mRNA_M-pyrifera_M_contig107387.1585.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107387.1585.1
Unique NamemRNA_M-pyrifera_M_contig107387.1585.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A662XEY5_9STRA (Kinesin-like protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEY5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 8.920e-38
Identity = 76/168 (45.24%), Postives = 115/168 (68.45%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVMMQTTARDA 504
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E RH+EETISTL+ A RM RV+       VE DP+ ++ +  +QVR+LK EL +HDAL   +R N  YDE+TPE++  L + +R ++ A T E ED +L LT+V E+RE+ RQ K+++++   D+
Sbjct:  312 QCIVALGSKEPRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGEGRHLEETISTLKLAQRMMRVQNEVATI-VETDPALLLRKYERQVRELKHELVMHDALV--ERTNVVYDEHTPEQKHQLLQMVRRYVDAPTQEMEDEALRLTSVHEIRELFRQFKLLLKSAVTDS 476          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A0W8DWR6_PHYNI (Kinesin-like protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DWR6_PHYNI)

HSP 1 Score: 144 bits (364), Expect = 5.620e-37
Identity = 75/168 (44.64%), Postives = 114/168 (67.86%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVMMQTTARDA 504
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E RH+EETISTL+ A RM RV+       VE DP+ ++ +  +Q+R+LK EL +HDAL   +R    YDE+TPE++  L + +R ++ A T E ED +L LT+V E+RE+ RQ K++ ++  RD+
Sbjct:  308 QCIVALGSKEPRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGEGRHLEETISTLKLAQRMMRVQNEVATI-VETDPALLLRKYERQIRELKHELVMHDALV--ERTAVVYDEHTPEQKHQLQQMIRRYIDAPTQEMEDEALRLTSVHEIRELFRQFKLLFKSYERDS 472          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A3R7MT03_9STRA (Kinesin-like protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7MT03_9STRA)

HSP 1 Score: 144 bits (363), Expect = 7.660e-37
Identity = 75/167 (44.91%), Postives = 114/167 (68.26%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVMMQTTARD 501
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E RH+EETISTL+ A RM RV+       VE DP+ ++ +  +Q+R+LK EL +HDAL   +R    YDE+TPE++  L + +R ++ A T E ED +L LT+V E+RE+ RQ K++ +++A D
Sbjct:  315 QCIVALGSKEPRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGEGRHLEETISTLKLAQRMMRVQNEVATI-VETDPALLLRKYERQIRELKHELVMHDALV--ERTAVVYDEHTPEQKHQLLQMVRRYIDAPTQELEDEALRLTSVHEIRELFRQFKLLFKSSAMD 478          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: K3WBJ2_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBJ2_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 1.090e-36
Identity = 72/168 (42.86%), Postives = 115/168 (68.45%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVMMQTTARDA 504
            +C+VAL+  +  H+P+R ++LT VL+D+LGG S + + AC+W E++H+EETISTL+ A RM RV+       VE DP+ ++ +  KQ+++LK EL +HDAL   +R    YDE+TPE++  L + +R F+ A T E+ED  L LT++ E+RE+ RQ K++++    +A
Sbjct:  316 QCIVALSSKDPRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGESKHLEETISTLKLAQRMMRVQNEVATI-VETDPAILLRKYEKQIKELKHELVMHDALV--ERAGIVYDEHTPEQKHQLLKMIRQFVDAPTVEKEDEVLKLTSMHEIRELFRQFKLLLKNAESEA 480          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A2D4C292_PYTIN (Kinesin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C292_PYTIN)

HSP 1 Score: 142 bits (358), Expect = 2.190e-36
Identity = 72/160 (45.00%), Postives = 112/160 (70.00%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVM 480
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E++H+EETISTL+ A RM RV+     + VE DP  ++ +  KQ+++LK EL +HDAL   +R    YDE+TPE++  L R +++F+ A+T  +ED +L LT+V E+RE+ RQ K++
Sbjct:  163 QCIVALGAKEQRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGESKHLEETISTLKLAQRMMRVQNEV-ASVVESDPMILLRKYEKQIKELKHELXMHDALV--ERTGXVYDEHTPEQKHQLLRMVQTFIDATTPXQEDDALRLTSVHEIRELFRQFKIL 319          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A225VBY5_9STRA (Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBY5_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.890e-36
Identity = 74/160 (46.25%), Postives = 111/160 (69.38%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVM 480
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E RH+EETISTL+ A RM RV+       VE DP+ ++ +  +Q+R+LKQEL +HDAL   +R    YDE+TPE++  L + +R ++ A T E ED +L LT+V+E+RE+ RQ K++
Sbjct:  313 QCIVALGSKEQRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGEGRHLEETISTLKLAQRMMRVQNEVSTI-VETDPALLLRKYERQIRELKQELVMHDALV--ERRAVVYDEHTPEQKHQLQQMVRRYIDAPTQEMEDEALRLTSVQEIRELFRQFKLL 469          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: D0NAK4_PHYIT (Kinesin-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NAK4_PHYIT)

