mRNA_M-pyrifera_M_contig107479.1591.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107479.1591.1
Unique NamemRNA_M-pyrifera_M_contig107479.1591.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A7X5VL20_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7X5VL20_9BACT)

HSP 1 Score: 342 bits (878), Expect = 5.470e-115
Identity = 163/206 (79.13%), Postives = 180/206 (87.38%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKFE 618
            ERCLFCGCHVIISPHK+KA PY+D++  E+D++A+ LPDRR +SQLHLGGGTPTYQ+PA+LDRLL  FF+HF+  PNAELAVEVDPRVTT EHIDVLADHGFNRISLGVQD T EVQVAINRVQS+E+T A+IDHAR RGF GVNVDLIYGLPHQ   TFEETV  VI L  DR+AVYSFAFVPWIRGHQRKLMED LP  ATKFE
Sbjct:   16 ERCLFCGCHVIISPHKEKALPYLDMIEVEIDMLAERLPDRRGVSQLHLGGGTPTYQTPAQLDRLLNHFFSHFRAVPNAELAVEVDPRVTTAEHIDVLADHGFNRISLGVQDLTEEVQVAINRVQSLEQTRAVIDHARARGFAGVNVDLIYGLPHQRPETFEETVKQVIALDVDRSAVYSFAFVPWIRGHQRKLMEDALPEAATKFE 221          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A3M1Q1W3_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1Q1W3_9BACT)

HSP 1 Score: 300 bits (769), Expect = 9.960e-98
Identity = 142/206 (68.93%), Postives = 170/206 (82.52%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKFE 618
            ERCLFCGCHVII+PHK++AAPY++LL  E+D++A+ LPDRR +SQLHLGGGTPTY +P +L  LL+     F     AELAVEVDPRVTT EHIDVLAD GFNRIS+GVQDFT EVQ A+ RVQSVE+TAA+++HAR+RGF G N+DLIYGLP+Q   TFE +V  VI LGADR+AVYSFA+VPWIRGHQ+KL E++LPS   KFE
Sbjct:   74 ERCLFCGCHVIITPHKERAAPYIELLEREIDMLAERLPDRRRVSQLHLGGGTPTYHAPRDLAALLEHLLARFTPVDGAELAVEVDPRVTTAEHIDVLADLGFNRISMGVQDFTPEVQQAVGRVQSVEQTAALVEHARRRGFSGTNIDLIYGLPYQRPETFERSVEEVIRLGADRSAVYSFAYVPWIRGHQKKLDENSLPSREVKFE 279          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A7C7YT20_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C7YT20_9BACT)

HSP 1 Score: 289 bits (739), Expect = 2.880e-93
Identity = 140/205 (68.29%), Postives = 165/205 (80.49%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKF 615
            ERCLFCGCHVII+PHK+KAAPY++LL  E++L+A+ L  RR +SQLHLGGGTPTY SPAELD LL RFF  F++   AELAVE DPRVT+ +HID LA HGFNRIS GVQDFT +VQ AI+RVQSV ET  ++  AR+RGF G+NVDLIYGLPHQT  TFEE++  VI LG DR AVYSFAFVPW+RGHQ++L E + PS   KF
Sbjct:   69 ERCLFCGCHVIITPHKEKAAPYLNLLGREIELVAEKLKGRRKVSQLHLGGGTPTYYSPAELDALLNRFFQFFEKTEGAELAVECDPRVTSVDHIDALAAHGFNRISFGVQDFTPKVQQAIDRVQSVAETEELMLRARERGFRGINVDLIYGLPHQTLETFEESLKAVIALGPDRVAVYSFAFVPWVRGHQKQLDEKDFPSREQKF 273          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A3M1W173_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M1W173_9BACT)

