mRNA_M-pyrifera_M_contig107336.1566.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: UPI00145A227C (ABC transporter permease n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145A227C) HSP 1 Score: 277 bits (709), Expect = 1.490e-89 Identity = 155/206 (75.24%), Postives = 175/206 (84.95%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGRGGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTISS 618
IADAGR+MTGPIL+GHVQRLVA ELPGV MRR+ P ++ +AGGLSPQQ A LD+ + AM GS D++G +G LV VET+AGRGGG VSYYAGAVAVMFLLFSAMQGAATLIEER SGIIDR+AVG AGTDVIV+AKFLFLT+QG+ QV+LIFLVAWLAYGVDVP W TT+LAATAAAGLAL MASAC ++QQANTISS
Sbjct: 118 IADAGRAMTGPILAGHVQRLVARELPGVSMRRVAPTIDAMAGGLSPQQQAQLDSAIDAMGNEGS-ADESG-DGALVSVETIAGRGGGVTVSYYAGAVAVMFLLFSAMQGAATLIEERTSGIIDRIAVGRAGTDVIVLAKFLFLTIQGIFQVSLIFLVAWLAYGVDVPSHFLAWLATTVLAATAAAGLALAMASACVSRQQANTISS 321
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A1K2HTE4_9HYPH (ABC-2 type transport system permease protein n=1 Tax=Devosia enhydra TaxID=665118 RepID=A0A1K2HTE4_9HYPH) HSP 1 Score: 207 bits (526), Expect = 5.030e-62 Identity = 122/206 (59.22%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGRG-GGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTIS 615
+ D G+ M G I+SGHVQR++A +LP +G+ R PA+ +L GG SP+Q A L AG+ D ++ + LV ++T G A V+YYAGAVA++FLLFSAMQGAATLIEERNSGI+DRLAVGPAGTDV+VI KFLFLT QG++QV LIFLVA +AY V + W +TTLLAA AAAGL LL+ASACT+KQQA TIS
Sbjct: 118 VIDPGKLMAGSIVSGHVQRILAEKLPEIGLSRTAPAIGQLVGGFSPEQQARLAAGL---DAVAAEPPPTEGSDALVRLDTTGPSGEASATVTYYAGAVAILFLLFSAMQGAATLIEERNSGIVDRLAVGPAGTDVVVIGKFLFLTAQGVIQVFLIFLVAAIAYRVAFWDEALAWSLTTLLAAAAAAGLGLLVASACTSKQQAQTIS 320
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: UPI000D3A1BFE (ABC transporter permease n=1 Tax=Devosia submarina TaxID=1173082 RepID=UPI000D3A1BFE) HSP 1 Score: 206 bits (523), Expect = 1.310e-61 Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGRGG-GANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTIS 615
+ D G+ M G ILSG VQR++A LP + + R +PAVE L GG +P+QSA L A M+ M +D+ A LV + +GG G V+YYAGAVA++FLLFSAMQ AATLIEER+SGI+DR+A+GPAGTDV+VI K++FLT+QG+VQV LIFLVA L YGVDV W WF+T+L AA A+GL L +AS CT++QQA TIS
Sbjct: 117 LVDPGKVMAGAILSGQVQRVLAKHLPDLSLARTLPAVESLVGGWTPEQSARLTAAMEQMAAANADQPPA-----LVQTSFVGPQGGSGGTVTYYAGAVAILFLLFSAMQSAATLIEERHSGILDRIAIGPAGTDVVVIGKWIFLTVQGMVQVALIFLVAALVYGVDVLSHSWLWFLTSLAAAATASGLGLAVASICTSRQQAQTIS 317
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A0F5L777_9HYPH (Uncharacterized protein n=1 Tax=Devosia soli TaxID=361041 RepID=A0A0F5L777_9HYPH) HSP 1 Score: 206 bits (523), Expect = 1.380e-61 Identity = 117/204 (57.35%), Postives = 150/204 (73.53%), Query Frame = 1
Query: 7 DAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGRGG-GANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTIS 615
D G+ M G ILSG VQRL+ LE+P + + R P + + GG +P+QSA L A ++ + G+D A LV ET+ +GG GA+V+YYAGAVA++FLLFSAMQ +ATLIEER+SGI+DR+AVGPAGTDV+V+ KFLFLTLQG++QV LIF VA L Y VDV + W +T++ AA AAAGL L +A+ACTTKQQA TIS
