mRNA_M-pyrifera_M_contig107461.1589.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A2E3TU06_9ACTN (GTP-binding protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TU06_9ACTN) HSP 1 Score: 236 bits (601), Expect = 2.810e-72 Identity = 124/205 (60.49%), Postives = 156/205 (76.10%), Query Frame = 1 Query: 4 DSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 DSM SA ++A+R GDD RLRRL+Q++VPVAGL+AET ETL+E E++ L L+A LE LLSADRF++A PETPLTS+ER+ LL R GLFGVR++ +I+ V +S LAD LV+ SGLT+LR +L TLF+DRADVLKARSA+LAVERLC P P A +L +E+VMAGAHPFNE+ T+AA+RSGWV G L E+E Sbjct: 219 DSMVSAGRVARRLGDDPRLRRLVQMIVPVAGLVAETGETLSEREYRQLVELSASS--GLEGVLLSADRFIDAPPETPLTSIEREALLSRFGLFGVRVASTMIQEGEVSSSQALADRLVDLSGLTELRQVLETLFVDRADVLKARSALLAVERLCLATPAAPAAERVLAELERVMAGAHPFNEMVTLAAIRSGWVVGPAPKLAELE 421
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A6C7EH45_ILUCY (G domain-containing protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7EH45_ILUCY) HSP 1 Score: 229 bits (583), Expect = 1.240e-69 Identity = 118/205 (57.56%), Postives = 155/205 (75.61%), Query Frame = 1 Query: 4 DSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 DSM SA +IA R GDD RLRRL+Q++VPVAGLLAE+AETLTE E++ L LA + DL+ LLS DRF+E RPETPLTS+ER++LL R GLFG+R +L LI +S L+D L+ SGL LR +LS+LF+DRADVLKARS++LA+ERLC+++ PG ++L G +E++M+ AH FNE+ TMAA+RSGWV G L ++E Sbjct: 216 DSMESAARIAARLGDDTRLRRLVQMIVPVAGLLAESAETLTEAEYRELSQLAD-KLDDLDRLLLSTDRFIEGRPETPLTSIERERLLGRFGLFGIRAALELISSGRATSSTSLSDALLAMSGLDRLRAVLSSLFVDRADVLKARSSLLAIERLCHEHSGRPGVTELEGELERIMSSAHQFNEMNTMAALRSGWVTGPAAQLADLE 419
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A7W5AQV9_9ACTN (Dynamin_N domain-containing protein n=5 Tax=Actinoplanes TaxID=1865 RepID=A0A7W5AQV9_9ACTN) HSP 1 Score: 218 bits (554), Expect = 2.870e-65 Identity = 113/205 (55.12%), Postives = 149/205 (72.68%), Query Frame = 1 Query: 4 DSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 DSMASAR+IA R G DG +RRL+Q VVPVAGLLAETA TLTE E L+ +AA + E LLSADRF A PE LTSLER+ LL R GL+GVRL+ L+RR V T+ LA EL +RSGLT+L+ I+ +LF DRADVLK+RSA+LA+ + D P PG+ + A+E++MA AHPFNEL ++++R+GW+ G+ + + ++E Sbjct: 215 DSMASARRIATRLGTDGNVRRLVQSVVPVAGLLAETAVTLTETEVSQLRKIAALAVKQAEELLLSADRFASAMPELGLTSLEREALLARFGLYGVRLTSTLLRREVATTATALAKELTDRSGLTELKEIIGSLFYDRADVLKSRSALLAMAEIVRDRPR-PGSEAVAAAVEEIMASAHPFNELRVLSSLRAGWITGKPDAVADLE 418
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A0A6U9G5_ACTUT (GTP-binding protein n=1 Tax=Actinoplanes utahensis TaxID=1869 RepID=A0A0A6U9G5_ACTUT) HSP 1 Score: 217 bits (553), Expect = 4.040e-65 Identity = 118/206 (57.28%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LDSMASAR+IA R G D +RRL+Q VVPVAGLLAETA TLTE E L+ +A R E LLSADRFV PE LTSLER+ LL R GLFGVRL+ L+RR V T+A LA EL RSGLT LR I+ +LF++R DVLK+RSA+LAV L P PG + A+E++MA AHPFNEL ++++R+GW+ GR E + E+E Sbjct: 214 LDSMASARRIAARLGTDANVRRLVQSVVPVAGLLAETAVTLTETEVAHLRRIAGLPVRQAEDLLLSADRFVGTMPEVGLTSLEREGLLARFGLFGVRLTSTLLRREVATTAAALAKELAERSGLTQLREIIGSLFLERRDVLKSRSALLAVAELTRARPR-PGTEAVTAAVEEIMASAHPFNELRVLSSLRAGWITGRPEAVAELE 418
