60
Identity = 110/213 (51.64%), Postives = 142/213 (66.67%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++K+ L+ + D V  + +KYFDTVPVAN LS+++  FLF AAE GNH L Q    G DDE        P        F PR+L NL ++DE+E+LSP+L  Q ADL  E TPQLY  CG G+ SS+RILRHGL V E+A S  P  P   WTV+K ++DEFD+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:   59 MIFVCSAAHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRMKYFDTVPVANTLSVLKTGFLFLAAEFGNHFLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFAPRTLKNLVLVDEMESLSPILSCQIADLANEDTPQLYSACGRGSRSSIRILRHGLEVSEMAVSELPGNPNAVWTVRKTIEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 271          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A1B6L7D0_9HEMI (MMS1_N domain-containing protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L7D0_9HEMI)

HSP 1 Score: 206 bits (525), Expect = 1.330e-59
Identity = 109/213 (51.17%), Postives = 139/213 (65.26%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDD-EPAAR------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++KV L+ + D V  +++KYFDTVPVA  + +M+  FLF AAE GNH L Q    G DD EP               F PR L NL ++DE+++LSP+L  Q ADL  E TPQLY  CG G  SS+R+LRHGL V E+A S  P  P   WTVKK VDDE+D+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:  285 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLEIDEDMVTEIKLKYFDTVPVATAMCVMKTGFLFVAAEFGNHYLYQIAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLKNLVLVDEMDSLSPILACQVADLANEDTPQLYMACGRGPRSSIRVLRHGLEVSEMAVSELPGNPNAVWTVKKRVDDEYDAYIIVSFVNATLVLSIGETVEEVADS 497          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A2T7NJ16_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NJ16_POMCA)

HSP 1 Score: 210 bits (534), Expect = 2.400e-59
Identity = 106/213 (49.77%), Postives = 143/213 (67.14%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPAA-------------RFTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF++Q+E GD++KV L+ + D V  + +KYFDTVPVA+ + +++  FLF AAE GNH L Q V  G DD+                 F PR+L NL ++DE+++LSP+L  Q ADL  E TPQ+Y LCG G  S+LR+LRHGL V E+A S  P  P   WTVK+H+DDE+D+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:  180 MIFVCSATHKTKSMFFFLVQTEQGDIFKVTLETDEDIVTEIRLKYFDTVPVASSMCVLKSGFLFIAAEFGNHYLYQIVHLGEDDDEVTFSSATPIEEGDTFLFAPRALKNLAMVDEMDSLSPILTTQIADLVNEDTPQIYTLCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRHIDDEYDAYIIVSFVNATLVLSIGETVEEVTDS 392          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: A0A0S7EVK3_9TELE (SF3B3 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7EVK3_9TELE)

HSP 1 Score: 202 bits (513), Expect = 3.090e-59
Identity = 105/213 (49.30%), Postives = 138/213 (64.79%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDE--------PAAR-----FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++KV L+ + + V  + +KYFDT+PVA  + +++  FLF A+E GNH L Q    G DDE        P        F PR L NL ++DE ENLSP++  Q ADL  E TPQLY  CG G  S+LR+LRHGL V E+A S  P  P   WTV++HV+DEFD+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:  230 MIFVCSATHKTKSMFFFLAQTEQGDIFKVTLETDEEMVTEIRLKYFDTIPVATAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDTPQLYVSCGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDS 442          
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Match: T1J553_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J553_STRMM)

