mRNA_M-pyrifera_M_contig107505.1601.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A3N1D1K9_9ACTN (2-hydroxy-6-oxonona-2,4-dienedioate hydrolase n=1 Tax=Actinocorallia herbida TaxID=58109 RepID=A0A3N1D1K9_9ACTN) HSP 1 Score: 160 bits (405), Expect = 1.110e-46 Identity = 77/117 (65.81%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIM +DK RFA+ +LC R+EAA A P+HL N++AGLPHG PVP++ E L I AP+L +HGRDDRVV +EH+L LV+++P+SR+VL+NRCGHWAMIEHA EFNRLVIDFV N Sbjct: 164 LVEIMVYDKARFATPELCAARSEAALARPDHLANYVAGLPHGAPVPTWVRPEDLPGIKAPSLFVHGRDDRVVSFEHSLALVANVPDSRLVLLNRCGHWAMIEHAEEFNRLVIDFVRN 280
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A372GFU4_9ACTN (Alpha/beta fold hydrolase n=2 Tax=Actinomadura TaxID=1988 RepID=A0A372GFU4_9ACTN) HSP 1 Score: 160 bits (405), Expect = 1.240e-46 Identity = 77/117 (65.81%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIMCFDK RFA+ +LC+ R++AA A PEHL+N++ GLP G P+P +A E L I P LL+HGRDDRVV +E++L L+S IP+SR+V++NRCGHWAMIEHAAEFNRLVIDFV N Sbjct: 164 LVEIMCFDKARFATPELCQARSDAALARPEHLRNYVEGLPKGAPLPVWADLESLPGIEVPTLLVHGRDDRVVPFENSLFLLSAIPDSRLVVLNRCGHWAMIEHAAEFNRLVIDFVAN 280
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: UPI00197ABDB0 (alpha/beta fold hydrolase n=1 Tax=Actinomadura soli TaxID=2508997 RepID=UPI00197ABDB0) HSP 1 Score: 154 bits (388), Expect = 4.130e-46 Identity = 74/117 (63.25%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIMCFDK RFA+ +LCR R++AA A PEHL+N++ GLP G P+P + E L I P LL+HGRDDRVV +E +L+L++ IP+SR+VL+NRCGHWAMIEHA EFNRLV DF+ N Sbjct: 4 LVEIMCFDKARFATPELCRARSDAALARPEHLRNYVEGLPKGAPLPIWVKPELLPTIQVPTLLIHGRDDRVVPFESSLYLLASIPDSRLVLLNRCGHWAMIEHADEFNRLVTDFLRN 120
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A0H5NH52_NOCFR (2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase n=3 Tax=Nocardia TaxID=1817 RepID=A0A0H5NH52_NOCFR) HSP 1 Score: 159 bits (401), Expect = 4.690e-46 Identity = 75/118 (63.56%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTNN 351 LVE+M FDK RFA+ +L R R++AA A PEHL+N++AGLP G P+P + +L +I+AP LL+HG+DDRVV +E+TL L++HIP+SR VL+NRCGHWAMIEHAAEFNRLV DFV+ N Sbjct: 166 LVEVMTFDKARFATPELVRARSDAALARPEHLRNYVAGLPAGAPIPHWVDRSKLADIAAPTLLIHGKDDRVVSYENTLFLLAHIPDSRAVLLNRCGHWAMIEHAAEFNRLVADFVSGN 283
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A401YEJ7_9ACTN (Putative hydrolase, alpha/beta fold protein n=1 Tax=Embleya hyalina TaxID=516124 RepID=A0A401YEJ7_9ACTN) HSP 1 Score: 158 bits (400), Expect = 6.290e-46 Identity = 74/117 (63.25%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIMCFDK RFA+ +LCR+R+EAA A PEHL+N++ GLP G P+P + L I+ P L++HGRDDRVV +E +LHL++++P+SR+VL+NRCGHWAMIEHA EFNRLV DFV N Sbjct: 164 LVEIMCFDKERFATPELCRMRSEAALARPEHLRNYVDGLPQGAPLPKWVDPRLLPAITTPTLIIHGRDDRVVSYEVSLHLLANVPDSRLVLLNRCGHWAMIEHADEFNRLVTDFVRN 280
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: UPI001AE87F31 (alpha/beta fold hydrolase n=1 Tax=Pseudonocardia parietis TaxID=570936 RepID=UPI001AE87F31) HSP 1 Score: 158 bits (400), Expect = 6.630e-46 Identity = 76/117 (64.96%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 LVEIMCFDKRFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTNN 351 LVEIM F FA+D+L RLRA+ A+A P+HL+NFLAG+ G PV S A+ EQ+ I+AP LL+HGRDDRVVH+EH+L LVS IP+SR+VL NRCGHW IEHA EFNR+V +FV NN Sbjct: 167 LVEIMTFSPEFATDELARLRADGANARPDHLENFLAGMAGGGPVRSGATPEQVAGITAPTLLIHGRDDRVVHYEHSLRLVSTIPDSRLVLFNRCGHWTQIEHADEFNRIVAEFVRNN 283