HSP 1 Score: 288 bits (737), Expect = 7.450e-93
Identity = 138/205 (67.32%), Postives = 161/205 (78.54%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKF 615
             RCLFCGCHVII+PHK+KA PY++LL+ EV+++A+ LPDRR  SQLHLGGGTPTY  P  L  +L+R    F     AE+AVEVDPRVTT EHID LAD GFNRIS+GVQDFT +VQ A+ RVQSV  T  ++DHAR RGF G+N+DLIYGLP+QT   FE TV TVIDLGADRAAVYSFAFVPW+RGH +KL E +LP   TKF
Sbjct:   78 HRCLFCGCHVIITPHKEKALPYLELLLREVEMVAERLPDRRRFSQLHLGGGTPTYFDPPTLAEMLERLLARFTPVEGAEMAVEVDPRVTTTEHIDRLADLGFNRISMGVQDFTPKVQEAVERVQSVAMTRRLVDHARARGFSGINIDLIYGLPYQTPEGFERTVETVIDLGADRAAVYSFAFVPWMRGHMKKLPEGSLPGRETKF 282          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A1E4BDU1_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Gemmatimonadetes bacterium SCN 70-22 TaxID=1660163 RepID=A0A1E4BDU1_9BACT)

HSP 1 Score: 280 bits (716), Expect = 1.250e-89
Identity = 133/204 (65.20%), Postives = 159/204 (77.94%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATK 612
            +RCLFCGCHVII+ H+  AAPY++LL  E++L+A+ LP RR+ +QLHLGGGTPTY +PA+L  LL   F +F   P AELAVE DPRVTTPEHID LAD GFNRIS GVQD T EVQ AINR+QS+E+T  ++ HAR RGF G+NVDLIYGLP QT  +FE T+ +VI L  DRAAVYSFAFVPW+RGHQ+K+ E  LP   TK
Sbjct:   83 QRCLFCGCHVIITRHRDVAAPYLELLKREIELLAERLPHRRSFAQLHLGGGTPTYYTPAQLTDLLTHLFRYFHAVPGAELAVEADPRVTTPEHIDALADLGFNRISFGVQDLTPEVQEAINRIQSLEQTERLVKHARARGFRGINVDLIYGLPLQTPESFERTIESVIGLQPDRAAVYSFAFVPWVRGHQKKIEESQLPDAQTK 286          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A7C5WII5_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C5WII5_9BACT)

HSP 1 Score: 274 bits (700), Expect = 2.220e-87
Identity = 132/205 (64.39%), Postives = 158/205 (77.07%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKF 615
            ERCLFCGCHVII+PHK +A PY++LL  E+D++A  L +RR++SQLHLGGGTPTY  P EL  LL      F+   +AELAVEVDPRVT  EH+DVLA  GFNR+S+GVQDFT +VQ AI RVQS E T  +++ AR RGF G+N+DLIYGLPHQ   +F  TV  VI + ADR AVYSFAFVPWIRGHQ+KL+ED+LPS  TKF
Sbjct:   70 ERCLFCGCHVIITPHKDRARPYLELLKKEIDMVAAALGERRSVSQLHLGGGTPTYHEPDELRELLSHLLGAFRPTADAELAVEVDPRVTRVEHLDVLAAFGFNRLSMGVQDFTPQVQQAIGRVQSEEATRTLVEAARARGFRGINIDLIYGLPHQQPESFARTVEAVIAMQADRCAVYSFAFVPWIRGHQKKLIEDDLPSRETKF 274          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A2E7NEX6_9BACT (Coproporphyrinogen-III oxidase n=2 Tax=root TaxID=1 RepID=A0A2E7NEX6_9BACT)

HSP 1 Score: 273 bits (697), Expect = 7.820e-87
Identity = 128/206 (62.14%), Postives = 157/206 (76.21%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKFE 618
            ERCLFC CHVII+PH +K  PY+DLL  E+ L+AKHLP RR +SQLHLGGGTPTY  P +L  LL   F  F+R  +AELAVEVDPRVTT EH+DVL + GFNR+S+GVQDFT EVQ +INRVQS +ET  +I +AR++GF G+NVDLIYGLP Q++ +F   V  VI++G DR AVYSFA VPW+R HQ ++ +DNLP    K E
Sbjct:   79 ERCLFCACHVIITPHYEKTVPYLDLLRREISLVAKHLPRRRKVSQLHLGGGTPTYHKPNDLAELLDHLFDRFERCHDAELAVEVDPRVTTFEHLDVLGERGFNRVSMGVQDFTPEVQESINRVQSAKETEELIQYARRKGFRGINVDLIYGLPFQSSDSFARAVDQVINMGVDRLAVYSFALVPWMRAHQNQISQDNLPGRDLKLE 284          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A2D6HJM6_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HJM6_9BACT)

