mRNA_M-pyrifera_M_contig107504.1600.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: A0A5C6CEP7_9BACT (Uncharacterized protein n=1 Tax=Novipirellula galeiformis TaxID=2528004 RepID=A0A5C6CEP7_9BACT) HSP 1 Score: 119 bits (299), Expect = 1.590e-28 Identity = 73/204 (35.78%), Postives = 105/204 (51.47%), Query Frame = 1 Query: 1 RFLRRQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIAEAERVQRLFIVPIEARVGLTRFTQAFVNVPFGWSSSEVAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKFADDLKVDPGNLLFYRFGMGFAVNPHV 612 +FLR T LL+P + QFD Y +++F + G +A + V+R VP+ R GL TQ F+N P GW ++ A D + GGIGD + G T+ L N ++ T + +APT + L G G G W + L IQN DP++ FYGGG+ Y FE +F+ V+ G+ + YR G+GFA N V Sbjct: 143 QFLRSVTPLLKPGQMQFDWGAVYSVQETNFPVLV--GGGSILARGDVVRRSLFVPLAMRYGLNERTQLFINAPVGWYDTQFATVAGDSSDSEGGIGDTTFGFTRLLSQNNRAGRSLVGTVSATAPTGNPL--NPLVFNGGGTGNGVWRLGGDLLVIQNLDPVILFYGGGYAYNFENEFSG-FDVELGHQISYRMGLGFAANERV 341
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: UPI001CCD1B2D (transporter n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCD1B2D) HSP 1 Score: 113 bits (282), Expect = 3.650e-26 Identity = 79/209 (37.80%), Postives = 105/209 (50.24%), Query Frame = 1 Query: 1 RFLRRQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIAEAERVQRLFIVPIEARVGLTRFTQAFVNVPFGWSSSEVAFNGE-DRTKDRGGIGDVSAGITKQLIVG-NEFYPDVLATTAFSAPTSDASFTAALTTPGSN---LGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKFADDLKVDPGNLLFYRFGMGFAVNPHV 612 +FLR ++LL+P +WQFD YV D + + SGV AE +R RL VP R G + Q ++P GWS E + G D + GGIGD+ G+ + E PDV+ S PT D F T G N L W + + +Q YDPIV FYG G+QY+FE +F+ + V G Y FG+GFAVN V Sbjct: 128 QFLRTASVLLKPGQWQFDYGLVYVKDNFELP-ISLFPSGVAPAETKR--RLLQVPFAVRYGWNKDVQLSASLPVGWSQIEFSSPGIFDEYNNNGGIGDLQLGVNYHWLKSCGEHSPDVILNFGLSVPTGDGVFA----TTGVNQATLANAVWAPSIQVLCVQRYDPIVLFYGVGYQYQFEREFSG-VDVQYGQQFSYNFGVGFAVNDTV 328
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: A0A3M1MFC8_9BACT (Transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1MFC8_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 1.000e-20 Identity = 70/205 (34.15%), Postives = 99/205 (48.29%), Query Frame = 1 Query: 1 RFLRRQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIAEAERVQRLFIVPIEARVGLTRFTQAFVNVPFGWSSSEVAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKF-ADDLKVDPGNLLFYRFGMGFAVNPHV 612 +FLR T LL + QFD Y + DF + G + A +R P+ R G TQ FVN+P GWS SEV+ D +D GIGD++ G+TK + T APT DA + + G LG G W L +Q+ DP+V FYG G+ Y E+ + +D+++ G+ Y G+GFA N +V Sbjct: 111 QFLRSLTPLLRRGQSQFDYGLVYTLQEFDFPTLV----GSNLVRANSRRRALFTPLAWRYGWNDCTQLFVNLPVGWSHSEVSTPFSDNRRDEFGIGDLTFGVTKLWRQNRSTGSSTIVTFRTVAPTGDAVNPLVIDSVG--LGSGAWRFGGDLLRVQSLDPVVLFYGIGYVYSVEDSYQGNDIQL--GHQANYNLGVGFAANEYV 307
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: A0A3B8ZE56_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B8ZE56_9PLAN) HSP 1 Score: 94.4 bits (233), Expect = 5.280e-19 Identity = 67/207 (32.37%), Postives = 100/207 (48.31%), Query Frame = 1 Query: 4 FLRRQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGV---TIAEAERVQ-RLFIVPIEARVGLTRFTQAFVNVPFGWSSSEVAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKFADDLKVDPGNLLFYRFGMGFAVNPHV 612 FLR QT LL+P +WQFD Y ++DF + V + E V+ R + R G+T Q + GW +E A R D GIGD++ G+ L E P V+ + +APT + LT G+ GLG WT + + ++ YDP+V F+G G+++ E+ F + +V G+ + Y G GF VN V Sbjct: 219 FLRAQTPLLKPRQWQFDYGLTYSILETDFPVLLPPGPVVGPDPVLTNELVKFRTADALLGFRYGITERLQWAGSTTVGWQGTEFANGFFHRKTDASGIGDIATGLNYLLFAETECSPSVITSVNMTAPTGNPRSPRILTDSGT--GLGAWTFASDVLMVKAYDPLVLFWGAGYRWFLEDTFHGE-RVKIGDSIQYNLGTGFGVNERV 422