Sbjct: 119 DPGKLMAGAILSGQVQRLIGLEMPDLALSRTAPDISSIVGGFTPEQSARLAAAIEQLAANGAD---ASGQANLVATETVGPQGGSGASVTYYAGAVAILFLLFSAMQSSATLIEERSSGIVDRVAVGPAGTDVVVLGKFLFLTLQGIIQVALIFTVAALVYRVDVVNHLGLWLLTSIAAAFAAAGLGLAVAAACTTKQQAQTIS 319
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A1Y6EV52_9HYPH (ABC-2 type transport system permease protein n=1 Tax=Devosia lucknowensis TaxID=1096929 RepID=A0A1Y6EV52_9HYPH) HSP 1 Score: 202 bits (515), Expect = 2.230e-60 Identity = 118/204 (57.84%), Postives = 149/204 (73.04%), Query Frame = 1
Query: 7 DAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGR-GGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTIS 615
D G+ M G IL+G VQR++ ++LP + + R P +E L GG +P+QSA LDA + + E GS A GLV T+ + G GA V+YYAGAVA++FLLFSAMQ AATLIEER+SGIIDR+AVGPAGTDV+VI KFLFL++QG+VQV+LIFLVA L Y V+V + W +TTL+AA A GL L +A+ CTTKQQA TIS
Sbjct: 119 DPGKVMAGAILAGQVQRVIGIDLPDLALARSAPTIETLVGGFTPEQSARLDAAIAQLAENGSS--DAENQAGLVESRTVGPQDGSGATVTYYAGAVAILFLLFSAMQSAATLIEERHSGIIDRIAVGPAGTDVVVIGKFLFLSVQGIVQVSLIFLVAALVYDVEVISHLGIWLLTTLVAAAAXXGLGLAVAALCTTKQQAQTIS 320
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A1I7NV12_9HYPH (ABC-2 type transport system permease protein n=1 Tax=Devosia crocina TaxID=429728 RepID=A0A1I7NV12_9HYPH) HSP 1 Score: 199 bits (507), Expect = 3.410e-59 Identity = 114/205 (55.61%), Postives = 150/205 (73.17%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLAGRGGG-ANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTI 612
+ D + + G ILSG VQRL+ LE+P + + R PA+E + GG +P+QSA L A A+ E G + D + GLV T+ G A ++YYAGAVA++FLLFSAMQ +ATLIEER+SGI+DR+AVGPAGTDV+V+ KFLFLT+QG+VQV LIFLVA + YGVDV + W +T+L AA AA+GL L +A++CTTKQQA+TI
Sbjct: 117 LVDPAKILAGAILSGQVQRLIGLEMPDLALARSAPAIESIVGGFTPEQSARLSA---AIAELGVEPDGDTSQAGLVETRTIGPEGSSTATITYYAGAVAILFLLFSAMQSSATLIEERHSGIVDRVAVGPAGTDVVVLGKFLFLTVQGVVQVALIFLVAGIVYGVDVLPYLPLWLLTSLAAALAASGLGLAVAASCTTKQQAHTI 318
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A5B0E005_9HYPH (ABC transporter permease n=1 Tax=Aureimonas fodinaquatilis TaxID=2565783 RepID=A0A5B0E005_9HYPH) HSP 1 Score: 194 bits (493), Expect = 4.220e-57 Identity = 112/207 (54.11%), Postives = 150/207 (72.46%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETL--AGRGGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTIS 615
+ D G+ + G ILSG +QRL+A ELP + + R VE LAGG + +Q A LDA ++A+ + G + LV +E + AGR A +SYYAGAV+++FLLFS++QGAATLIEER++GI+DR+AVGPAGTDV+VI KFLFLT+QG++QV LIF A L + +DV + WF+ TL A+ AAAGL L++ASACT+KQQA TIS
Sbjct: 117 LVDPGKVLAGAILSGRLQRLIASELPDIALARTAVTVEALAGGFTTEQKARLDAALRAVADEGGSMEGVAP---LVSIEEVEPAGRAS-ATISYYAGAVSILFLLFSSLQGAATLIEERHAGILDRIAVGPAGTDVVVIGKFLFLTVQGIIQVALIFSAAALIHDLDVTSRFGAWFIVTLAASAAAAGLGLVVASACTSKQQAQTIS 319
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A6M1SBS2_9HYPH (ABC transporter permease n=1 Tax=Devosia aurantiaca TaxID=2714858 RepID=A0A6M1SBS2_9HYPH) HSP 1 Score: 192 bits (487), Expect = 3.320e-56 Identity = 111/205 (54.15%), Postives = 144/205 (70.24%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVE-TLAGRGGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTI 612