HSP 1 Score: 270 bits (689), Expect = 9.740e-86
Identity = 134/205 (65.37%), Postives = 153/205 (74.63%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKF 615
             RCLFCGCHVII+PHK KAAPY+ LL  E+DL+A+HLP RR  SQLHLGGGTPTY SP EL+RLL      F    +AELAVEVDPRVT+ EHI VLA+HGFNRISLGVQDF   VQ AI RVQSVE T  ++D +R RGF G+N+DLIYGLP Q + +FE TV   I+L  DR AVYSFAFVPWIRGH +KL E + P    K 
Sbjct:   69 SRCLFCGCHVIITPHKHKAAPYLQLLEREIDLVAEHLPHRRRFSQLHLGGGTPTYHSPQELERLLLHLRRSFTPTSDAELAVEVDPRVTSLEHIAVLAEHGFNRISLGVQDFEPNVQEAIARVQSVELTRTLLDASRARGFKGINIDLIYGLPFQESRSFENTVERTIELCPDRVAVYSFAFVPWIRGHMKKLDESDFPDREQKL 273          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A523DSU2_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A523DSU2_9BACT)

HSP 1 Score: 261 bits (668), Expect = 1.480e-82
Identity = 119/206 (57.77%), Postives = 160/206 (77.67%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKFE 618
            E+CLFCGCHVIISP  ++AAPY++++  E++L+AK +P RR  +QLHLGGGTPTY SP EL  L+K   + ++    AE+AVEVDPRVT+ EH+DVLA+ GFNR+S+GVQDFT EVQ  ++R+Q+ E+T A+++HAR+RG+ G+N DLIYGLP QT  TFE T+  V+++  DR A YSFA+VPW++GHQ+KL E  LPS   K E
Sbjct:   71 EQCLFCGCHVIISPDHERAAPYLEMMRREIELLAKRMPKRRKFAQLHLGGGTPTYYSPEELKTLVKAILSEYEPIEGAEIAVEVDPRVTSFEHLDVLAELGFNRMSMGVQDFTPEVQERVHRIQTAEKTQALVEHARRRGYRGINTDLIYGLPLQTPETFEATIDRVLEIAPDRVACYSFAYVPWMQGHQKKLDETELPSREVKVE 276          
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Match: A0A521KCA1_9BACT (Coproporphyrinogen-III oxidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KCA1_9BACT)

