mRNA_M-pyrifera_M_contig107220.1552.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107220.1552.1
Unique NamemRNA_M-pyrifera_M_contig107220.1552.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A127MBQ5_9SPHN (Sodium-independent anion transporter n=6 Tax=Sphingomonadales TaxID=204457 RepID=A0A127MBQ5_9SPHN)

HSP 1 Score: 361 bits (927), Expect = 4.530e-120
Identity = 196/206 (95.15%), Postives = 201/206 (97.57%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            SVPLID+ELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLG AN+SAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTA+GIALAALFLTPLLASLPIATLAATIIVAVLSLVD KTP TIWRYSK DFAAMAATI VTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPE+EHFRNV+RHKVFTDPR
Sbjct:  257 SVPLIDMELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGAANISAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAVGIALAALFLTPLLASLPIATLAATIIVAVLSLVDFKTPQTIWRYSKMDFAAMAATIIVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPETEHFRNVNRHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: UPI000D694789 (sulfate permease n=1 Tax=Sphingorhabdus sp. EL138 TaxID=2073156 RepID=UPI000D694789)

HSP 1 Score: 358 bits (920), Expect = 5.140e-119
Identity = 193/206 (93.69%), Postives = 199/206 (96.60%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            SVPLIDLELW+ LAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQEL+GLG ANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIA+AALFLTP LASLPIATLAATIIVAVLSLVDLKTP TIW YSK DFAAMAATIG+TLLAGVEPGVIAGV LSLALFLWRSSRPHAAIVGRVPE+EHFRN+DRHKVFTDPR
Sbjct:  257 SVPLIDLELWQKLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELVGLGAANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIAIAALFLTPFLASLPIATLAATIIVAVLSLVDLKTPRTIWLYSKTDFAAMAATIGITLLAGVEPGVIAGVALSLALFLWRSSRPHAAIVGRVPETEHFRNIDRHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A220W7Y3_9SPHN (Putative sulfate transporter n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A220W7Y3_9SPHN)

HSP 1 Score: 358 bits (918), Expect = 1.030e-118
Identity = 195/206 (94.66%), Postives = 199/206 (96.60%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            SVPL+DLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLG AN+SAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTA GIALAALFLTPLLASLPIATLAATIIVAVLSLVD KTP TIWRYSK DFAAMAATI VTLLAGVEPGVIAGV LSLALFLWRSSRPHAAIVGRVPE+EHFRNV+RHKVFTDPR
Sbjct:  257 SVPLVDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGAANISAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAAGIALAALFLTPLLASLPIATLAATIIVAVLSLVDFKTPQTIWRYSKMDFAAMAATIIVTLLAGVEPGVIAGVALSLALFLWRSSRPHAAIVGRVPETEHFRNVNRHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A1L3J8W8_9SPHN (Sodium-independent anion transporter n=2 Tax=Sphingorhabdus lutea TaxID=1913578 RepID=A0A1L3J8W8_9SPHN)

HSP 1 Score: 340 bits (871), Expect = 1.230e-111
Identity = 179/206 (86.89%), Postives = 198/206 (96.12%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            SVPL+++ELW+ LA+PALL+S+IGFVESVSVGQTLAAKRRQRIDPDQELIGLG AN+SAAFSGGYPVTGGFARSVVNFDAGA+TPAAGAFTAI IA+AALF TPLLASLPIATLAATIIVAVLSLVDLKTP  IW+YSK DFAA+AATIGVTL+AGVEPGVI+GV LSLALFLWRSSRPHAAI+GRVPE++HFRN++RHKVFTDPR
Sbjct:  257 SVPLMNVELWQQLAVPALLISVIGFVESVSVGQTLAAKRRQRIDPDQELIGLGAANISAAFSGGYPVTGGFARSVVNFDAGAQTPAAGAFTAIFIAIAALFFTPLLASLPIATLAATIIVAVLSLVDLKTPAAIWKYSKMDFAAIAATIGVTLIAGVEPGVISGVLLSLALFLWRSSRPHAAIIGRVPETQHFRNIERHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A0C5XQ13_SPHYB (Sulfate:proton symporter n=1 Tax=Sphingobium sp. (strain YBL2) TaxID=484429 RepID=A0A0C5XQ13_SPHYB)