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: UPI000C289C5A (transporter n=1 Tax=Marinobacter salexigens TaxID=1925763 RepID=UPI000C289C5A) HSP 1 Score: 67.4 bits (163), Expect = 9.480e-10 Identity = 65/225 (28.89%), Postives = 95/225 (42.22%), Query Frame = 1 Query: 22 ILLEPCEWQFDVSPQYVTDKSDFVGVQD----DASGVTIAEAERVQR-LFIVPIEARVGLTRFTQAFVNVPFGWSSSEV----AFNGED----RTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTT----PGSNLGL---------GFWTMTTGLTFIQNYDPIVFFYGGGFQYRF----EEKFADDLKVDPGNLLFYRFGMGFAVNP 606 I+ P + + S Y S V ++ A + + VQR F+ I + G T +A V VP+ S + F+G R G+GDV QL G E +P ++ PT + + TT G+ +G+ GFW+ G +FI DP V F G Y F E+ FA+ VDPG+++ + FGMGFA NP Sbjct: 55 IVTRPGRFTIEPSLSYAHSTSTLVAIEGYTVIPALVIGLINISEVQRDTFVGAISLKYGFTSRWEAAVRVPYLSISENIRERDVFSGSPVDNLRESSGDGLGDVELSTRYQLNDGVEGWPYIIGLFRVKGPTGKSPYDVEQTTLFADDGTPIGVTLKERPTGSGFWSFEPGFSFIYPSDPAVLF--GNLSYVFTLKEEQGFANGGTVDPGDVIRFGFGMGFAFNP 277
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: UPI00131A8396 (hypothetical protein n=1 Tax=Granulicella sp. L60 TaxID=1641866 RepID=UPI00131A8396) HSP 1 Score: 63.5 bits (153), Expect = 2.350e-8 Identity = 64/222 (28.83%), Postives = 96/222 (43.24%), Query Frame = 1 Query: 13 RQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIA----EAERVQRLFIVP-IEARVGLTRFTQAFVNVPFGWSSSE-VAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKFADDLKVD----------------PGNLLFYRFGMGFAVNPHV 612 R +LL + D + Y + SD V V A + +ERV+ +++P + AR+GL Q VP+G+ V N + G+GD+SAGI++QL PD+LA F + T + L + LG GF + LT ++ DP+VFF G Y FA D V PG+ + ++ G A+NP V Sbjct: 118 RGGLLLPSGTLEIDNTTSYFSASSDHVTVNGFALLPVLVVGDIASERVREDYLLPSLTARLGLPHKFQGEFTVPYGYELIRTVDANNVQTSSSSFGLGDISAGISRQLTTERGKKPDILANVRFKSTTGKDPYN--LQSSEVALGTGFNALQGNLTLAKSSDPVVFF--GNLSYT--ANFAGDHTVSANDPNNPAATTVGHFKPGDAMGFQIGSILALNPEV 333
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: UPI0016697694 (transporter n=1 Tax=Edaphobacter dinghuensis TaxID=1560005 RepID=UPI0016697694) HSP 1 Score: 63.2 bits (152), Expect = 3.220e-8 Identity = 50/167 (29.94%), Postives = 84/167 (50.30%), Query Frame = 1 Query: 13 RQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIA----EAERVQRLFIVP-IEARVGLTRFTQAFVNVPFGWSSSE-VAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFF 495 R +LL P + D + Y + SD V V A + ++RV+ ++P R+GL + Q VP+G+ + V G + + + G+GD+ AG+++QL + PD+LA F + T S+ L + +NLG GF+ + LT ++ DP+VFF Sbjct: 131 RGGLLLPPGTLEIDNTTSYFSASSDHVTVDGFALLPILVVGDITSQRVREDILLPTFTTRLGLPKRFQMDFTVPYGYILNRTVDALGNETSASQFGLGDIQAGVSRQLTFEHGHTPDLLANIRFKSVTGTNSYD--LASSQTNLGSGFYAVQGNLTAAKSSDPVVFF 295
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: UPI001407391C (transporter n=1 Tax=Marinobacter caseinilyticus TaxID=2692195 RepID=UPI001407391C) HSP 1 Score: 62.8 bits (151), Expect = 3.750e-8 Identity = 63/224 (28.12%), Postives = 97/224 (43.30%), Query Frame = 1 Query: 22 ILLEPCEWQFDVSPQYVTDKSDFVGVQD----DASGVTIAEAERVQR-LFIVPIEARVGLTRFTQAFVNVPFGWSSSEV----AFNGED----RTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTT----PGSNLGL---------GFWTMTTGLTFIQNYDPIVFFYGGGFQY----RFEEKFADDLKVDPGNLLFYRFGMGFAVN 603 I+ EP + + S + S V ++ A V + VQR +F+ + + G T +A V +P+ ++ AF G R G+GD+ A I Q G + +P + APT + F T G+ +G+ GFW+ GL+FI DP V F G Y + +E FA+ V+PGN++ + FGMGFA N Sbjct: 50 IVTEPGRFIIEPSFSHAHSNSTLVAIEGYTVIPALLVGLINISEVQRDIFVGALSLKYGFTSRFEASVRIPYLSVHEDLRERQAFQGTPVDTLRESSGEGLGDIEASIRYQFNDGLDGWPYTIGNFRVKAPTGEGPFDVEQRTLEDSQGNPIGVAFAERPTGSGFWSFEPGLSFIFPSDPAVLF--GNISYVWTLKQDEGFANGGTVNPGNIVRFGFGMGFAFN 271
