mRNA_M-pyrifera_M_contig107374.1578.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A1Z9UDJ4_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UDJ4_9GAMM) HSP 1 Score: 236 bits (602), Expect = 1.110e-72 Identity = 126/208 (60.58%), Postives = 159/208 (76.44%), Query Frame = 1 Query: 1 LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVA--GHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSYA 618 LG+FQ+NQLA L++N+W TGI AM +VG +V A +VP MCA+Y+ G L+VVFD+ + VP V I++GAF P A IGG AG+ F+E+LV GV+RAVFSNEAGVGT ALAHGAA+TAEPVREGLV MLGPFIDTHLICTLTALVILT+G+ G + G++M A AFE+S+PG+GA +LS+ FALFA++TM +YA Sbjct: 179 LGVFQSNQLAQLLDNQWSFPPLATGIIAMLIVGGVVTGGSVRIGRVAGSLVPLMCAIYIVGSLLVVFDNIELVPTVFASIIYGAFTPEAGIGGAAGITFREVLVMGVRRAVFSNEAGVGTEALAHGAAQTAEPVREGLVGMLGPFIDTHLICTLTALVILTAGLGADGSDTGIIMAAKAFESSVPGYGANILSIAFALFAVTTMTTYA 386
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A3D5DF18_9GAMM (Sodium/alanine symporter (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DF18_9GAMM) HSP 1 Score: 214 bits (545), Expect = 6.940e-66 Identity = 110/157 (70.06%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 1 LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTAL 471 L IFQANQLA L+ N+W +AN +TG TAM +VG+IVI + VP MC LY+ G VVV DHA++VP VL+ I+ GAFDP+A+IGG G+AFKEIL+TGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAM+GPFIDTHLICTLTAL Sbjct: 161 LSIFQANQLAQLMSNQWSIANELTGFTAMIIVGVIVIGGVTRIAQVTGYAVPAMCLLYLLGSFVVVIDHAEQVPHVLYAIIVGAFDPTALIGGSIGIAFKEILITGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMIGPFIDTHLICTLTAL 317
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A661C6A9_9GAMM (Sodium/alanine symporter (Fragment) n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661C6A9_9GAMM) HSP 1 Score: 214 bits (546), Expect = 5.630e-65 Identity = 117/205 (57.07%), Postives = 149/205 (72.68%), Query Frame = 1 Query: 1 LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 L +FQ NQLA+L+++E + TGI A+ +GII+I IVP M YV LVV+ + D VP +L I++ AF AV GG GL FK++LVTG+KRA+FSNEAGVGT A+AHGAA+T EPVREGLVAMLGPFIDTH++CT TALVIL+SGV ++GVVMTA +F+ S+PGFG I++ +VF LFALSTMV+Y Sbjct: 162 LPLFQVNQLASLLQSELSITPLFTGIAALLFIGIIIIGDVKRVGKVTAMIVPFMFLAYVISSLVVIIINFDAVPGILLDIIYSAFGKEAVYGGATGLVFKQVLVTGIKRAIFSNEAGVGTEAMAHGAAQTREPVREGLVAMLGPFIDTHIVCTCTALVILSSGVYSGDSGVVMTAMSFKQSLPGFGDIIVYLVFTLFALSTMVTY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A836TWX3_9GAMM (Sodium:alanine symporter family protein n=1 Tax=Thiotrichaceae bacterium TaxID=2030882 RepID=A0A836TWX3_9GAMM) HSP 1 Score: 203 bits (517), Expect = 3.070e-60 Identity = 111/203 (54.68%), Postives = 143/203 (70.44%), Query Frame = 1 Query: 7 IFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 +FQ NQLA+L+ NE + +G+ A+ L+GII+I IVP M YV LV++ + D VP +L IV AF A+ GG GL FKE+LVTG+KRA+FSNEAGVGT +AHGAA+T EPVREGLVAMLGPFIDTH++CT TALVIL+SGV ++GV+MTA +F S+PG G +++ VF LFALSTM++Y Sbjct: 164 