HSP 1 Score: 339 bits (869), Expect = 2.400e-111
Identity = 182/206 (88.35%), Postives = 195/206 (94.66%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            +VPL D  LW+ LAIPALLLSIIGFVESVSV QTLAAK+RQRIDPDQELIGLG AN++A+FSGGYPVTGGFARSVVNFDAGAETPAAGAFTA+GIA+AALFLTPLL SLPIATLAATIIVAVLSLVDL+TPLTIWRYS+ADFAAMAATIGVTLL GVEPGVIAGVGLSLAL+LWR+SRPHAAIVGRVPE+ HFRNV RHKV TDPR
Sbjct:  258 TVPLFDAGLWQQLAIPALLLSIIGFVESVSVAQTLAAKKRQRIDPDQELIGLGAANVAASFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAVGIAIAALFLTPLLYSLPIATLAATIIVAVLSLVDLRTPLTIWRYSRADFAAMAATIGVTLLLGVEPGVIAGVGLSLALYLWRTSRPHAAIVGRVPETGHFRNVKRHKVITDPR 463
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A3R8RRY3_9SPHN (Sulfate permease n=2 Tax=Sphingomonadales TaxID=204457 RepID=A0A3R8RRY3_9SPHN)

HSP 1 Score: 336 bits (861), Expect = 3.940e-110
Identity = 181/206 (87.86%), Postives = 191/206 (92.72%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            +VPL D ELW+ LA+PALLLSIIGFVESVSV QTLAAK+RQRI PDQELIGLG AN++AAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTA+GI LAALFLTPLLASLPIATLA TIIVAVLSLVD KTP  IW YSKADFAAMAATI VTLL GVEPGV+AGVGLSLALFLWR+SRPHAAIVGRVPE+EHFRNV RHKVFTDPR
Sbjct:  257 TVPLFDAELWQRLAVPALLLSIIGFVESVSVAQTLAAKKRQRIVPDQELIGLGAANVAAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAVGILLAALFLTPLLASLPIATLAGTIIVAVLSLVDFKTPRAIWHYSKADFAAMAATIAVTLLIGVEPGVMAGVGLSLALFLWRASRPHAAIVGRVPETEHFRNVKRHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A0S3EV06_9SPHN (Sulfate:proton symporter n=4 Tax=Sphingomonadales TaxID=204457 RepID=A0A0S3EV06_9SPHN)

HSP 1 Score: 333 bits (854), Expect = 4.450e-109
Identity = 179/205 (87.32%), Postives = 192/205 (93.66%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDP 615
            +VPL D  LW+ LAIPALLLSIIGFVESVSV QTLAAK+RQRIDPDQELIGLG AN++A+FSGGYPVTGGFARSVVNFDAGAETPAAGAFTA+GIA+AALFLTPLL +LP+ATLAATIIVAVLSLVDLKTP TIWRYS+ADFAAMAATI VTLL GVEPGVIAGVGLSLAL+LWRSSRPHAAIVGRVPE+ HFRNV RHKV TDP
Sbjct:  258 TVPLFDPRLWQQLAIPALLLSIIGFVESVSVAQTLAAKKRQRIDPDQELIGLGAANVAASFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAVGIAIAALFLTPLLYALPLATLAATIIVAVLSLVDLKTPRTIWRYSRADFAAMAATIAVTLLLGVEPGVIAGVGLSLALYLWRSSRPHAAIVGRVPETGHFRNVKRHKVLTDP 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A0N1LNK8_9SPHN (Sulfate:proton symporter n=2 Tax=unclassified Novosphingobium TaxID=2644732 RepID=A0A0N1LNK8_9SPHN)