HSP 1 Score: 142 bits (358), Expect = 3.620e-36
Identity = 74/160 (46.25%), Postives = 108/160 (67.50%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVM 480
            +C+VAL   E  H+P+R ++LT VL+D+LGG S + + AC+W E RH+EETISTL+ A RM RV        VE DP+ ++ +  +Q+RDLK EL +HDAL   +R    YDE+TPE++  L + +R ++ A T E ED +L LT+V E+RE+ RQ K++
Sbjct:  308 QCIVALGSREPRHIPYRQTKLTNVLKDSLGGNSNTLMFACIWGEGRHLEETISTLKLAQRMMRVHNEVATI-VETDPALLLRKYERQIRDLKHELVMHDALV--ERTAVVYDEHTPEQKHQLQQVIRRYIDAPTQEMEDEALRLTSVHEIRELFRQFKLL 464          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: D8LC74_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC74_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 5.050e-36
Identity = 81/169 (47.93%), Postives = 110/169 (65.09%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLP-LTTVREMREVLRQVKVMMQTTARDA 504
            +CVVAL+     HVP+R S+LT VL+D+LGG   + L+AC+W EA+H+EET+STLR A+RM RV+       V  DP   + +  + +RDLKQEL +HDALA  DR    YD YTPE+Q  + R+L  F+ A   EEE+AS P L +VR+MRE+ R  K ++     DA
Sbjct:  293 QCVVALSRRNAGHVPYRQSKLTNVLKDSLGGNCNTLLLACIWGEAQHLEETMSTLRLASRMMRVQNETHALEV-LDPMQTLKKQERTIRDLKQELLMHDALA--DRSRVVYDPYTPEQQQGIRRQLEKFVAAQGPEEEEASFPPLESVRQMREICRVFKTLILEVQGDA 458          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A7S2G4Q9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4Q9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.630e-36
Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 1
Query:    1 RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVK 474
            +CV+AL+     HVP+R ++LT VL+D+LGG   + + AC+W E+ H+EET STLR A+RM RV+  +    +  DP  MV +   Q+++LKQEL +HDALA  DR    YD YTPE++ DL ++L SFL+ S  +E D  L  ++VR+MRE+ +Q K
Sbjct:   28 QCVIALSRKGSSHVPYRQTKLTNVLKDSLGGNCNTLMFACIWGESAHLEETTSTLRLASRMMRVQNESLAIEI-TDPVKMVKRQELQIKELKQELLMHDALA--DRTGIVYDPYTPEQRLDLRKKLDSFLECSEDKESDI-LDFSSVRQMREMCKQFK 181          
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Match: A0A2R5GCT9_9STRA (Kinesin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GCT9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.200e-35
Identity = 73/160 (45.62%), Postives = 110/160 (68.75%), Query Frame = 1
Query:    7 VVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEETISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDALAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREMREVLRQVKVMMQ 486
            VVALT G   H+P+R ++LT VL+D+LGG   ++L+AC+W EA+H+EE+ STL+ A RM RV   A  A+V+ D   ++ +  +Q+R+LKQEL +HDALA   R    Y+EYTPEE  ++A ++R F +AS  EEE  ++ + +VR  +E  RQ K+++Q
Sbjct:  284 VVALTSGSRSHIPYRQTKLTNVLKDSLGGNCNTSLIACIWGEAKHLEESTSTLKLAQRMMRVENQA-AANVQSDDGMLLRRYERQIRELKQELMMHDALAN--RSGVSYEEYTPEECRNIALQVRRFAEASVDEEEACAIDIQSVRHAQECFRQFKLLIQ 440          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107387.1585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A662XEY5_9STRA8.920e-3845.24Kinesin-like protein n=2 Tax=Nothophytophthora sp.... [more]
A0A0W8DWR6_PHYNI5.620e-3744.64Kinesin-like protein n=11 Tax=Phytophthora TaxID=4... [more]
A0A3R7MT03_9STRA7.660e-3744.91Kinesin-like protein n=3 Tax=Phytophthora kernovia... [more]
K3WBJ2_GLOUD1.090e-3642.86Kinesin-like protein n=1 Tax=Globisporangium ultim... [more]
A0A2D4C292_PYTIN2.190e-3645.00Kinesin-like protein n=1 Tax=Pythium insidiosum Ta... [more]
A0A225VBY5_9STRA2.890e-3646.25Kinesin n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
D0NAK4_PHYIT3.620e-3646.25Kinesin-like protein n=2 Tax=Phytophthora infestan... [more]
D8LC74_ECTSI5.050e-3647.93Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S2G4Q9_9STRA7.630e-3646.20Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A2R5GCT9_9STRA1.200e-3545.63Kinesin-like protein n=1 Tax=Hondaea fermentalgian... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107387contigM-pyrifera_M_contig107387:116..619 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.5
Seed ortholog evalue1.7e-34
Seed eggNOG ortholog115417.EPrPW00000025452
Preferred nameKLP1
KEGG koko:K10397
Hectar predicted targeting categoryother localisation
EggNOG free text desc.kinesin. Source PGD
EggNOG OGs1MB7W@121069,COG5059@1,KOG4280@2759
COG Functional cat.Z
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04812
Exons1
Model size504
Cds size504
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815583.9744654-CDS-M-pyrifera_M_contig107387:115..6191622815583.9744654-CDS-M-pyrifera_M_contig107387:115..619Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107387 116..619 -
1692277474.7286327-CDS-M-pyrifera_M_contig107387:115..6191692277474.7286327-CDS-M-pyrifera_M_contig107387:115..619Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107387 116..619 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107387.1585.1prot_M-pyrifera_M_contig107387.1585.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107387 116..619 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107387.1585.1