HSP 1 Score: 259 bits (662), Expect = 9.480e-82
Identity = 124/206 (60.19%), Postives = 155/206 (75.24%), Query Frame = 1
Query:    1 ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGGGTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADHGFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIYGLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPSPATKFE 618
             RCLFCGC+VII+PHK++  PY++LL  E +L+A  LP RR ++QLHLGGGTPTY +PA+L R+++R    F   P+AELAVEVDPRVT+P H+D LAD GFNRISLGVQDF+  VQ AI R+QS E+T A+ID AR RGF GVN+DLIYGLPHQT  +FE +V T ++L  DRAAVYS+A+VPW   H + +    LP P  K E
Sbjct:   63 HRCLFCGCNVIITPHKERTLPYLELLAREAELVAALLPARRALAQLHLGGGTPTYSAPADLARVVRRILELFPAQPDAELAVEVDPRVTSPAHLDALADLGFNRISLGVQDFSPAVQQAIERIQSPEQTRAVIDRARARGFRGVNLDLIYGLPHQTPDSFEASVRTALELRPDRAAVYSYAYVPWKGAHMKDIDPATLPPPELKLE 268          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107479.1591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5VL20_9BACT5.470e-11579.13Coproporphyrinogen-III oxidase n=1 Tax=Acidobacter... [more]
A0A3M1Q1W3_9BACT9.960e-9868.93Coproporphyrinogen-III oxidase n=1 Tax=Acidobacter... [more]
A0A7C7YT20_9BACT2.880e-9368.29Coproporphyrinogen-III oxidase n=1 Tax=Planctomyce... [more]
A0A3M1W173_9BACT7.450e-9367.32Coproporphyrinogen-III oxidase n=1 Tax=Acidobacter... [more]
A0A1E4BDU1_9BACT1.250e-8965.20Coproporphyrinogen-III oxidase n=1 Tax=Gemmatimona... [more]
A0A7C5WII5_9BACT2.220e-8764.39Coproporphyrinogen-III oxidase n=1 Tax=Acidobacter... [more]
A0A2E7NEX6_9BACT7.820e-8762.14Coproporphyrinogen-III oxidase n=2 Tax=root TaxID=... [more]
A0A2D6HJM6_9BACT9.740e-8665.37Coproporphyrinogen-III oxidase n=1 Tax=Planctomyce... [more]
A0A523DSU2_9BACT1.480e-8257.77Coproporphyrinogen-III oxidase n=1 Tax=Acidobacter... [more]
A0A521KCA1_9BACT9.480e-8260.19Coproporphyrinogen-III oxidase n=1 Tax=Planctomyce... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107479contigM-pyrifera_M_contig107479:1..618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score207.2
Seed ortholog evalue7.2e-51
Seed eggNOG ortholog1448857.JFAP01000004_gene834
Preferred namehemN
KEGG rclassRC00884
KEGG koko:K02495
KEGG ReactionR06895
KEGG Pathwayko00860,ko01100,ko01110,map00860,map01100,map01110
KEGG ModuleM00121
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Belongs to the anaerobic coproporphyrinogen-III oxidase family
EggNOG OGs1MV1I@1224,2YNA4@29547,42M87@68525,COG0635@1,COG0635@2
EC1.3.98.3
COG Functional cat.H
BiGG ReactioniECIAI39_1322.ECIAI39_3134,iZ_1308.Z5403
Best tax levelEpsilonproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size618
Cds size618
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815584.3370638-CDS-M-pyrifera_M_contig107479:0..6181622815584.3370638-CDS-M-pyrifera_M_contig107479:0..618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107479 1..618 -
1692277474.9274607-CDS-M-pyrifera_M_contig107479:0..6181692277474.9274607-CDS-M-pyrifera_M_contig107479:0..618Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107479 1..618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107479.1591.1prot_M-pyrifera_M_contig107479.1591.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107479 1..618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107479.1591.1

>prot_M-pyrifera_M_contig107479.1591.1 ID=prot_M-pyrifera_M_contig107479.1591.1|Name=mRNA_M-pyrifera_M_contig107479.1591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
ERCLFCGCHVIISPHKKKAAPYVDLLMAEVDLIAKHLPDRRTISQLHLGG
GTPTYQSPAELDRLLKRFFTHFQRAPNAELAVEVDPRVTTPEHIDVLADH
GFNRISLGVQDFTHEVQVAINRVQSVEETAAIIDHARKRGFGGVNVDLIY
GLPHQTTATFEETVATVIDLGADRAAVYSFAFVPWIRGHQRKLMEDNLPS
PATKFE
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mRNA from alignment at M-pyrifera_M_contig107479:1..618-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107479.1591.1 ID=mRNA_M-pyrifera_M_contig107479.1591.1|Name=mRNA_M-pyrifera_M_contig107479.1591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107479:1..618- (Macrocystis pyrifera P11B4 male)
GAGCGCTGCCTGTTCTGTGGCTGCCACGTGATCATCTCGCCGCACAAGAA GAAGGCCGCGCCGTACGTCGACCTCTTGATGGCCGAGGTCGACCTGATCG CCAAGCACCTGCCGGACCGGCGCACGATCAGCCAGCTGCACCTGGGCGGC GGCACGCCGACGTACCAGAGTCCCGCCGAGCTGGACCGCTTGCTGAAGCG CTTCTTCACGCACTTCCAGAGAGCGCCGAACGCCGAGCTCGCCGTCGAGG TCGACCCGCGGGTCACGACGCCGGAGCACATCGACGTGCTCGCCGACCAC GGCTTCAACCGCATCAGCCTGGGCGTGCAGGACTTCACGCACGAGGTGCA GGTCGCGATCAACCGGGTGCAGTCGGTCGAGGAGACCGCGGCGATCATCG ACCACGCGCGCAAGCGCGGCTTCGGCGGCGTCAACGTCGACCTGATCTAT GGGCTGCCGCACCAGACGACCGCGACGTTCGAGGAGACGGTCGCGACCGT GATCGACCTCGGCGCGGACCGCGCGGCGGTGTACAGCTTTGCCTTCGTGC CGTGGATCCGCGGCCACCAGCGCAAGCTGATGGAGGACAACCTGCCGTCG CCGGCGACCAAGTTCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107479:1..618-