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: N6VZV6_9GAMM (Transporter n=2 Tax=Marinobacter TaxID=2742 RepID=N6VZV6_9GAMM) HSP 1 Score: 62.4 bits (150), Expect = 5.130e-8 Identity = 61/222 (27.48%), Postives = 98/222 (44.14%), Query Frame = 1 Query: 22 ILLEPCEWQFDVSPQYVTDKSDFVGVQD----DASGVTIAEAERVQR-LFIVPIEARVGLTRFTQAFVNVPFGWSSSEV----AFNG---EDRTKDRG-GIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTA----ALTTPGSNLGL---------GFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEK--FADDLKVDPGNLLFYRFGMGFAVN 603 I+ P + + + Y S V ++ A V + VQR +F+ + + G+T + V VP+ ++ AF G + T+ G G+GDV A I Q G +P +L T APT + + + + G+ +G+ G+W + GL+FI DP V F + Y EE + +DPGN++ + FGMGFA N Sbjct: 52 IVTRPGRFVIEPAFSYANSNSTVVAIEGYTVVPALLVGLINISEVQRDIFVGALTMKYGITSRLETTVRVPYLDIHEDLRERQAFQGTPVDTLTESSGEGLGDVEATIRYQFNDGLAGWPYILGTLRVKAPTGEGPYDVDRRILVDSEGNPIGVAFAERPTGAGYWGVEPGLSFIYPSDPAVLFGNVSYTYTIEEDEGIENGGTIDPGNIVRFGFGMGFAFN 273
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Match: A0A7W8J6Q2_9BACT (Uncharacterized protein n=3 Tax=Edaphobacter lichenicola TaxID=2051959 RepID=A0A7W8J6Q2_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 5.910e-8 Identity = 61/220 (27.73%), Postives = 98/220 (44.55%), Query Frame = 1 Query: 13 RQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIA----EAERVQRLFIVP-IEARVGLTRFTQAFVNVPFGWSSSE-VAFNGEDRTKDRGGIGDVSAGITKQLIVGNEFYPDVLATTAFSAPTSDASFTAALTTPGSNLGLGFWTMTTGLTFIQNYDPIVFFYGGGFQYRFEEKFADDLKVD--------------PGNLLFYRFGMGFAVNPHV 612 R +LL + D + Y + SD V V A + +ER++ +++P AR+GL Q V +P+G+ V N + G+GD+SAGI++QL + PD+LA+ F + T F L + LG GF ++ LT ++ DP+VFF G Y K + + PG+ + ++ G A+NP V Sbjct: 128 RGGLLLPSGTLEVDNTTSYFSASSDHVTVNGFALLPVLVVGDIASERIREDYLLPNFTARLGLPHKLQGDVTIPYGYELIRTVDANNVQTSSSSFGLGDISAGISRQLTSEHGKIPDMLASVRFKSTTGKDPFN--LQSSQIALGTGFNSIQGNLTMAKSSDPVVFF--GNLSYTANLKGDHTVSANDPNNPAATMVGHFNPGDAVGFQIGSILALNPEV 343 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107504.1600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107504.1600.1 >prot_M-pyrifera_M_contig107504.1600.1 ID=prot_M-pyrifera_M_contig107504.1600.1|Name=mRNA_M-pyrifera_M_contig107504.1600.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=204bp RFLRRQTILLEPCEWQFDVSPQYVTDKSDFVGVQDDASGVTIAEAERVQRback to top mRNA from alignment at M-pyrifera_M_contig107504:2..613- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107504.1600.1 ID=mRNA_M-pyrifera_M_contig107504.1600.1|Name=mRNA_M-pyrifera_M_contig107504.1600.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig107504:2..613- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107504:2..613- >mRNA_M-pyrifera_M_contig107504.1600.1 ID=mRNA_M-pyrifera_M_contig107504.1600.1|Name=mRNA_M-pyrifera_M_contig107504.1600.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1224bp|location=Sequence derived from alignment at M-pyrifera_M_contig107504:2..613- (Macrocystis pyrifera P11B4 male)back to top |