+ D + + G ILSG VQRL+ L++P + + R P + + GG +P+Q A LDA A+ E +D G GLV E T R GA V+YYAGAVA++FLLFSAMQ +ATLIEERNSGI+DR+A+GPAGTDV+V+ KFLFLT+QG++QV LIF VA L Y VD+ + W +TT A+ AAAGL L +AS CT+KQQA+TI
Sbjct: 117 LVDPAKLLAGAILSGQVQRLIGLQMPDLALSRTAPEIASIVGGFTPEQQARLDA---AIAELSADDTSVGDTAGLVQTEMTGPERASGATVTYYAGAVAILFLLFSAMQSSATLIEERNSGIVDRVAIGPAGTDVVVMGKFLFLTVQGIIQVILIFAVAALVYRVDILPYLPLWLLTTTAASFAAAGLGLAVASICTSKQQAHTI 318
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: UPI000FD8548D (ABC transporter permease n=2 Tax=Devosia TaxID=46913 RepID=UPI000FD8548D) HSP 1 Score: 191 bits (486), Expect = 4.680e-56 Identity = 117/204 (57.35%), Postives = 142/204 (69.61%), Query Frame = 1
Query: 4 ADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLA-GRGGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMASACTTKQQANTI 612
AD +SM IL GHVQR++A +LP V + R P V EL GG SP+QS L A + A+ + + GA+ L + T+ G A V+YYAGAVA++FLLFSAMQGAATLIEERNSGI+DRLAVGPAGTDV+VI KFLFL QG+VQ LIF +A L Y V V WPW +TT+ AA AAAGL L +A+ CT+KQQA TI
Sbjct: 118 ADPAKSMAPAILMGHVQRILAQDLPDVAVSRTAPLVGELVGGFSPEQSQRLTAALNAL---AAGPAEGGASAELSEIHTVGEASDGSAAVTYYAGAVAILFLLFSAMQGAATLIEERNSGIVDRLAVGPAGTDVVVIGKFLFLIGQGVVQAGLIFGLAILLYQVPVLQHWWPWLLTTVAAAVAAAGLGLAVAAFCTSKQQAQTI 318
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Match: A0A4Q3I4W0_9BURK (ABC transporter permease (Fragment) n=1 Tax=Oxalobacteraceae bacterium TaxID=1871070 RepID=A0A4Q3I4W0_9BURK) HSP 1 Score: 186 bits (472), Expect = 5.030e-55 Identity = 107/193 (55.44%), Postives = 138/193 (71.50%), Query Frame = 1
Query: 1 IADAGRSMTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQAMDETGSDRDQAGANGGLVLVETLA-GRGGGANVSYYAGAVAVMFLLFSAMQGAATLIEERNSGIIDRLAVGPAGTDVIVIAKFLFLTLQGLVQVTLIFLVAWLAYGVDVPGQIWPWFVTTLLAATAAAGLALLMA 576
+ D G++M G ILSG VQR++A +LP VGM R P V ++ GG +P Q+ LDA + + + D A L+ +++A G A V+YYAGAVA++FLLFSAMQGAATLIEER++GI+DR+AVGPAGTDV+VI KFLFLTLQG++QV LIFLVA + Y VD + PW +TTL AA AAAGL L +A
Sbjct: 117 LVDPGKAMAGAILSGQVQRVIASKLPDVGMSRTAPLVAKMVGGFTPTQTVQLDAALTGLSQARQDE---AATPSLIGTQSVAQGETSSATVTYYAGAVAILFLLFSAMQGAATLIEERHAGIVDRVAVGPAGTDVVVIGKFLFLTLQGVLQVGLIFLVAAVLYRVDATSRPIPWLLTTLAAAAAAAGLGLAVA 306 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107336.1566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107336.1566.1 >prot_M-pyrifera_M_contig107336.1566.1 ID=prot_M-pyrifera_M_contig107336.1566.1|Name=mRNA_M-pyrifera_M_contig107336.1566.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=199bp MTGPILSGHVQRLVALELPGVGMRRMVPAVEELAGGLSPQQSAALDAGMQback to top mRNA from alignment at M-pyrifera_M_contig107336:3..620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107336.1566.1 ID=mRNA_M-pyrifera_M_contig107336.1566.1|Name=mRNA_M-pyrifera_M_contig107336.1566.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107336:3..620+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107336:3..620+ >mRNA_M-pyrifera_M_contig107336.1566.1 ID=mRNA_M-pyrifera_M_contig107336.1566.1|Name=mRNA_M-pyrifera_M_contig107336.1566.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1194bp|location=Sequence derived from alignment at M-pyrifera_M_contig107336:3..620+ (Macrocystis pyrifera P11B4 male)back to top |