HSP 1 Score: 333 bits (853), Expect = 6.470e-109
Identity = 179/206 (86.89%), Postives = 190/206 (92.23%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            SVPL D  LW+ LA+PALLLSIIGFVESVSV QTLAAK+RQR+ PDQELIGLG AN++A+F+GGYPVTGGFARSVVNFDAGAETPAAGAFTAIGI +AALFLTPLLASLPIATLAATIIVAVLSLVD KTP  +WRYSKADFAAM ATI VTLL GVEPGVIAGV LSLALFLWRSSRPHAAIVGRVPE+EHFRNV RHKVFTDPR
Sbjct:  258 SVPLFDAGLWQRLAVPALLLSIIGFVESVSVAQTLAAKKRQRVVPDQELIGLGAANVAASFTGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGILIAALFLTPLLASLPIATLAATIIVAVLSLVDFKTPQAVWRYSKADFAAMLATIAVTLLVGVEPGVIAGVALSLALFLWRSSRPHAAIVGRVPETEHFRNVKRHKVFTDPR 463
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A6I6L4B1_9SPHN (Sulfate permease n=1 Tax=Sphingorhabdus lacus TaxID=392610 RepID=A0A6I6L4B1_9SPHN)

HSP 1 Score: 332 bits (852), Expect = 8.900e-109
Identity = 180/206 (87.38%), Postives = 189/206 (91.75%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            +VP+ D ELW+ L +PALLLSIIGFVESVSV QTLAAK+RQRI PDQELIGLG AN++AAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGI LAALFLTPLLASLPIATLA TIIVAVLSLVD KTP  IWRYSK DF AMAATI VTLL GVEPGVIAGVGLSLALFLWR+SRPHAAIVGRVPE+EHFRNV RHKVFTDPR
Sbjct:  257 TVPVFDPELWQRLVVPALLLSIIGFVESVSVAQTLAAKKRQRIVPDQELIGLGAANVAAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGILLAALFLTPLLASLPIATLAGTIIVAVLSLVDFKTPRAIWRYSKPDFMAMAATIAVTLLVGVEPGVIAGVGLSLALFLWRASRPHAAIVGRVPETEHFRNVKRHKVFTDPR 462
[Close]
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Match: A0A1B3N7R8_9SPHN (Sulfate permease family protein n=5 Tax=Blastomonas TaxID=150203 RepID=A0A1B3N7R8_9SPHN)

