mRNA_M-pyrifera_M_contig107218.1550.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A7X5WQI1_9ACTN (DUF3499 family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQI1_9ACTN) HSP 1 Score: 121 bits (304), Expect = 1.460e-34 Identity = 57/76 (75.00%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRAPAP-VQRLRYAG 237 VNRRCARPGCG A TLSYAYAQRTVWLDDL ED PANHDLC H DRT+PP+GWELRDRR + RLRYAG Sbjct: 4 VNRRCARPGCGSSATVTLSYAYAQRTVWLDDLSQEDHPANHDLCDAHGDRTRPPRGWELRDRRGATEWLPRLRYAG 79
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A358A2C4_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A2C4_9ACTN) HSP 1 Score: 122 bits (305), Expect = 1.840e-34 Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 1 Query: 1 TVWSVNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRAPA 210 T S++RRCARPGCG+PA TTLSY YAQR VWLDDLH + SPANHDLC HADRTQPPKGWELRDRR A Sbjct: 20 TFASMSRRCARPGCGQPADTTLSYDYAQRLVWLDDLHLDKSPANHDLCRRHADRTQPPKGWELRDRRTAA 89
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A2D6UAP9_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6UAP9_9ACTN) HSP 1 Score: 118 bits (296), Expect = 2.230e-33 Identity = 52/66 (78.79%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRAPA 210 ++RRCARPGCG+PA TTLSY YA+R VWLDDLH ++SPANHDLC HADRTQPPKGWELRDRR+ A Sbjct: 1 MSRRCARPGCGQPADTTLSYDYARRLVWLDDLHFDNSPANHDLCRRHADRTQPPKGWELRDRRSAA 66
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A7K1ZCQ6_9ACTN (DUF3499 family protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZCQ6_9ACTN) HSP 1 Score: 114 bits (285), Expect = 2.060e-31 Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 1 Query: 1 TVWSVNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRA 204 TV +VNRRCARPGC AATTLS+ YAQ+ VW+DDLH EDSPANHDLC HADRT+PP+GW+L DRR+ Sbjct: 6 TVPNVNRRCARPGCRHLAATTLSFLYAQQIVWIDDLHVEDSPANHDLCTIHADRTRPPRGWDLDDRRS 73
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A431IC85_9ACTN (DUF3499 family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IC85_9ACTN) HSP 1 Score: 100 bits (250), Expect = 5.680e-26 Identity = 46/68 (67.65%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 1 TVWSVNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRA 204 TV +V+R CARPGCGRPA TLSYAYA+ VWL+DL AED P HDLC HAD + P+GWELRD RA Sbjct: 27 TVPAVSRSCARPGCGRPAVATLSYAYAEGVVWLEDLAAEDHPMVHDLCLLHADTVRVPRGWELRDGRA 94
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A538DNH8_9ACTN (DUF3499 family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DNH8_9ACTN) HSP 1 Score: 99.4 bits (246), Expect = 1.140e-25 Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRR 201 V+R CARPGC P+ATTLSY YA RTVWL+DLH + PANHDLC HA R PP GWEL DRR Sbjct: 4 VHRSCARPGCSSPSATTLSYDYASRTVWLEDLHPDAHPANHDLCPRHAARMTPPNGWELVDRR 66
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: UPI001D12DA57 (DUF3499 domain-containing protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D12DA57) HSP 1 Score: 96.7 bits (239), Expect = 1.190e-24 Identity = 43/63 (68.25%), Postives = 47/63 (74.60%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRR 201 ++R CARPGCGRPA TLSYAYA VWL+DL AED P HDLCA HAD + P GWELRD R Sbjct: 1 MSRSCARPGCGRPAVATLSYAYADGVVWLEDLAAEDHPMVHDLCAQHADGVRVPNGWELRDER 63
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A7Y2DET8_9ACTN (DUF3499 family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DET8_9ACTN) HSP 1 Score: 84.7 bits (208), Expect = 6.270e-20 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRA 204 + R CARP C PAA T++++Y ++TVWLD L E +P +HDLC HADRT PP GW L DRRA Sbjct: 1 MERPCARPTCTNPAAATMTFSYTEQTVWLDVLTVEVNPMDHDLCLMHADRTTPPVGWMLDDRRA 64
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A7X7D3P1_9ACTN (DUF3499 family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D3P1_9ACTN) HSP 1 Score: 84.3 bits (207), Expect = 8.440e-20 Identity = 37/64 (57.81%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 13 VNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRRA 204 + R CARPGCG A TLSY Y TVWL+ L E P HDLC HA RT PP+GW+L DRR+ Sbjct: 1 MRRSCARPGCGEAATVTLSYDYGGATVWLESLAPEGHPMTHDLCDRHATRTNPPRGWQLVDRRS 64
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Match: A0A8J3ESW1_9ACTN (Uncharacterized protein n=2 Tax=Egicoccus halophilus TaxID=1670830 RepID=A0A8J3ESW1_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 2.090e-19 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1 Query: 10 SVNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPHADRTQPPKGWELRDRR 201 + R C+RP C PA+ TL++ YA+R W+ DL A P ++DLCAPHA+RTQPP GW+LRDRR Sbjct: 37 AAERACSRPSCPAPASATLTFNYAEREAWITDLAASRLPQSYDLCAPHAERTQPPHGWDLRDRR 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107218.1550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107218.1550.1 >prot_M-pyrifera_M_contig107218.1550.1 ID=prot_M-pyrifera_M_contig107218.1550.1|Name=mRNA_M-pyrifera_M_contig107218.1550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp TVWSVNRRCARPGCGRPAATTLSYAYAQRTVWLDDLHAEDSPANHDLCAPback to top mRNA from alignment at M-pyrifera_M_contig107218:93..332- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107218.1550.1 ID=mRNA_M-pyrifera_M_contig107218.1550.1|Name=mRNA_M-pyrifera_M_contig107218.1550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig107218:93..332- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107218:93..332- >mRNA_M-pyrifera_M_contig107218.1550.1 ID=mRNA_M-pyrifera_M_contig107218.1550.1|Name=mRNA_M-pyrifera_M_contig107218.1550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig107218:93..332- (Macrocystis pyrifera P11B4 male)back to top |