mRNA_M-pyrifera_M_contig107376.1580.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A7X5WPH9_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WPH9_9ACTN) HSP 1 Score: 359 bits (922), Expect = 1.670e-119 Identity = 177/206 (85.92%), Postives = 190/206 (92.23%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRDKS+EVSDNGRGIPIDLH KRKVSALEVVFTELHAGGKFGGGAY+SSGGLHGVGASVVNALAAKL+AEVDRDGATH L FKERVAGQF G+KF GHKL+K KRISKNKTGTRVRFWPD DIFDPEA IDVDEIC RAT+ACFLVPGMK++VTDKR GGRKEPF FVSRGGL DLVDHL++G+NVSQVITC GI +F EKVPV+ Sbjct: 28 HRDKSVEVSDNGRGIPIDLHTKRKVSALEVVFTELHAGGKFGGGAYNSSGGLHGVGASVVNALAAKLVAEVDRDGATHSLSFKERVAGQFTGSKFKPGHKLEKLKRISKNKTGTRVRFWPDVDIFDPEARIDVDEICDRATRACFLVPGMKITVTDKRAGGRKEPFVFVSRGGLVDLVDHLSIGDNVSQVITCNGIDSFHEKVPVH 233
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A354B9L4_9ACTN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B9L4_9ACTN) HSP 1 Score: 335 bits (859), Expect = 7.720e-113 Identity = 170/218 (77.98%), Postives = 189/218 (86.70%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGA-----KFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRK-------EPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+SIEV+DNGRGIPIDLHA++KVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALA KL+AEVDRDGATH+LGF ERVAGQF +F++GH L KAKRISKNKTGTRVRFWPDF+IFDP+AVIDV+EIC RATQACFLVPGMKV+VTDKR+ EPF+FVSRGGLADLV+HL+ G V+Q+ITC GI TFTEKVPVN Sbjct: 109 HRDRSIEVADNGRGIPIDLHARKKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAQKLVAEVDRDGATHILGFNERVAGQFANGSTGTGRFSKGHALVKAKRISKNKTGTRVRFWPDFEIFDPDAVIDVEEICRRATQACFLVPGMKVTVTDKRSASGAGESTRLGEPFSFVSRGGLADLVEHLSTGVPVNQIITCSGIDTFTEKVPVN 326
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A2D8GF33_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GF33_9ACTN) HSP 1 Score: 335 bits (859), Expect = 3.560e-108 Identity = 170/218 (77.98%), Postives = 189/218 (86.70%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGA-----KFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRK-------EPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+SIEV+DNGRGIPIDLHA++KVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALA KL+AEVDRDGATH+LGF ERVAGQF +F++GH L KAKRISKNKTGTRVRFWPDF+IFDP+AVIDV+EIC RATQACFLVPGMKV+VTDKR+ EPF+FVSRGGLADLV+HL+ G V+Q+ITC GI TFTEKVPVN Sbjct: 109 HRDRSIEVADNGRGIPIDLHARKKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAQKLVAEVDRDGATHILGFNERVAGQFANGSTGTGRFSKGHALVKAKRISKNKTGTRVRFWPDFEIFDPDAVIDVEEICRRATQACFLVPGMKVTVTDKRSASGAGESTRLGEPFSFVSRGGLADLVEHLSTGVPVNQIITCSGIDTFTEKVPVN 326
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A800IEG9_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IEG9_9ACTN) HSP 1 Score: 326 bits (836), Expect = 2.840e-105 Identity = 156/205 (76.10%), Postives = 179/205 (87.32%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPV 615 HRD+S+EV+DNGRGIP+DLHAKRKVSALEVV TELHAGGKFGGGAY +SGGLHGVGASVVNAL+ KLIA+VDRDG TH L FKER AGQF GAKFT+GH+L++ KRI+K KTGTR+RFWPDFDIFD +AV+D +EIC R TQACFLVPG+K+ V DKRTG EPF FVSRGGL DLVDHL+ G+NV ++IT GI TFTE+VPV Sbjct: 72 HRDRSVEVADNGRGIPVDLHAKRKVSALEVVLTELHAGGKFGGGAYGASGGLHGVGASVVNALSTKLIAQVDRDGHTHELAFKERKAGQFSGAKFTKGHQLERIKRIAKTKTGTRIRFWPDFDIFDKDAVLDFEEICNRVTQACFLVPGVKIKVVDKRTGQSNEPFEFVSRGGLTDLVDHLSNGDNVCEIITLSGIETFTERVPV 276