HSP 1 Score: 209 bits (531), Expect = 6.960e-59
Identity = 107/213 (50.23%), Postives = 141/213 (66.20%), Query Frame = 1
Query:    1 VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVPVANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPAAR-------------FTPRSLTNLQVIDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEVATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA 600
            +I V  A  + +  FFF+ Q+E GD++K+ L+ + D V  +++KYFDT+PVA  +++++  FLF A+E  NH L Q    G DD+ A               F PRSL NL ++DELE+LSP++  Q ADL  E TPQLY +CG G+ SSLRILRHGL V E+A S  P  P   WTVKK  DDEFD+YI+VSFVNAT+VLSIG TVEEV ++
Sbjct:  285 LIFVCSATHKTKSMFFFLAQTEQGDIFKITLEVDDDMVTEIKLKYFDTIPVATAMNVLKTGFLFVASEFSNHYLYQIAHLGDDDDEAEFTSATPLEEGDTFFFAPRSLRNLVLVDELESLSPIMSCQIADLANEDTPQLYTMCGVGSRSSLRILRHGLEVSEMAVSELPGNPNAVWTVKKKSDDEFDAYIIVSFVNATLVLSIGETVEEVTDS 497          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107599.1612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B6J6Z0_9HEMI3.290e-6251.17MMS1_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A183IFI5_9BILA6.190e-6152.58MMS1_N domain-containing protein n=1 Tax=Soboliphy... [more]
A0A812HUH2_9DINO1.940e-6050.48Sf3b3 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A2I3HKC8_NOMLE2.600e-6049.77Splicing factor 3b subunit 3 n=4 Tax=Simiiformes T... [more]
A0A015IPZ0_RHIIW5.690e-6053.27Rse1p n=12 Tax=Glomeromycetes TaxID=214506 RepID=A... [more]
UPI0003F0B8FA6.250e-6051.64LOW QUALITY PROTEIN: splicing factor 3B subunit 3 ... [more]
A0A1B6L7D0_9HEMI1.330e-5951.17MMS1_N domain-containing protein (Fragment) n=1 Ta... [more]
A0A2T7NJ16_POMCA2.400e-5949.77Uncharacterized protein n=2 Tax=Pomacea canalicula... [more]
A0A0S7EVK3_9TELE3.090e-5949.30SF3B3 n=1 Tax=Poeciliopsis prolifica TaxID=188132 ... [more]
T1J553_STRMM6.960e-5950.23Uncharacterized protein n=1 Tax=Strigamia maritima... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107599contigM-pyrifera_M_contig107599:4..603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score212.6
Seed ortholog evalue1.7e-52
Seed eggNOG ortholog588596.U9V8N9
Preferred nameRSE1
KEGG koko:K12830
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016071,GO:0017069,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030620,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0065003,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1990904
EggNOG free text desc.pre-mRNA-splicing factor RSE1
EggNOG OGs38CUK@33154,3NZIJ@4751,KOG1898@1,KOG1898@2759
Ec32 ortholog descriptionCleavage/polyadenylation specificity factor, A subunit, C-terminal
Ec32 orthologEc-20_000620.1
COG Functional cat.A
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03021,ko03036,ko03041
Exons1
Model size600
Cds size600
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815585.4716363-CDS-M-pyrifera_M_contig107599:3..6031622815585.4716363-CDS-M-pyrifera_M_contig107599:3..603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107599 4..603 +
1692277475.470343-CDS-M-pyrifera_M_contig107599:3..6031692277475.470343-CDS-M-pyrifera_M_contig107599:3..603Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107599 4..603 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107599.1612.1prot_M-pyrifera_M_contig107599.1612.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107599 4..603 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107599.1612.1

>prot_M-pyrifera_M_contig107599.1612.1 ID=prot_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
VIIVSHALFQRRDKFFFMLQSEVGDLYKVDLDYEGDTVQGVEVKYFDTVP
VANCLSIMRPAFLFCAAENGNHLLLQFVKDGSDDEPAARFTPRSLTNLQV
IDELENLSPVLGMQAADLQREATPQLYGLCGTGASSSLRILRHGLSVVEV
ATSTFPATPCNTWTVKKHVDDEFDSYIVVSFVNATMVLSIGATVEEVPEA
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mRNA from alignment at M-pyrifera_M_contig107599:4..603+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107599.1612.1 ID=mRNA_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig107599:4..603+ (Macrocystis pyrifera P11B4 male)
GTCATCATCGTCTCCCACGCTCTCTTCCAGAGGAGAGACAAGTTCTTCTT CATGCTCCAGAGCGAAGTGGGAGACCTCTACAAGGTGGACCTTGACTACG AAGGAGACACCGTCCAGGGCGTCGAGGTGAAGTACTTCGACACCGTGCCA GTCGCCAACTGCCTCAGCATCATGCGACCTGCCTTCCTCTTTTGTGCTGC AGAGAACGGCAACCATCTGCTCTTGCAGTTCGTCAAGGATGGCTCTGACG ACGAGCCTGCTGCTCGCTTCACGCCCCGATCCCTCACCAACCTGCAGGTG ATCGACGAGCTCGAGAACCTGAGTCCCGTACTTGGCATGCAGGCGGCAGA TCTCCAGCGAGAGGCAACACCTCAGTTGTATGGCCTCTGTGGCACCGGTG CCTCGTCCTCTTTGAGAATTCTTCGCCACGGCCTTTCAGTGGTGGAGGTG GCGACCAGCACATTCCCCGCCACTCCTTGCAACACATGGACAGTGAAGAA GCACGTGGATGACGAGTTTGACAGCTATATTGTTGTCTCCTTTGTCAACG CCACAATGGTCCTCTCCATTGGCGCCACTGTAGAGGAAGTGCCTGAGGCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107599:4..603+