HSP 1 Score: 332 bits (851), Expect = 1.400e-108
Identity = 179/206 (86.89%), Postives = 192/206 (93.20%), Query Frame = 1 
Query:    1 SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELIGLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAALFLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIGVTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHKVFTDPR 618
            +VPL D ELW+ LAIPALLLS+IGFVESVSV QTLAAK+RQRI+PDQELIGLG AN++AAF+GGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIA+AALFLTP LASLPIATLAATIIVAVLSLVD KTP  IW YSK DFAAMAAT+ VTLLAGVEPGVIAGVGLSLALFLWR+SRPHAAIVGRVPE+EHFRNV RH+V TDPR
Sbjct:  261 TVPLFDTELWQRLAIPALLLSVIGFVESVSVAQTLAAKKRQRINPDQELIGLGAANVAAAFTGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIAIAALFLTPFLASLPIATLAATIIVAVLSLVDFKTPQHIWHYSKPDFAAMAATVLVTLLAGVEPGVIAGVGLSLALFLWRASRPHAAIVGRVPETEHFRNVRRHQVLTDPR 466
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107220.1552.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127MBQ5_9SPHN4.530e-12095.15Sodium-independent anion transporter n=6 Tax=Sphin... [more]
UPI000D6947895.140e-11993.69sulfate permease n=1 Tax=Sphingorhabdus sp. EL138 ... [more]
A0A220W7Y3_9SPHN1.030e-11894.66Putative sulfate transporter n=2 Tax=Sphingomonada... [more]
A0A1L3J8W8_9SPHN1.230e-11186.89Sodium-independent anion transporter n=2 Tax=Sphin... [more]
A0A0C5XQ13_SPHYB2.400e-11188.35Sulfate:proton symporter n=1 Tax=Sphingobium sp. (... [more]
A0A3R8RRY3_9SPHN3.940e-11087.86Sulfate permease n=2 Tax=Sphingomonadales TaxID=20... [more]
A0A0S3EV06_9SPHN4.450e-10987.32Sulfate:proton symporter n=4 Tax=Sphingomonadales ... [more]
A0A0N1LNK8_9SPHN6.470e-10986.89Sulfate:proton symporter n=2 Tax=unclassified Novo... [more]
A0A6I6L4B1_9SPHN8.900e-10987.38Sulfate permease n=1 Tax=Sphingorhabdus lacus TaxI... [more]
A0A1B3N7R8_9SPHN1.400e-10886.89Sulfate permease family protein n=5 Tax=Blastomona... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107220contigM-pyrifera_M_contig107220:3..620 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score332.4
Seed ortholog evalue1.5e-88
Seed eggNOG ortholog1248760.ANFZ01000018_gene632
Preferred namesulP
KEGG koko:K03321
KEGG TC2.A.53.3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.COG0659 Sulfate permease and related transporters (MFS superfamily)
EggNOG OGs1MWDF@1224,2K3UQ@204457,2TT0G@28211,COG0659@1,COG0659@2
COG Functional cat.P
Best tax levelSphingomonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons1
Model size618
Cds size618
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815582.540082-CDS-M-pyrifera_M_contig107220:2..6201622815582.540082-CDS-M-pyrifera_M_contig107220:2..620Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107220 3..620 -
1692277474.0935395-CDS-M-pyrifera_M_contig107220:2..6201692277474.0935395-CDS-M-pyrifera_M_contig107220:2..620Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107220 3..620 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107220.1552.1prot_M-pyrifera_M_contig107220.1552.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107220 3..620 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107220.1552.1

>prot_M-pyrifera_M_contig107220.1552.1 ID=prot_M-pyrifera_M_contig107220.1552.1|Name=mRNA_M-pyrifera_M_contig107220.1552.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=206bp
SVPLIDLELWKTLAIPALLLSIIGFVESVSVGQTLAAKRRQRIDPDQELI
GLGTANLSAAFSGGYPVTGGFARSVVNFDAGAETPAAGAFTAIGIALAAL
FLTPLLASLPIATLAATIIVAVLSLVDLKTPLTIWRYSKADFAAMAATIG
VTLLAGVEPGVIAGVGLSLALFLWRSSRPHAAIVGRVPESEHFRNVDRHK
VFTDPR
back to top

mRNA from alignment at M-pyrifera_M_contig107220:3..620-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107220.1552.1 ID=mRNA_M-pyrifera_M_contig107220.1552.1|Name=mRNA_M-pyrifera_M_contig107220.1552.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107220:3..620- (Macrocystis pyrifera P11B4 male)
TCGGTGCCGCTCATCGATCTCGAACTGTGGAAGACGCTGGCGATACCGGC
ATTGCTGCTCAGCATCATCGGATTTGTCGAATCCGTATCTGTGGGCCAGA
CGCTTGCGGCCAAGCGCCGTCAGCGGATTGATCCGGATCAGGAGTTGATC
GGCCTCGGTACTGCGAATCTGTCAGCAGCCTTCTCCGGCGGCTATCCGGT
CACCGGCGGATTTGCGCGGTCGGTCGTCAATTTCGATGCCGGTGCAGAAA
CCCCTGCCGCCGGCGCCTTCACCGCGATCGGAATCGCCCTGGCGGCGCTT
TTCTTGACACCGCTGCTGGCTTCCCTTCCCATCGCCACGCTGGCCGCGAC
CATCATTGTCGCCGTGCTCAGCCTCGTCGATCTCAAGACCCCGCTAACAA
TCTGGCGCTATTCCAAAGCCGATTTCGCGGCAATGGCGGCCACCATTGGC
GTGACGCTGCTCGCCGGTGTCGAACCGGGCGTGATCGCGGGTGTCGGGTT
GAGTCTCGCCCTGTTCCTGTGGCGCAGTTCGCGGCCCCACGCGGCGATTG
TCGGTCGGGTCCCCGAATCCGAGCATTTTCGCAATGTCGACCGGCACAAG
GTTTTCACCGATCCCCGC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig107220:3..620-