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A2E4AVX6_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E4AVX6_9ACTN) HSP 1 Score: 321 bits (823), Expect = 2.880e-103 Identity = 154/206 (74.76%), Postives = 180/206 (87.38%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+S+EV+DNGRGIPID HAKRKVSALEVVFTELHAGGKFGGGAY +SGGLHGVGASVVNAL+ KL A+VDR+G TH L FKERVAGQF+G+KFT+ H+L + K+ISK K+GTRVRFWPDFDIFD +A ID+ EIC R TQ+CFLVPG+K+ V DKR GG KEPF FVSRGGL DLVD+L+ GENV+++IT GI TFTE+VPV+ Sbjct: 78 HRDRSVEVADNGRGIPIDKHAKRKVSALEVVFTELHAGGKFGGGAYGASGGLHGVGASVVNALSTKLTAQVDREGYTHELSFKERVAGQFNGSKFTKSHELNRLKKISKTKSGTRVRFWPDFDIFDKDATIDIQEICDRVTQSCFLVPGVKIKVIDKRAGGSKEPFEFVSRGGLKDLVDYLSNGENVTEIITISGIDTFTERVPVD 283
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A7K1Z965_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z965_9ACTN) HSP 1 Score: 320 bits (819), Expect = 9.150e-103 Identity = 161/207 (77.78%), Postives = 177/207 (85.51%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAK-FTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+S+EV D+GRGIPI HAKRKVSA+EVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALA KLI EVDRDG THVLGFK+RVAGQF+G+ F GH+L+K KRIS N+TGTRVRFWPDF+IF P+A +D DE+C R TQACFLVPGM+VSVTDKR GG EPF FVSRGGLADLVDHL+ VS VIT GI TF EKVPVN Sbjct: 67 HRDRSVEVRDHGRGIPIGRHAKRKVSAVEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALATKLIVEVDRDGGTHVLGFKKRVAGQFNGSNNFKPGHQLEKIKRISNNRTGTRVRFWPDFEIFKPDARVDFDEVCERVTQACFLVPGMRVSVTDKRAGGAPEPFVFVSRGGLADLVDHLSDAPPVSGVITGNGIDTFVEKVPVN 273
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A2E5P0M0_9ACTN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5P0M0_9ACTN) HSP 1 Score: 307 bits (786), Expect = 1.390e-101 Identity = 149/206 (72.33%), Postives = 173/206 (83.98%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+S+EVSDNGRGIPID HAKRKVSALEVV TELHAGGKFGGGAY +SGGLHGVGASVVNAL++KL+A+VDRDG T+ L F+ERVAGQF G+ FT GH+L K KRISKNKTGTR+RFW D D+FD +A +D +E+ R QACFLVPG+K+ VTDKR G +PF FVSRGGLADLVDHL+ GEN +VI GI TFTE+VPV+ Sbjct: 81 HRDQSVEVSDNGRGIPIDRHAKRKVSALEVVLTELHAGGKFGGGAYGASGGLHGVGASVVNALSSKLVAQVDRDGHTYELAFRERVAGQFSGSSFTAGHQLAKVKRISKNKTGTRIRFWADRDVFDTDARVDTEEVHQRVVQACFLVPGVKIRVTDKRAGASSDPFEFVSRGGLADLVDHLSNGENACEVIALSGIDTFTERVPVD 286
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A382UZS2_9ZZZZ (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382UZS2_9ZZZZ) HSP 1 Score: 300 bits (769), Expect = 3.320e-100 Identity = 149/206 (72.33%), Postives = 172/206 (83.50%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD+S+EV+D+GRGIPID HAKRKVSALEVV TELHAGGKFGGGAY +SGGLHGVGASVVNAL+ K++A+VDRDG TH L F+ERVAG F G+ F GH L + KRISKNKTGTR+RFWPD +IFD A ID DEI R Q+CFLVPG+KV + DKRTGG EPF FVSRGGLADLVDHL+VG+N +VIT GI+ FTE+VPV+ Sbjct: 44 HRDQSVEVADDGRGIPIDRHAKRKVSALEVVLTELHAGGKFGGGAYGASGGLHGVGASVVNALSTKMVAQVDRDGHTHELAFRERVAGHFSGSSFAAGHDLAQVKRISKNKTGTRIRFWPDREIFDDNARIDADEIRQRIVQSCFLVPGVKVRLIDKRTGGG-EPFEFVSRGGLADLVDHLSVGDNACEVITLSGISEFTERVPVD 248