>mRNA_M-pyrifera_M_contig107599.1612.1 ID=mRNA_M-pyrifera_M_contig107599.1612.1|Name=mRNA_M-pyrifera_M_contig107599.1612.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig107599:4..603+ (Macrocystis pyrifera P11B4 male)
GTCATCATCGTCTCCCACGCTCTCTTCCAGAGGAGAGACAAGTTCTTCTT
CATGCTCCAGAGCGAAGTGGGAGACCTCTACAAGGTGGACCTTGACTACG
AAGGAGACACCGTCCAGGGCGTCGAGGTGAAGTACTTCGACACCGTGCCA
GTCGCCAACTGCCTCAGCATCATGCGACCTGCCTTCCTCTTTTGTGCTGC
AGAGAACGGCAACCATCTGCTCTTGCAGTTCGTCAAGGATGGCTCTGACG
ACGAGCCTGCTGCTCGCTTCACGCCCCGATCCCTCACCAACCTGCAGGTG
ATCGACGAGCTCGAGAACCTGAGTCCCGTACTTGGCATGCAGGCGGCAGA
TCTCCAGCGAGAGGCAACACCTCAGTTGTATGGCCTCTGTGGCACCGGTG
CCTCGTCCTCTTTGAGAATTCTTCGCCACGGCCTTTCAGTGGTGGAGGTG
GCGACCAGCACATTCCCCGCCACTCCTTGCAACACATGGACAGTGAAGAA
GCACGTGGATGACGAGTTTGACAGCTATATTGTTGTCTCCTTTGTCAACG
CCACAATGGTCCTCTCCATTGGCGCCACTGTAGAGGAAGTGCCTGAGGCT
GTCATCATCGTCTCCCACGCTCTCTTCCAGAGGAGAGACAAGTTCTTCTT
CATGCTCCAGAGCGAAGTGGGAGACCTCTACAAGGTGGACCTTGACTACG
AAGGAGACACCGTCCAGGGCGTCGAGGTGAAGTACTTCGACACCGTGCCA
GTCGCCAACTGCCTCAGCATCATGCGACCTGCCTTCCTCTTTTGTGCTGC
AGAGAACGGCAACCATCTGCTCTTGCAGTTCGTCAAGGATGGCTCTGACG
ACGAGCCTGCTGCTCGCTTCACGCCCCGATCCCTCACCAACCTGCAGGTG
ATCGACGAGCTCGAGAACCTGAGTCCCGTACTTGGCATGCAGGCGGCAGA
TCTCCAGCGAGAGGCAACACCTCAGTTGTATGGCCTCTGTGGCACCGGTG
CCTCGTCCTCTTTGAGAATTCTTCGCCACGGCCTTTCAGTGGTGGAGGTG
GCGACCAGCACATTCCCCGCCACTCCTTGCAACACATGGACAGTGAAGAA
GCACGTGGATGACGAGTTTGACAGCTATATTGTTGTCTCCTTTGTCAACG
CCACAATGGTCCTCTCCATTGGCGCCACTGTAGAGGAAGTGCCTGAGGCT
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