>mRNA_M-pyrifera_M_contig107220.1552.1 ID=mRNA_M-pyrifera_M_contig107220.1552.1|Name=mRNA_M-pyrifera_M_contig107220.1552.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1236bp|location=Sequence derived from alignment at M-pyrifera_M_contig107220:3..620- (Macrocystis pyrifera P11B4 male)
TCGGTGCCGCTCATCGATCTCGAACTGTGGAAGACGCTGGCGATACCGGC
ATTGCTGCTCAGCATCATCGGATTTGTCGAATCCGTATCTGTGGGCCAGA
CGCTTGCGGCCAAGCGCCGTCAGCGGATTGATCCGGATCAGGAGTTGATC
GGCCTCGGTACTGCGAATCTGTCAGCAGCCTTCTCCGGCGGCTATCCGGT
CACCGGCGGATTTGCGCGGTCGGTCGTCAATTTCGATGCCGGTGCAGAAA
CCCCTGCCGCCGGCGCCTTCACCGCGATCGGAATCGCCCTGGCGGCGCTT
TTCTTGACACCGCTGCTGGCTTCCCTTCCCATCGCCACGCTGGCCGCGAC
CATCATTGTCGCCGTGCTCAGCCTCGTCGATCTCAAGACCCCGCTAACAA
TCTGGCGCTATTCCAAAGCCGATTTCGCGGCAATGGCGGCCACCATTGGC
GTGACGCTGCTCGCCGGTGTCGAACCGGGCGTGATCGCGGGTGTCGGGTT
GAGTCTCGCCCTGTTCCTGTGGCGCAGTTCGCGGCCCCACGCGGCGATTG
TCGGTCGGGTCCCCGAATCCGAGCATTTTCGCAATGTCGACCGGCACAAG
GTTTTCACCGATCCCCGCTCGGTGCCGCTCATCGATCTCGAACTGTGGAA
GACGCTGGCGATACCGGCATTGCTGCTCAGCATCATCGGATTTGTCGAAT
CCGTATCTGTGGGCCAGACGCTTGCGGCCAAGCGCCGTCAGCGGATTGAT
CCGGATCAGGAGTTGATCGGCCTCGGTACTGCGAATCTGTCAGCAGCCTT
CTCCGGCGGCTATCCGGTCACCGGCGGATTTGCGCGGTCGGTCGTCAATT
TCGATGCCGGTGCAGAAACCCCTGCCGCCGGCGCCTTCACCGCGATCGGA
ATCGCCCTGGCGGCGCTTTTCTTGACACCGCTGCTGGCTTCCCTTCCCAT
CGCCACGCTGGCCGCGACCATCATTGTCGCCGTGCTCAGCCTCGTCGATC
TCAAGACCCCGCTAACAATCTGGCGCTATTCCAAAGCCGATTTCGCGGCA
ATGGCGGCCACCATTGGCGTGACGCTGCTCGCCGGTGTCGAACCGGGCGT
GATCGCGGGTGTCGGGTTGAGTCTCGCCCTGTTCCTGTGGCGCAGTTCGC
GGCCCCACGCGGCGATTGTCGGTCGGGTCCCCGAATCCGAGCATTTTCGC
AATGTCGACCGGCACAAGGTTTTCACCGATCCCCGC
back to top