mRNA_M-pyrifera_M_contig107237.1556.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: A0A8B8D2P8_CRAVI (LOW QUALITY PROTEIN: heat shock 70 kDa protein 12A-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8D2P8_CRAVI) HSP 1 Score: 61.6 bits (148), Expect = 1.310e-7 Identity = 55/185 (29.73%), Postives = 92/185 (49.73%), Query Frame = 1
Query: 1 FRDFLSELFGKENWDNVSPASKLALHREWVRDIKEVFRADTRAGGTFKLELSLALEDADLTDEPGLRALCERYNRDKGLAGSDLALRTRERGKTSLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSV 555
FR F+ +L G++ D+ +A H E R+I+ R + + + K+ ++L E +L +E ++L E N G + ++ LR+ + LR F P VD I H+ E ++ +G L I+L GGF++C ++ EA+K+ RV++P+ AV GAVL G P V
Sbjct: 303 FRQFIQDLVGQKLMDDFKKRHPVA-HLELEREIERKKR-NLKGDESLKITINLPAELLELFEEKKGKSLAEFVN-SSGRYREIVDVKNER-----LRIDMKTT-LRMFKPAVDSILDHIEELVSNPVTQG--LRNIILVGGFSDCKIIQEAVKEKFKRFRVVIPQEAGLAVMKGAVLFGHNPLIV 476
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: UPI00145801B8 (heat shock 70 kDa protein 12A-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145801B8) HSP 1 Score: 57.0 bits (136), Expect = 4.900e-6 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 232 GLAGSDLALRTRERGKTSLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSV 555
G + SD+ L TR++ LRL Q+ V+ F+P + ++ HV+ L+ EG IL+ GG++EC LL +A++++ G RV++P P AV GAV++G P V
Sbjct: 377 GWSLSDIQL-TRDK----LRLSQEKVKA-LFEPSLRHVQDHVSGILSNPDVEG--CTAILMVGGYSECSLLQDAIRNIAGDIRVIIPNDPGLAVLKGAVINGHHPEMV 476
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: A0A8B8BD05_CRAVI (heat shock 70 kDa protein 12A-like n=4 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8BD05_CRAVI) HSP 1 Score: 56.2 bits (134), Expect = 8.780e-6 Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 319 FFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYGRFDWFDADK 621
FF V I H+ L + G+++ I+L GGFAE P+L +A+K RV++P A +V GAV+ G P ++ RR++ T FD FD K
Sbjct: 365 FFAETVTEITRHLKNLLQ--QKSGKDIATIILVGGFAESPMLTQAVKSTFSEMRVIIPHEAAWSVLRGAVIFGHDP-GLIKERRSKYTYGLAVFDKFDPKK 462
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: A0A1C9U2Z8_MIZYE (Heat shock 70 kDa protein n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A1C9U2Z8_MIZYE) HSP 1 Score: 56.2 bits (134), Expect = 8.860e-6 Identity = 58/213 (27.23%), Postives = 100/213 (46.95%), Query Frame = 1
Query: 1 FRDFLSELFGKENWDNVSPASKLALHREWVRDIKEVFRADTRAGGTFKLELSLALEDAD----LTDEPGLRALCERYNRDKGLAGSDLALRTRERGKTS-----LRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYGRFDWFD 612
F +FL E+FGK++ +N R+++ D E R F+ + D L P + E + + ++ +D +++ GK L++ V+ FF+ + +I +HV + L GR +D+IL+ GGF++C L+ +A++D +L PE AV GAV+ G P ++V +R AR T Y + FD
Sbjct: 284 FLNFLMEIFGKKSVENFK--------RKYMTDYVEFRR-------NFETKKRTITPQTDGKVMLVLPPSFK---ETFEENSNISFNDALSKSKYSGKVQWVKDKLKIDADVVK-GFFEVPIQQIVSHVRKLLEKI---GR-IDMILMVGGFSDCGLVEQAIRDNFSDVSILNPEDSVLAVLKGAVIFGHKPMAIV-SRVARYTYGYEAWPTFD 472
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: UPI00148A473C (heat shock 70 kDa protein 12A isoform X1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A473C) HSP 1 Score: 56.2 bits (134), Expect = 8.940e-6 Identity = 58/198 (29.29%), Postives = 95/198 (47.98%), Query Frame = 1
Query: 1 FRDFLSELFGKENWDNVSPASKLALHREWVRDIKEVFRADTRAGGTFKLELSLALEDADLTDEPGLRALCERYNRDKGLAGSDLALRTRERGKTSLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYG 594
F D + E+ G EN++ + LA + + +D+ EV + + T K+ ++ + A + + + YN +K ++GK L++P ++F I D I +HV E L + + R +D IL+ GGF+E L E +K + ++VP AV GAVL G P VVV+R A+ V YG
Sbjct: 302 FFDIIKEIVGDENFE-LFKKEDLAGYNDLRKDL-EVKKREINFEST-KISFTVPNQLAKM--------IPKNYNHEKVEC---------KKGKMELKVPGI---KKWFSEICDSIVSHVKELLEEQKKKQRNIDSILMVGGFSESFFLQETVKTAFPNKHIIVPNEAGLAVLKGAVLFGHNP-QVVVSRVAK--VTYG 473
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: A0A8H7UYW5_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UYW5_9FUNG) HSP 1 Score: 54.7 bits (130), Expect = 3.220e-5 Identity = 33/92 (35.87%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 283 SLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLI-GSDRVLVPESPARAVAVGAVLHGLAPTSV 555
+L++ Q ++ + FDPIVDRI + ++L A+ GR++ IL+ GGF++ L + +KD G V+VP AV+ GAV + L P ++