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A7C1YCS3_9ACTN (GTP-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YCS3_9ACTN) HSP 1 Score: 212 bits (539), Expect = 4.780e-63 Identity = 109/206 (52.91%), Postives = 150/206 (72.82%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LD+MASARKIA RY + ++RR++Q VVPVAGLLAE+A TLTE EF+ L + RD E LL+ DRFV + + LTS+ER+QLL R G+FG+RL+ L+R+ V T+++L+ E++ RSGL DLR IL +LF +R D+LKARSA+LA+ L D+P PG+ L IE+V+A AHP NEL ++AVRSGW++ ++E L E+E Sbjct: 215 LDAMASARKIAARYSSEPKVRRMVQTVVPVAGLLAESAATLTEAEFQGLALIGKLPSRDAESLLLTTDRFVNSTSDVGLTSMEREQLLKRFGVFGIRLASTLLRQGTVSTASELSREMIARSGLDDLREILGSLFAERRDLLKARSALLALGNLIEDHP-APGSEQLDADIERVVASAHPLNELRILSAVRSGWIQAKDEHLRELE 419
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: UPI000B4AB7E2 (dynamin family protein n=2 Tax=unclassified Kineosporia TaxID=2626061 RepID=UPI000B4AB7E2) HSP 1 Score: 210 bits (535), Expect = 1.880e-62 Identity = 112/205 (54.63%), Postives = 152/205 (74.15%), Query Frame = 1 Query: 4 DSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 DSMASAR+IA R D +RR++Q VVP+AGLLAE+A TLTE E L+ +A PR +E LLS DRF+E PE LTS+ERQ LLDR G+FG+RL+ L+RR+ V T+ DL+ +LV RSGL DL G+L++LF R DVLK+RSA+LA++RL +++P PG+ L G +E++ A AHPFNEL ++A+R+GWV G+ E L ++E Sbjct: 215 DSMASARRIAARLSGDPLVRRVVQTVVPMAGLLAESAVTLTETEVAHLRRIATQPPRTVEGLLLSTDRFLEQMPELGLTSMERQHLLDRFGVFGIRLASTLLRRDGV-TATDLSRDLVARSGLDDLNGVLASLFYRRRDVLKSRSALLALDRLLHEHP-VPGSVALSGELEEITASAHPFNELRVLSALRAGWVAGKPEVLADLE 417
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A1V2QUS6_9PSEU (GTP-binding protein n=2 Tax=Saccharothrix TaxID=2071 RepID=A0A1V2QUS6_9PSEU) HSP 1 Score: 210 bits (535), Expect = 2.300e-62 Identity = 114/206 (55.34%), Postives = 144/206 (69.90%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LDSMASAR++A R G+D +RRL+Q VVPVAGLLAETA TLTE E L+ +A PRD E LLSADRFV RPE LT ER LL R G+FGVRL+ ++RR V T+ DLA EL RSGL L+ +LS+LF +R DVLK RSA+LAV + D+ PG+ L G +E V++ AHPFNEL ++ +R+GWV G+ E + E+E Sbjct: 216 LDSMASARRVATRLGEDPDVRRLVQSVVPVAGLLAETAVTLTEEEVGQLRRIADLPPRDAEELLLSADRFVGTRPELGLTEPERASLLARFGVFGVRLASTVLRRKVAGTATDLARELAERSGLNQLQDLLSSLFFERRDVLKCRSALLAVADVVRDFAG-PGSEALAGEVEAVVSSAHPFNELRVLSGLRAGWVSGKAEVVAELE 420
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A7Y0JGN8_9ACTN (GTP-binding protein n=1 Tax=Actinoplanes sp. TBRC 11911 TaxID=2729386 RepID=A0A7Y0JGN8_9ACTN) HSP 1 Score: 209 bits (533), Expect = 3.810e-62 Identity = 112/206 (54.37%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LDSMASAR+IA R G D +RRL+Q VVPVAGLLAETA TLTE E L+ +A R E LLSADRF A PE LT+LER+ LL+R GLFGVRL+ L+RR V T+ DL+ EL RSGL DLR I+ +LF++R DVLK+RSA+LA+ PG+ + A+E++MA AHPFNEL +++VR+GW+ G+ + + E+E Sbjct: 214 LDSMASARRIAARLGTDANVRRLVQSVVPVAGLLAETAVTLTEVEVAQLRRVADLPVRQAEDLLLSADRFAHAMPELGLTALEREALLNRFGLFGVRLTSTLLRREVATTATDLSRELGYRSGLNDLREIIGSLFLERRDVLKSRSALLALAETARTCVR-PGSEGISAAVEEIMASAHPFNELRVLSSVRAGWITGKADTVAELE 418
