mRNA_M-pyrifera_M_contig1075.1596.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: D8LU36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU36_ECTSI) HSP 1 Score: 177 bits (449), Expect = 1.870e-54 Identity = 77/104 (74.04%), Postives = 89/104 (85.58%), Query Frame = 1 Query: 13 EHLEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKHRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKALL 324 EHL+WM DG+ELW+ + L PTILTGLPMG WAEPQKR WC RELGE VPVITCMSR+KH HC G++LIDDR SL+A WQRAGGVFIHHT+ TSSL++LKA+L Sbjct: 83 EHLDWMPDGRELWDGVAHLQPTILTGLPMGNWAEPQKRNWCKRELGEHVPVITCMSRDKHTHCRPGNILIDDRESLKAAWQRAGGVFIHHTAATSSLEKLKAIL 186
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A7S4GJQ1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GJQ1_9EUGL) HSP 1 Score: 142 bits (359), Expect = 1.240e-40 Identity = 62/103 (60.19%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 13 EHLEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKHRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 + LEW DGQ LW +I LHP ILTGLP G WA PQKRKWCARELG VITC + K ++C +GS+LIDD L LQ W++AGG+FIHHT+T +L++L+AL Sbjct: 82 DQLEWTEDGQRLWTAIRHLHPVILTGLPQGTWAAPQKRKWCARELGCATKVITCKALQKCKYCRTGSLLIDDNLDLQQAWEKAGGIFIHHTTTARTLRKLQAL 184
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A7S3XQ39_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ39_HETAK) HSP 1 Score: 140 bits (354), Expect = 2.640e-39 Identity = 63/101 (62.38%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKHRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 L WM DG+ELW+ I PTILTGLPMG+WAE QKR WCARELG VPV TC+SR+K R G+VL+DDR SLQ W AGGVFIHH ST+ ++ +L L Sbjct: 144 LSWMPDGKELWDRIQSQRPTILTGLPMGRWAEAQKRAWCARELGAGVPVDTCLSRDKWRRARPGAVLVDDRFSLQEKWVEAGGVFIHHQSTSQTIDQLTDL 244
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A835Z4N0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N0_9STRA) HSP 1 Score: 136 bits (342), Expect = 1.480e-37 Identity = 61/105 (58.10%), Postives = 78/105 (74.29%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGE--DVPVITCMSRNKHRHC-TSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKALL 324 L WM DG++LW I P ILTGLP+G+WA PQKR+WC RELG+ DVPVITCMSR+KH +C GS+LIDDR++ + W+ AGGVF+ HTS S+ +L+ LL Sbjct: 30 LPWMKDGKQLWEFIRGYKPAILTGLPLGQWAAPQKRRWCQRELGKPSDVPVITCMSRDKHTYCRVPGSILIDDRITAKEPWEAAGGVFVFHTSAQQSIADLQKLL 134
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: V5WIQ5_9SPIO (Uncharacterized protein n=2 Tax=Salinispira pacifica TaxID=1307761 RepID=V5WIQ5_9SPIO) HSP 1 Score: 132 bits (331), Expect = 3.140e-37 Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNK-----HRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQEL 312 L WM DG++LW+ + ++P ILTGLPMG WAE QKR WCARELGEDV VITCMSR K R T VLIDDRL L+ W+ GG+FIHHT SL++L Sbjct: 47 LHWMPDGRQLWDELKHMNPVILTGLPMGNWAEAQKRSWCARELGEDVEVITCMSREKAKKARERAGTRIPVLIDDRLRLKEAWEEMGGIFIHHTDAVKSLRQL 149
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: H9UJ11_SPIAZ (Uncharacterized protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) TaxID=889378 RepID=H9UJ11_SPIAZ) HSP 1 Score: 132 bits (331), Expect = 3.860e-37 Identity = 61/107 (57.01%), Postives = 72/107 (67.29%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKH------RHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 L W DG +LW L PTILTGLP G WAEPQKR+WCARELG VPVITCMSR+KH R ++L+DDR L W+ AGGVFIHHTS +S+++L L Sbjct: 51 LHWTPDGADLWEFARRLSPTILTGLPRGSWAEPQKREWCARELGSTVPVITCMSRDKHLQAEQARQVGMTAILVDDRQRLAEAWEAAGGVFIHHTSAAASIEQLSGL 157