Sbjct: 794 TLKMKNQDMKEKIFDPIVDRIIYLMDDQLNQAKKGGRDIKAILMVGGFSQSKYLQQRIKDQYKGVCHVIVPVEGDTAVSHGAVFYALYPRTI 885
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: UPI001458804C (heat shock 70 kDa protein 12A-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458804C) HSP 1 Score: 54.3 bits (129), Expect = 3.950e-5 Identity = 51/194 (26.29%), Postives = 92/194 (47.42%), Query Frame = 1
Query: 1 FRDFLSELFGKENWDNV---SPASKLALHREWVRDIKEVFRADTRAGGTFKLELSLALEDADLTDEPGLRALCERYNRDKGLAGSDLALRTR------ERGKTSLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSV 555
F DF+ + GK + + S + LHR + + K+ F D AG + + ++ ++YN+D+ +A + T+ + +RL Q R F+ + I HV++ L E ++ IL+ GG++ECPLL +A++++ G+ RV+VP +V GAV++G P +V
Sbjct: 264 FEDFVETVVGKPAYKDFRVHKMPSLIELHRSF-EERKKTF-TDNSAGKKITFRIPFEIIES-----------FKKYNQDRNIAD---VIATKFNPADVDWTHDKIRLSQAKTR-NLFELSLHHITDHVSDILK--NPEVQDCKAILMVGGYSECPLLQDAIRNVAGNIRVIVPSDAGLSVLKGAVINGFFPDAV 438
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: K1QEG3_CRAGI (Heat shock 70 kDa protein 12B n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1QEG3_CRAGI) HSP 1 Score: 54.3 bits (129), Expect = 3.960e-5 Identity = 60/206 (29.13%), Postives = 101/206 (49.03%), Query Frame = 1
Query: 1 FRDFLSELFGKENWDNVSPAS---KLALHREWVRDIKEVFRADTRAGGTFKLELSLALEDADLTDEPGLRALCERYNRDKGLAGSDLALR-TRERGKTSLRLPQQFVRLRFFDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLIGSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYGRFDW 606
F F+ ++ GKE+ + S L L R + ++K+ + G TF L + L L +D+ R + +K + S A + T E K + + F LRFF+ + I+AH+ E L + + +++ IL+ GGFAEC ++ A+++ + R++VPE +V GAV G P ++ R+AR T YG W
Sbjct: 266 FEMFIEDIIGKESMKQLRTTSFDDYLELMRNF--EMKKRSVKPGKEGNTF-LSVPLGLVQIVKSDK-------SRKSLEKAIENSPYAGKVTFENWKLKWK-NENF--LRFFEVTIRNIKAHLREILYDS--DMTDVETILMVGGFAECEVVQNAIREHFKTKRLVVPEDAGVSVLKGAVFFGHVPDAIS-RRKARYT--YGIQSW 453
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: A0A6G1R296_9TELE (Heat shock 70 kDa protein 12A n=17 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6G1R296_9TELE) HSP 1 Score: 54.3 bits (129), Expect = 4.080e-5 Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 322 FDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLI-GSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYGRFDWF 609
F P +D I H+ E + E ++ + L GGFAE PLL +A++D++ G R+++P + GAVL GL P SV+ RR+ T G + F
Sbjct: 449 FKPTIDHIIQHLTELFD--KPEVSDIKFLFLVGGFAESPLLQQAVQDMLQGRSRIIIPHDVGLTILKGAVLFGLDP-SVIKVRRSPLTYGVGVLNRF 542
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Match: UPI001C4B4690 (heat shock 70 kDa protein 12A isoform X2 n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4B4690) HSP 1 Score: 54.3 bits (129), Expect = 4.080e-5 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 1
Query: 322 FDPIVDRIRAHVAEELAAARAEGRELDVILLAGGFAECPLLAEALKDLI-GSDRVLVPESPARAVAVGAVLHGLAPTSVVVARRARRTVAYGRFDWF 609
F P +D I H+ E + E ++ + L GGFAE PLL +A++D++ G R+++P + GAVL GL P S++ RR+ T G + F
Sbjct: 449 FKPTIDHIIQHLTELFE--KPEVSDIKFLFLVGGFAESPLLQQAVQDMLQGRSRIIIPHDVGLTILKGAVLFGLDP-SIIKVRRSPLTYGVGVLNRF 542 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107237.1556.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107237.1556.1 >prot_M-pyrifera_M_contig107237.1556.1 ID=prot_M-pyrifera_M_contig107237.1556.1|Name=mRNA_M-pyrifera_M_contig107237.1556.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=207bp FRDFLSELFGKENWDNVSPASKLALHREWVRDIKEVFRADTRAGGTFKLEback to top mRNA from alignment at M-pyrifera_M_contig107237:2..622+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107237.1556.1 ID=mRNA_M-pyrifera_M_contig107237.1556.1|Name=mRNA_M-pyrifera_M_contig107237.1556.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=621bp|location=Sequence derived from alignment at M-pyrifera_M_contig107237:2..622+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107237:2..622+ >mRNA_M-pyrifera_M_contig107237.1556.1 ID=mRNA_M-pyrifera_M_contig107237.1556.1|Name=mRNA_M-pyrifera_M_contig107237.1556.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1242bp|location=Sequence derived from alignment at M-pyrifera_M_contig107237:2..622+ (Macrocystis pyrifera P11B4 male)back to top |