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: A0A4R7W6J7_9PSEU (Dynamin family protein n=1 Tax=Actinophytocola oryzae TaxID=502181 RepID=A0A4R7W6J7_9PSEU) HSP 1 Score: 209 bits (533), Expect = 4.350e-62 Identity = 112/206 (54.37%), Postives = 145/206 (70.39%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVERLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LDSMASAR++A R GDD +RRL+Q VVPVAGLLAETA TLTE E L+ +A PR+ E LLSADRFV R E LT ER++LL R G+FGVRL+ ++RR V T+ +LA EL RSGL L+ +LS+LF +R DVLK+RSA+LAV L + PG+ L G +E V++ AHPFNEL ++ +R+GWV G+ E + E+E Sbjct: 213 LDSMASARRVAARLGDDPNVRRLVQSVVPVAGLLAETAVTLTEEEVGQLRRIADLPPREAEELLLSADRFVRTRQELGLTEPEREKLLARFGVFGVRLASTMLRRKVAGTATELAGELAERSGLNQLQDLLSSLFFERRDVLKSRSALLAVSDLVRTFAR-PGSEALAGEVEAVVSSAHPFNELRVLSGLRAGWVSGKAEVVAELE 417
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Match: UPI0018C2D7B5 (dynamin family protein n=1 Tax=Actinoplanes sp. NEAU-A11 TaxID=2792083 RepID=UPI0018C2D7B5) HSP 1 Score: 208 bits (530), Expect = 1.060e-61 Identity = 113/209 (54.07%), Postives = 148/209 (70.81%), Query Frame = 1 Query: 1 LDSMASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAACRPRDLEPYLLSADRFVEARPETPLTSLERQQLLDRLGLFGVRLSLALIRRNVVETSADLADELVNRSGLTDLRGILSTLFMDRADVLKARSAMLAVE---RLCNDYPETPGASDLLGAIEQVMAGAHPFNELTTMAAVRSGWVRGREEDLLEVE 618 LDSMASAR+IA R G D +RRL+Q VVPVAGLLAETA TLTE E L+ +A R E LLSADRFV A PE LT+LER+ LL R GLFGVRL+ L+RR V T+ DL+ EL RSGLT LR I+ +LF++R+DVLK+RSA+LA+ R+C PG + A+E+++A AHPFNEL ++++R+GW+ G+ + + E+E Sbjct: 214 LDSMASARRIATRLGTDANVRRLVQSVVPVAGLLAETAVTLTEVEVAQLRRVADLPVRQAEELLLSADRFVNAMPELGLTNLEREALLARFGLFGVRLTSTLLRREVATTATDLSRELAERSGLTQLREIIGSLFVERSDVLKSRSALLALAETTRVCAQ----PGGEAVAAAVEEILASAHPFNELRVLSSLRAGWITGKPDVVTELE 418 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107461.1589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107461.1589.1 >prot_M-pyrifera_M_contig107461.1589.1 ID=prot_M-pyrifera_M_contig107461.1589.1|Name=mRNA_M-pyrifera_M_contig107461.1589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=203bp MASARKIAKRYGDDGRLRRLIQVVVPVAGLLAETAETLTEWEFKSLKALAback to top mRNA from alignment at M-pyrifera_M_contig107461:2..619+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107461.1589.1 ID=mRNA_M-pyrifera_M_contig107461.1589.1|Name=mRNA_M-pyrifera_M_contig107461.1589.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107461:2..619+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107461:2..619+ >mRNA_M-pyrifera_M_contig107461.1589.1 ID=mRNA_M-pyrifera_M_contig107461.1589.1|Name=mRNA_M-pyrifera_M_contig107461.1589.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1218bp|location=Sequence derived from alignment at M-pyrifera_M_contig107461:2..619+ (Macrocystis pyrifera P11B4 male)back to top |