mRNA_M-pyrifera_M_contig107171.1534.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A225W9S3_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W9S3_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.250e-10 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 +++N +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L KYE + RF+GI Sbjct: 825 RIVNQLYRDNYETMVSTLQYGNRRMEFSEFIYDWHIRKYGLKTLAQRHLLKLIQSLRKYEKKSFLCQLCLRFMGI 899
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A833X0C8_PHYIN (EF-hand domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X0C8_PHYIN) HSP 1 Score: 64.3 bits (155), Expect = 5.950e-10 Identity = 28/81 (34.57%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGINCKQVP 243 +++N +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L K+E + RF+GI P Sbjct: 894 RIVNQLYRDNYEGMVSTLQYGNRRMEFSEFIYDWHIRKYGLKTLAQRHLLKLIQSLRKHEKKAFQCQLCLRFMGIQISISP 974
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A662WS17_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WS17_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 8.120e-10 Identity = 28/76 (36.84%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGIN 228 +V+N +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L K+E + RF+GI+ Sbjct: 837 RVVNQLYRDNFEGLVASLQYGNRRMEFSEFIYDWHIRKYGLKALAQRHLLKLIQSLRKHEKKVFQCQLCLRFMGIH 912
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: D8U1W7_VOLCA (EF-hand domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U1W7_VOLCA) HSP 1 Score: 63.5 bits (153), Expect = 1.110e-9 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 4 VINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 VI+ IY DK ADS+ DR+ RQ F DWH+T++GLR LAE HL ++ ++ ++ + VR F +F G+ Sbjct: 698 VISAIYYDKLQADSVSDRECNPRQRLAEFAVDWHMTRFGLRNLAELHLLDLIASVRQHYKTSVRVRWFGQFTGL 771
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A8J4FH44_9CHLO (EF-hand domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FH44_9CHLO) HSP 1 Score: 62.8 bits (151), Expect = 2.070e-9 Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 4 VINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 I+ IY DK AD++ DR+G RQ F DWH+T++GLR LAE HL ++ ++ ++ + +R F +F G+ Sbjct: 643 AISAIYYDKMLADAVSDREGNPRQRLADFAVDWHMTRFGLRNLAELHLLDLIASVRQHYKASVRIRWFGQFTGL 716
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: W2QEX3_PHYPN (EF-hand domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QEX3_PHYPN) HSP 1 Score: 62.8 bits (151), Expect = 2.070e-9 Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 +++N +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L K+E RF+GI Sbjct: 953 RIVNQLYRDNYEGMVSTLQYGNRRMEFSEFIYDWHIRKYGLKTLAQRHLLKLIQSLRKHEKKVFQCHLCLRFMGI 1027
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A8J4EP58_9CHLO (EF-hand domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EP58_9CHLO) HSP 1 Score: 62.4 bits (150), Expect = 2.830e-9 Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 1 Query: 4 VINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 I+ IY DK AD++ DR+G RQ F DWH+T++GLR LAE HL ++ ++ ++ + +R F +F G+ Sbjct: 642 AISAIYYDKMLADAVSDREGNPRQRLADFAVDWHMTRFGLRNLAELHLLDLIGSVRQHYKTSVRIRWFGQFTGL 715
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A6A4FMF3_9STRA (EF-hand domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FMF3_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.220e-9 Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 ++IN +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L +E + RF+GI Sbjct: 960 RIINQLYRDNYEGVVSTLQYGNRRMEFSEFIYDWHIRKYGLKALAQRHLLKLIQSLRTHEKKVFQCQLCLRFMGI 1034
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A6A3T116_9STRA (EF-hand domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3T116_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 9.710e-9 Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGI 225 ++IN +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L +E + RF+GI Sbjct: 419 RIINQLYRDNYEGMVSTLQYGSRRMEFSEFIYDWHIRKYGLKALAQRHLLKLIQSLRTHEKKVFQCQLCLRFMGI 493
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Match: A0A8J5M8P5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M8P5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.800e-8 Identity = 25/89 (28.09%), Postives = 49/89 (55.06%), Query Frame = 1 Query: 1 KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLARMVRTLHKYEDSDGTVRAFCRFLGINCKQVPLDDLNVYL 267 +++N +YRD + G R F F+YDWH+ KYGL+ LA++HL +++++L K+E + + L + ++++ Y+ Sbjct: 395 RIVNQLYRDNYEGMVSTLQYGNRRMEFSEFIYDWHIRKYGLKTLAQRHLLKLIQSLRKHEKKSFQCQLYASHLRYRLCKKRFENVSEYM 483 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107171.1534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107171.1534.1 >prot_M-pyrifera_M_contig107171.1534.1 ID=prot_M-pyrifera_M_contig107171.1534.1|Name=mRNA_M-pyrifera_M_contig107171.1534.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp KVINHIYRDKASADSMDDRQGRDRQPFHAFVYDWHLTKYGLRRLAEKHLAback to top mRNA from alignment at M-pyrifera_M_contig107171:174..455+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107171.1534.1 ID=mRNA_M-pyrifera_M_contig107171.1534.1|Name=mRNA_M-pyrifera_M_contig107171.1534.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=282bp|location=Sequence derived from alignment at M-pyrifera_M_contig107171:174..455+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107171:174..455+ >mRNA_M-pyrifera_M_contig107171.1534.1 ID=mRNA_M-pyrifera_M_contig107171.1534.1|Name=mRNA_M-pyrifera_M_contig107171.1534.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=564bp|location=Sequence derived from alignment at M-pyrifera_M_contig107171:174..455+ (Macrocystis pyrifera P11B4 male)back to top |