mRNA_M-pyrifera_M_contig10751.1602.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig10751.1602.1 vs. uniprot
Match: D7FXZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI) HSP 1 Score: 271 bits (693), Expect = 5.600e-70 Identity = 237/486 (48.77%), Postives = 288/486 (59.26%), Query Frame = 1 Query: 1 QVLIMDTERIAV-ADGFIEPEETIDLSSGGGGGDACAPPRALSWGYSLRAGGYHLL-VVRADRTAVVAHLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVVKDVANGKRAFTAGCSLLQGAGRFALGTCDGDVELYDWEGGXXXXXX--LTTPQGVAGRPPQLAM-TGEVELNHLSVTQIGTLLAVYYDPAAD--NDFAARLAEFNVSQERTM--PVLLSFEDPDEDTFVSSPSYNAPDSYSFRSHVAFVSLKGEHLIVVSNSMNSSCPGVLTCRTNGEGG----WAPYELDDS--WDFSPPTGAFPRGLVFSECCDTSVPTQSVRQERSFGASPLAFRLTTRGELECYAVVHPLRPEVSTRRDGLP--PILPVVAPVAEXXXXXXXXXXXXXXXXXXXXXXGEVEEPS----SGSGVFGAGSGGSLVFGSGALVDPTAADRKEGGG---TGFGFSGFGVGGASSAGAKPSFGGFSPPPTA 1386 +VL++DT + A P T+ LSS G PPRALSWG G LL VVRADR+A VA + XXXXXXXXX V+DVA G++ FTAGC L QG GR A+GT GD+E+Y + GXXXXXX L + V P +L M + E+NHL TQ+G+LLAVYYDP + N+FAAR+AEF+VS E P L +FEDPD D + PS++ P S FRSHVA +L+GEH++VVS++ P VLT +T G W+ YEL D WD G F RGL FSECCDT VP Q+ + +GA PLAF L G+L+C A+VHP +PEVS RR P LP A V EXXXXXXXXXXXXXXXXXXXXXX + S VFG+G GSLVFGSG+LVDPT+A++K GG FG+ GFG A AG+ FG F PP A Sbjct: 181 KVLVLDTASLVNGAAAAAAPVATVALSSPDAGDSGDLPPRALSWGRKSSGDGDDLLLVVRADRSAAVARISXXXXXXXXXXSDRCS-------------------VEDVAGGQKVFTAGCWLGQGRGRLAMGTRTGDLEVYVYGEGXXXXXXXGLRDCEAVVCCPSELCMGDADAEVNHLVTTQMGSLLAVYYDPTTEENNEFAARMAEFDVSAEDLTGGPTLKAFEDPDLDGKIF-PSFDTPKSVKFRSHVALATLEGEHVMVVSHNSLDGTPSVLTTKTGAVAGDNGRWSSYELPDGFDWDLG---GVFSRGLCFSECCDTPVPAQTKKGATDYGAGPLAFMLMANGDLQCAAMVHPQQPEVSLRRKTAPRAQALPARAVVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKAFGWGGFGAKPAFGAGSSSPFGSFMSPPAA 643
BLAST of mRNA_M-pyrifera_M_contig10751.1602.1 vs. uniprot
Match: A0A6H5JBC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC0_9PHAE) HSP 1 Score: 266 bits (679), Expect = 3.230e-68 Identity = 229/486 (47.12%), Postives = 275/486 (56.58%), Query Frame = 1 Query: 61 ETIDLSSGGGGGDACAP------------------PRALSWGYSLRAGGYH--LLVVRADRTAVVAHLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVVKDVANGKRAFTAGCSLLQGAGRFALGTCDGDVELYDW-EGGXXXXXX----LTTPQGVAGRPPQLAM-TGEVELNHLSVTQIGTLLAVYYDPAAD--NDFAARLAEFNVSQERTM--PVLLSFEDPDEDTFVSSPSYNAPDSYSFRSHVAFVSLKGEHLIVVSNSMNSSCPGVLTCRTNGEGG----WAPYELDDS--WDFSPPTGAFPRGLVFSECCDTSVPTQSVRQERSFGASPLAFRLTTRGELECYAVVHPLRPEVSTRRDGLP--PILPVVAPVAEXXXXXXXXXXXXXXXXXXXXXXGEVEEPS--SGSGVFGAGSGGSLVFGSGALVDPTAADRKEGGG---TGFGFSG-FGVGGASSAGAKPSFGGFSPPPTA 1386 +T L +GGG G AP PRALSWG + +G LLVVRADRTA VAH+ V+DVA G+ FTAGC L QG GR A+GT GD+E+Y + +GGXXXXXX L + V P +L M + E+NHL TQ G+LLAVYYDP + N+FAAR+AEF+VS E P L +FEDPD D + PS++ P S FRSHVA +L+GEH++VVS++ P VLT +T GG W+ YEL D WD G F RGL FSECCDT VP QS + +GA PLAF L G+L+C A+VHP +PEVS RR P LP A V EXXXXXXXXXXXXXXXXXXXXXX + S VFG+G GSLVFGSG+LVDPT+A++K GG FGF G FG A G+ FG F PP A Sbjct: 12 DTASLVNGGGSGATAAPVXXXXXXXXXXXXXXDLPPRALSWGRTKSSGDGEDLLLVVRADRTAAVAHISGGGGGDGPGRCS----------------------VEDVAEGQNVFTAGCWLGQGRGRLAMGTRTGDLEVYVYGDGGXXXXXXXXXGLRDCEAVVCCPSELGMGDADAEVNHLVTTQTGSLLAVYYDPTTEENNEFAARMAEFDVSAEDLTGGPTLKAFEDPDLDGKIF-PSFDTPKSVKFRSHVALATLEGEHVMVVSHNSLDGTPAVLTTKTRAVGGDNGRWSSYELPDGFDWDLG---GDFSRGLCFSECCDTPVPAQSKKGATDYGAGPLAFMLMANGDLQCAAMVHPQQPEVSLRRKTAPRAQALPARAAVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKSPVFGSGGAGSLVFGSGSLVDPTSAEKKGAGGGAAKAFGFGGGFGAKPAFGVGSSSPFGSFMSPPAA 471 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10751.1602.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig10751.1602.1 >prot_M-pyrifera_M_contig10751.1602.1 ID=prot_M-pyrifera_M_contig10751.1602.1|Name=mRNA_M-pyrifera_M_contig10751.1602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1377bp MDTERIAVADGFIEPEETIDLSSGGGGGDACAPPRALSWGYSLRAGGYHLback to top mRNA from alignment at M-pyrifera_M_contig10751:127..10146+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig10751.1602.1 ID=mRNA_M-pyrifera_M_contig10751.1602.1|Name=mRNA_M-pyrifera_M_contig10751.1602.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10020bp|location=Sequence derived from alignment at M-pyrifera_M_contig10751:127..10146+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig10751:127..10146+ >mRNA_M-pyrifera_M_contig10751.1602.1 ID=mRNA_M-pyrifera_M_contig10751.1602.1|Name=mRNA_M-pyrifera_M_contig10751.1602.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=8262bp|location=Sequence derived from alignment at M-pyrifera_M_contig10751:127..10146+ (Macrocystis pyrifera P11B4 male)back to top |