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A429GBZ8_9ACTN (Alpha/beta hydrolase n=2 Tax=Actinomadura TaxID=1988 RepID=A0A429GBZ8_9ACTN) HSP 1 Score: 156 bits (394), Expect = 5.740e-45 Identity = 76/117 (64.96%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIMCFD RFA+ +LCR R+ AA A PEHL+N++ GLP G P+P +A E L I+ P LL+HGRDDRVV +E++LHL+++IP+SR+VL+NRCGHWAMIEHA EFNRLV DFV N Sbjct: 164 LVEIMCFDTARFATPELCRARSAAALARPEHLRNYVDGLPAGAPLPIWAKPELLPGIAVPTLLIHGRDDRVVPFENSLHLLANIPDSRLVLLNRCGHWAMIEHADEFNRLVTDFVRN 280
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A1I5EIP4_9PSEU (2-hydroxy-6-oxonona-2,4-dienedioate hydrolase n=1 Tax=Pseudonocardia ammonioxydans TaxID=260086 RepID=A0A1I5EIP4_9PSEU) HSP 1 Score: 155 bits (393), Expect = 7.500e-45 Identity = 75/117 (64.10%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 1 LVEIMCFDKRFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTNN 351 LVEIM F FA+D+L +LRA+ A+A P+HL NFLAG G PV + A+ EQ+ I+AP LL+HGRDDRVVH+EH+L LVS IP+SR+VL+NRCGHW IEHA EFNRLV DFV +N Sbjct: 167 LVEIMTFSPEFATDELAQLRADGANARPDHLANFLAGAAGGGPVRTAATPEQVASIAAPTLLIHGRDDRVVHYEHSLRLVSLIPDSRLVLLNRCGHWTQIEHADEFNRLVADFVRSN 283
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A3A8F9I7_9GAMM (Alpha/beta fold hydrolase n=1 Tax=Acinetobacter sp. WCHAc060007 TaxID=2419605 RepID=A0A3A8F9I7_9GAMM) HSP 1 Score: 154 bits (390), Expect = 1.960e-44 Identity = 71/115 (61.74%), Postives = 93/115 (80.87%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFV 342 LVEIMCFDK RFA+ +LC+ R++AA A PEHLKN++AGLPHG P+P + +L +I P++ +HGRDDRVV +E +L L +++PNSR+VLIN+CGHWAMIEHA EFN LVI F+ Sbjct: 164 LVEIMCFDKARFATPELCKARSDAALARPEHLKNYVAGLPHGAPLPKWVDVTKLRDIKVPSMFIHGRDDRVVSYETSLLLTANVPNSRLVLINQCGHWAMIEHADEFNSLVIQFL 278
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Match: A0A1V1W007_9ACTN (Alpha/beta hydrolase fold protein n=1 Tax=Nocardioides sp. PD653 TaxID=393303 RepID=A0A1V1W007_9ACTN) HSP 1 Score: 154 bits (390), Expect = 2.410e-44 Identity = 73/117 (62.39%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 LVEIMCFDK-RFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMEISAPALLLHGRDDRVVHWEHTLHLVSHIPNSRMVLINRCGHWAMIEHAAEFNRLVIDFVTN 348 LVEIM FDK RFA+ +L + R+EAA A P+HL+N++AGL HG P+P E++ +I+ P LL+HG+DDRV+H+E TL L+++IPNSR VL+NRCGHWAMIEHAAEFNRLVIDF+ + Sbjct: 171 LVEIMTFDKQRFATPELTKARSEAALARPDHLRNYVAGLAHGAPIPIRVDREKIADITVPTLLIHGKDDRVLHYEITLWLLANIPNSRAVLLNRCGHWAMIEHAAEFNRLVIDFLAH 287 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107505.1601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107505.1601.1 >prot_M-pyrifera_M_contig107505.1601.1 ID=prot_M-pyrifera_M_contig107505.1601.1|Name=mRNA_M-pyrifera_M_contig107505.1601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp MCFDKRFASDDLCRLRAEAASAEPEHLKNFLAGLPHGWPVPSFASFEQLMback to top mRNA from alignment at M-pyrifera_M_contig107505:267..620- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107505.1601.1 ID=mRNA_M-pyrifera_M_contig107505.1601.1|Name=mRNA_M-pyrifera_M_contig107505.1601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig107505:267..620- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107505:267..620- >mRNA_M-pyrifera_M_contig107505.1601.1 ID=mRNA_M-pyrifera_M_contig107505.1601.1|Name=mRNA_M-pyrifera_M_contig107505.1601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig107505:267..620- (Macrocystis pyrifera P11B4 male)back to top |