>mRNA_M-pyrifera_M_contig107479.1591.1 ID=mRNA_M-pyrifera_M_contig107479.1591.1|Name=mRNA_M-pyrifera_M_contig107479.1591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig107479:1..618- (Macrocystis pyrifera P11B4 male)
GAGCGCTGCCTGTTCTGTGGCTGCCACGTGATCATCTCGCCGCACAAGAA
GAAGGCCGCGCCGTACGTCGACCTCTTGATGGCCGAGGTCGACCTGATCG
CCAAGCACCTGCCGGACCGGCGCACGATCAGCCAGCTGCACCTGGGCGGC
GGCACGCCGACGTACCAGAGTCCCGCCGAGCTGGACCGCTTGCTGAAGCG
CTTCTTCACGCACTTCCAGAGAGCGCCGAACGCCGAGCTCGCCGTCGAGG
TCGACCCGCGGGTCACGACGCCGGAGCACATCGACGTGCTCGCCGACCAC
GGCTTCAACCGCATCAGCCTGGGCGTGCAGGACTTCACGCACGAGGTGCA
GGTCGCGATCAACCGGGTGCAGTCGGTCGAGGAGACCGCGGCGATCATCG
ACCACGCGCGCAAGCGCGGCTTCGGCGGCGTCAACGTCGACCTGATCTAT
GGGCTGCCGCACCAGACGACCGCGACGTTCGAGGAGACGGTCGCGACCGT
GATCGACCTCGGCGCGGACCGCGCGGCGGTGTACAGCTTTGCCTTCGTGC
CGTGGATCCGCGGCCACCAGCGCAAGCTGATGGAGGACAACCTGCCGTCG
CCGGCGACCAAGTTCGAGGAGCGCTGCCTGTTCTGTGGCTGCCACGTGAT
CATCTCGCCGCACAAGAAGAAGGCCGCGCCGTACGTCGACCTCTTGATGG
CCGAGGTCGACCTGATCGCCAAGCACCTGCCGGACCGGCGCACGATCAGC
CAGCTGCACCTGGGCGGCGGCACGCCGACGTACCAGAGTCCCGCCGAGCT
GGACCGCTTGCTGAAGCGCTTCTTCACGCACTTCCAGAGAGCGCCGAACG
CCGAGCTCGCCGTCGAGGTCGACCCGCGGGTCACGACGCCGGAGCACATC
GACGTGCTCGCCGACCACGGCTTCAACCGCATCAGCCTGGGCGTGCAGGA
CTTCACGCACGAGGTGCAGGTCGCGATCAACCGGGTGCAGTCGGTCGAGG
AGACCGCGGCGATCATCGACCACGCGCGCAAGCGCGGCTTCGGCGGCGTC
AACGTCGACCTGATCTATGGGCTGCCGCACCAGACGACCGCGACGTTCGA
GGAGACGGTCGCGACCGTGATCGACCTCGGCGCGGACCGCGCGGCGGTGT
ACAGCTTTGCCTTCGTGCCGTGGATCCGCGGCCACCAGCGCAAGCTGATG
GAGGACAACCTGCCGTCGCCGGCGACCAAGTTCGAG
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