LFQVNQLASLLHNELSIEPLHSGLVALVLIGIIIIGDVKRVGIATAGIVPFMFLAYVISSLVIIIINFDAVPVILIDIVKSAFGTEAIYGGATGLVFKEVLVTGIKRAIFSNEAGVGTEVMAHGAAKTKEPVREGLVAMLGPFIDTHIVCTCTALVILSSGVNPMDSGVLMTAESFNQSLPGVGKLIVYFVFTLFALSTMITY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A849MMI2_9PROT (Alanine:cation symporter family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A849MMI2_9PROT) HSP 1 Score: 203 bits (517), Expect = 3.070e-60 Identity = 106/203 (52.22%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 7 IFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 +FQ NQLA L++NE +A TG+ A+ +G+++I IVP M YV L+++F + D +PA+ I + AF AV GG GL FKE+ VTG+KRA+FSNEAGVGT +AHGAA+T EPVREGLVAMLGPF DTH++CT TALVIL+SG+ ++GV+MTA +F S+PG G +++ VF LFALSTM++Y Sbjct: 164 LFQVNQLAGLLKNELSIAPLYTGMIALVFIGVVIIGDVKRVGTVTARIVPFMFLAYVISSLIIIFINLDTIPAIFIDIFYSAFGKEAVYGGATGLVFKEVFVTGIKRAIFSNEAGVGTEVMAHGAAKTKEPVREGLVAMLGPFFDTHIVCTCTALVILSSGINPIDSGVLMTAESFNQSLPGIGNLIVYFVFTLFALSTMITY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A2E2WQ16_9GAMM (Sodium/alanine symporter n=1 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E2WQ16_9GAMM) HSP 1 Score: 200 bits (508), Expect = 8.500e-59 Identity = 108/203 (53.20%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 7 IFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 +FQ NQLA I +E+ + TGI + ++GI+++ A IVP M YV +V+ + D VP VL I+ AF +A+ GG GL FKEILVTG+KRA+FSNEAGVGT A+AHGAA+T EPVREGLVAMLGPFIDTH++CT TALVILTSG+ E+G++MTA +F ++P G I++ +VF+LFA+STM++Y Sbjct: 164 MFQINQLATFIHSEFSILPIYTGIVCLLIIGIVILGDVKRVGSVAARIVPFMFLTYVLSSFIVITINFDEVPKVLVDIINSAFGMNAISGGATGLVFKEILVTGIKRAIFSNEAGVGTEAMAHGAAKTKEPVREGLVAMLGPFIDTHIVCTCTALVILTSGIYTSESGILMTAMSFNQALPNIGNIIVYLVFSLFAISTMITY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A7V2EKX9_9BACT (Sodium:alanine symporter family protein n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7V2EKX9_9BACT) HSP 1 Score: 198 bits (504), Expect = 3.050e-58 Identity = 100/205 (48.78%), Postives = 140/205 (68.29%), Query Frame = 1 Query: 1 LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 L +FQ NQL+ L+EN+W + TG M VGI+++ IVP M ++YV L ++ +A VP + I+ AF A++GGG + FKE+L+ G+KRA FSNEAG+GTA +AHGAA+T EPVREGL+AMLGPF+DT+L+CT+TALVIL +G E GVVMT +AFE MPG G +++++ +F++STM+SY Sbjct: 162 LALFQVNQLSGLLENDWGIGKLYTGTACMLAVGIVILGGIVRVGQVTSRIVPVMFSVYVISALYIILSNASIVPGLFKTIIASAFGGEALVGGGTAIVFKEVLINGIKRAAFSNEAGIGTAPMAHGAAKTNEPVREGLIAMLGPFLDTNLVCTMTALVILATGAVPQEDGVVMTVNAFEHGMPGMGRYVMTLIIIMFSISTMISY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A2E6HN27_9GAMM (Sodium/alanine symporter n=2 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6HN27_9GAMM) HSP 1 Score: 197 bits (500), Expect = 1.070e-57 Identity = 105/203 (51.72%), Postives = 145/203 (71.43%), Query Frame = 1 Query: 7 IFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 IFQ NQL++ I +E+ ++ TG+ + ++GI+++ IVP M YV LVV+ + + VP VL I+ AF SA+ GG G FKE+LVTG+KRA+FSNEAGVGT A+AHGAA+T