>prot_M-pyrifera_M_contig107387.1585.1 ID=prot_M-pyrifera_M_contig107387.1585.1|Name=mRNA_M-pyrifera_M_contig107387.1585.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
RCVVALTHGEGYHVPFRASRLTEVLRDALGGGSQSALVACVWPEARHMEE
TISTLRFAARMKRVRTAAPVAHVEEDPSAMVHQLRKQVRDLKQELALHDA
LAGPDRVNARYDEYTPEEQADLARRLRSFLQASTTEEEDASLPLTTVREM
REVLRQVKVMMQTTARDA
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mRNA from alignment at M-pyrifera_M_contig107387:116..619-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107387.1585.1 ID=mRNA_M-pyrifera_M_contig107387.1585.1|Name=mRNA_M-pyrifera_M_contig107387.1585.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig107387:116..619- (Macrocystis pyrifera P11B4 male)
CGCTGTGTGGTCGCTCTGACGCACGGAGAAGGGTACCATGTGCCGTTTAG GGCAAGTCGACTCACGGAGGTGCTTCGTGACGCGCTTGGAGGTGGTTCGC AGAGTGCCTTGGTGGCTTGTGTGTGGCCAGAGGCGAGACACATGGAGGAG ACGATTTCAACGTTGCGATTTGCGGCACGAATGAAGCGAGTGCGCACAGC AGCACCTGTGGCACATGTGGAAGAAGATCCTTCGGCGATGGTGCATCAGT TGCGGAAACAAGTGCGGGATTTGAAGCAGGAACTGGCGCTCCATGATGCA TTGGCAGGACCTGATCGAGTCAATGCACGCTACGACGAGTACACTCCCGA AGAACAAGCAGATTTGGCCAGACGACTACGGTCCTTCCTGCAGGCAAGCA CCACCGAGGAAGAAGACGCCTCCTTGCCCCTCACCACGGTGCGGGAGATG CGAGAGGTGCTGCGACAAGTCAAGGTGATGATGCAGACCACGGCGAGAGA TGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107387:116..619-

>mRNA_M-pyrifera_M_contig107387.1585.1 ID=mRNA_M-pyrifera_M_contig107387.1585.1|Name=mRNA_M-pyrifera_M_contig107387.1585.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig107387:116..619- (Macrocystis pyrifera P11B4 male)
CGCTGTGTGGTCGCTCTGACGCACGGAGAAGGGTACCATGTGCCGTTTAG
GGCAAGTCGACTCACGGAGGTGCTTCGTGACGCGCTTGGAGGTGGTTCGC
AGAGTGCCTTGGTGGCTTGTGTGTGGCCAGAGGCGAGACACATGGAGGAG
ACGATTTCAACGTTGCGATTTGCGGCACGAATGAAGCGAGTGCGCACAGC
AGCACCTGTGGCACATGTGGAAGAAGATCCTTCGGCGATGGTGCATCAGT
TGCGGAAACAAGTGCGGGATTTGAAGCAGGAACTGGCGCTCCATGATGCA
TTGGCAGGACCTGATCGAGTCAATGCACGCTACGACGAGTACACTCCCGA
AGAACAAGCAGATTTGGCCAGACGACTACGGTCCTTCCTGCAGGCAAGCA
CCACCGAGGAAGAAGACGCCTCCTTGCCCCTCACCACGGTGCGGGAGATG
CGAGAGGTGCTGCGACAAGTCAAGGTGATGATGCAGACCACGGCGAGAGA
TGCGCGCTGTGTGGTCGCTCTGACGCACGGAGAAGGGTACCATGTGCCGT
TTAGGGCAAGTCGACTCACGGAGGTGCTTCGTGACGCGCTTGGAGGTGGT
TCGCAGAGTGCCTTGGTGGCTTGTGTGTGGCCAGAGGCGAGACACATGGA
GGAGACGATTTCAACGTTGCGATTTGCGGCACGAATGAAGCGAGTGCGCA
CAGCAGCACCTGTGGCACATGTGGAAGAAGATCCTTCGGCGATGGTGCAT
CAGTTGCGGAAACAAGTGCGGGATTTGAAGCAGGAACTGGCGCTCCATGA
TGCATTGGCAGGACCTGATCGAGTCAATGCACGCTACGACGAGTACACTC
CCGAAGAACAAGCAGATTTGGCCAGACGACTACGGTCCTTCCTGCAGGCA
AGCACCACCGAGGAAGAAGACGCCTCCTTGCCCCTCACCACGGTGCGGGA
GATGCGAGAGGTGCTGCGACAAGTCAAGGTGATGATGCAGACCACGGCGA
GAGATGCG
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