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A3M2H320_ACTSX (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H320_ACTSX) HSP 1 Score: 308 bits (789), Expect = 1.360e-98 Identity = 148/205 (72.20%), Postives = 172/205 (83.90%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPV 615 HRD S+EV+DNGRGIPID H K++VSALEVVFTELHAGGKFGGGAY +SGGLHGVGASVVNAL+ +L+ EVDRDG TH L F++RVAG FD +FT H L+K KRISKNKTGTRVRFWPD D+FDP+A ID EIC RAT+ACFLVPG++ + DKR G EPF FVSRGGL+DLVDHL++GE V+ V+TC G+ TFTEKVPV Sbjct: 39 HRDGSVEVADNGRGIPIDRHKKKRVSALEVVFTELHAGGKFGGGAYGASGGLHGVGASVVNALSTRLVVEVDRDGHTHQLSFRDRVAGHFDQKRFTPSHTLRKVKRISKNKTGTRVRFWPDRDLFDPDARIDFAEICERATRACFLVPGLRFTAVDKRPGATAEPFEFVSRGGLSDLVDHLSIGEAVTGVVTCSGVDTFTEKVPV 243
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Match: A0A381SNM6_9ZZZZ (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381SNM6_9ZZZZ) HSP 1 Score: 310 bits (794), Expect = 1.380e-98 Identity = 150/206 (72.82%), Postives = 173/206 (83.98%), Query Frame = 1 Query: 1 HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGGLHGVGASVVNALAAKLIAEVDRDGATHVLGFKERVAGQFDGAKFTRGHKLQKAKRISKNKTGTRVRFWPDFDIFDPEAVIDVDEICARATQACFLVPGMKVSVTDKRTGGRKEPFAFVSRGGLADLVDHLAVGENVSQVITCIGIATFTEKVPVN 618 HRD S+EV+DNGRGIPID H KRKVSALEVV TELHAGGKFGGGAY +SGGLHGVGASVVNAL+AKL+A+VDRDG+TH L F+ERVAG F G+ FT GH+L+K KRISKNKTGTR+RFWPD +IFD EA ID D++ R QACFLVPG+K+ V DKR GG +PF FVSRGGLADLVDHL+ G N +VIT GI+TF E+VPV+ Sbjct: 113 HRDHSVEVADNGRGIPIDRHTKRKVSALEVVLTELHAGGKFGGGAYGASGGLHGVGASVVNALSAKLVAQVDRDGSTHELAFRERVAGHFSGSSFTAGHQLEKIKRISKNKTGTRIRFWPDREIFDAEARIDADQVRERVVQACFLVPGVKIRVVDKRAGGSADPFEFVSRGGLADLVDHLSTGGNACEVITLSGISTFEERVPVD 318 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107376.1580.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107376.1580.1 >prot_M-pyrifera_M_contig107376.1580.1 ID=prot_M-pyrifera_M_contig107376.1580.1|Name=mRNA_M-pyrifera_M_contig107376.1580.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp HRDKSIEVSDNGRGIPIDLHAKRKVSALEVVFTELHAGGKFGGGAYSSSGback to top mRNA from alignment at M-pyrifera_M_contig107376:3..620- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107376.1580.1 ID=mRNA_M-pyrifera_M_contig107376.1580.1|Name=mRNA_M-pyrifera_M_contig107376.1580.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107376:3..620- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107376:3..620- >mRNA_M-pyrifera_M_contig107376.1580.1 ID=mRNA_M-pyrifera_M_contig107376.1580.1|Name=mRNA_M-pyrifera_M_contig107376.1580.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig107376:3..620- (Macrocystis pyrifera P11B4 male)back to top |