EPVREGLVAMLGPFIDTH++CT TALVILTSG+ E+G++MTA +F ++P G I++ +VF+LFA++TM++Y Sbjct: 164 IFQVNQLSSFIHSEFAISPLNTGVVCLLIIGIVILGDVKRVGSVTAKIVPFMFLTYVISSLVVITINFNEVPRVLMDIINSAFGMSAIGGGATGFIFKEVLVTGIKRAIFSNEAGVGTEAMAHGAAKTKEPVREGLVAMLGPFIDTHIVCTCTALVILTSGIYTSESGIIMTAMSFNQALPNIGNIIVYLVFSLFAITTMITY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A660PQZ3_9BACT (Sodium/alanine symporter n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A660PQZ3_9BACT) HSP 1 Score: 196 bits (498), Expect = 2.380e-57 Identity = 100/205 (48.78%), Postives = 141/205 (68.78%), Query Frame = 1 Query: 1 LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 L +FQ NQL+ L+E +W V +TG+ M LVG +++ +VP M LY+ L ++F +A ++P + I AF A +GGGAG A +E++VTGVKRA FSNEAG+GTA +AHGAA+T EP REGL+AMLGPFIDT+++CTLTALVI+++GV+ H+ G VMT +AF M G ++++V LF++STM+SY Sbjct: 162 LALFQVNQLSGLLEADWEVNRILTGVVCMVLVGAVILGGIVRVGLVTSRVVPAMFVLYLISALYIIFQNASQIPDIFASIFSAAFGLEAAVGGGAGFAVREVIVTGVKRAAFSNEAGIGTAPMAHGAAKTKEPAREGLIAMLGPFIDTNIVCTLTALVIISTGVSPHDDGAVMTTNAFAEVMGSTGRYIMTLVILLFSISTMISY 366
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Match: A0A2E6KR21_9GAMM (Sodium/alanine symporter n=3 Tax=Legionellales bacterium TaxID=2026754 RepID=A0A2E6KR21_9GAMM) HSP 1 Score: 196 bits (497), Expect = 4.590e-57 Identity = 101/203 (49.75%), Postives = 145/203 (71.43%), Query Frame = 1 Query: 7 IFQANQLANLIENEWHVANWVTGITAMSLVGIIVIXXXXXXXXXARFIVPGMCALYVGGGLVVVFDHADRVPAVLHGIVFGAFDPSAVIGGGAGLAFKEILVTGVKRAVFSNEAGVGTAALAHGAARTAEPVREGLVAMLGPFIDTHLICTLTALVILTSGVAGHEAGVVMTAHAFEASMPGFGAILLSVVFALFALSTMVSY 615 +FQ NQLA+ I +E+ ++ TGI + ++G +++ IVP M +Y+ +V+ + + +P VL I AF +A+ GG GL FKE+LVTG+KRA+FSNEAGVGT A+AHGAA+T EPVREGLVAMLGPFIDTH++CT TALVILTSG++ E+G++MTA +F ++P G +++ +VF+LFA+STM++Y Sbjct: 180 MFQVNQLASFIHSEFSISPTNTGIACLLIIGFVILGDIKRVGLFTAKIVPFMFVIYLISSFIVIVININEIPKVLADIFSSAFGINAISGGATGLIFKEVLVTGIKRAIFSNEAGVGTEAMAHGAAKTKEPVREGLVAMLGPFIDTHIVCTCTALVILTSGISTSESGIIMTAMSFNQALPNIGNMIVYLVFSLFAISTMITY 382 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107374.1578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107374.1578.1 >prot_M-pyrifera_M_contig107374.1578.1 ID=prot_M-pyrifera_M_contig107374.1578.1|Name=mRNA_M-pyrifera_M_contig107374.1578.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp LGIFQANQLANLIENEWHVANWVTGITAMSLVGIIVIGGVGRIGRVARFIback to top mRNA from alignment at M-pyrifera_M_contig107374:2..619+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107374.1578.1 ID=mRNA_M-pyrifera_M_contig107374.1578.1|Name=mRNA_M-pyrifera_M_contig107374.1578.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107374:2..619+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107374:2..619+ >mRNA_M-pyrifera_M_contig107374.1578.1 ID=mRNA_M-pyrifera_M_contig107374.1578.1|Name=mRNA_M-pyrifera_M_contig107374.1578.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig107374:2..619+ (Macrocystis pyrifera P11B4 male)back to top |