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A660SQU3_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660SQU3_9SPIR) HSP 1 Score: 127 bits (319), Expect = 3.410e-35 Identity = 60/113 (53.10%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 13 EHLEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNK----------HRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 + L WM DG++LW D P ILTGLPMGKWAEPQKR WC RELG D+PVIT MSR K +R +LIDDRL ++ W+ AGG+FI H S S++ELK L Sbjct: 54 DRLGWMPDGRDLWQVAKDFQPVILTGLPMGKWAEPQKRSWCERELGPDIPVITGMSRRKAELALTWLEENRMPDKTPILIDDRLKIKEPWEAAGGIFILHLSAAGSIEELKGL 166
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A7Y3JH09_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetales bacterium TaxID=2026792 RepID=A0A7Y3JH09_9SPIR) HSP 1 Score: 125 bits (315), Expect = 9.460e-35 Identity = 59/107 (55.14%), Postives = 71/107 (66.36%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKHRHCT------SGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 L WMSDG+ELW PTILTGLP G+WAEPQKR WC RELG DVPV+TCMSR K + + VL+DDRL+ Q+ W GG+F+ H S SL++LK L Sbjct: 48 LAWMSDGKELWEFARRFAPTILTGLPRGQWAEPQKRSWCLRELGPDVPVLTCMSREKGKAASMVLAPDETPVLVDDRLNAQSGWLDIGGIFVLHVSAQDSLRQLKEL 154
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A1G3P6H1_9SPIR (Uncharacterized protein n=2 Tax=Spirochaetes TaxID=203691 RepID=A0A1G3P6H1_9SPIR) HSP 1 Score: 122 bits (306), Expect = 2.260e-33 Identity = 55/109 (50.46%), Postives = 73/109 (66.97%), Query Frame = 1 Query: 13 EHLEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNKHRHCTSGS------VLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 E L WMSDG+ LW+ + P I+TGLP+G WAEPQK+ WC RELG+DV VI CM+R K + + VL+DDR+ ++ W+ GGVF+ HTS SS+ +LKAL Sbjct: 48 EKLHWMSDGKLLWDFCKNYEPIIITGLPLGSWAEPQKKAWCHRELGKDVEVIACMTREKPQKAWEVTPEDQIAVLVDDRIKIKEQWEAMGGVFVFHTSAESSISQLKAL 156
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Match: A0A1W9N866_9SPIO (Uncharacterized protein n=1 Tax=Spirochaeta sp. LUC14_002_19_P3 TaxID=1940821 RepID=A0A1W9N866_9SPIO) HSP 1 Score: 121 bits (303), Expect = 8.300e-33 Identity = 59/111 (53.15%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 19 LEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGEDVPVITCMSRNK----------HRHCTSGSVLIDDRLSLQADWQRAGGVFIHHTSTTSSLQELKAL 321 L WMSDG+ELW ++ + P ILTGLPMG+WAE QKR WCARELG +PVIT +SR K H VL+DDRL LQ W+ GG FI+H +T SSL L+ L Sbjct: 53 LPWMSDGRELWEAVRNFSPAILTGLPMGQWAEGQKRSWCARELGFSIPVITGLSRKKAELAYSWLENHGITNKIPVLVDDRLKLQESWESYGGTFIYHLNTQSSLVGLREL 163 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1075.1596.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1075.1596.1 >prot_M-pyrifera_M_contig1075.1596.1 ID=prot_M-pyrifera_M_contig1075.1596.1|Name=mRNA_M-pyrifera_M_contig1075.1596.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp MSQDEHLEWMSDGQELWNSIVDLHPTILTGLPMGKWAEPQKRKWCARELGback to top mRNA from alignment at M-pyrifera_M_contig1075:11586..12447- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1075.1596.1 ID=mRNA_M-pyrifera_M_contig1075.1596.1|Name=mRNA_M-pyrifera_M_contig1075.1596.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=862bp|location=Sequence derived from alignment at M-pyrifera_M_contig1075:11586..12447- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1075:11586..12447- >mRNA_M-pyrifera_M_contig1075.1596.1 ID=mRNA_M-pyrifera_M_contig1075.1596.1|Name=mRNA_M-pyrifera_M_contig1075.1596.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig1075:11586..12447- (Macrocystis pyrifera P11B4 male)back to top |