mRNA_M-pyrifera_M_contig107160.1531.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2E7C1N6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=8 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C1N6_9GAMM) HSP 1 Score: 367 bits (942), Expect = 8.090e-121 Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFFAMNR NRGGSRP+ VPPQQ+KKLGVLGAGMMGQGIAYVAAMAGI VVLKD+SEDAA+RGKAYSERLLDKRVQRGKLTE+KKQA LDLILPT NDDLAGCDLIVEAVFENM LKH++TRELEGQLA GVWGSNTS+LPITQLAEASA+ ANFIGIHFFSPVDKMPLVEIICGAETS+ETLAKAYDFARQIRKTPIVVNDSL Sbjct: 294 TFFFAMNRVNRGGSRPEGVPPQQVKKLGVLGAGMMGQGIAYVAAMAGIQVVLKDISEDAANRGKAYSERLLDKRVQRGKLTEDKKQAILDLILPTAKNDDLAGCDLIVEAVFENMGLKHQMTRELEGQLAPGGVWGSNTSTLPITQLAEASANRANFIGIHFFSPVDKMPLVEIICGAETSEETLAKAYDFARQIRKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2N5Y2T4_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y2T4_9GAMM) HSP 1 Score: 327 bits (838), Expect = 2.910e-105 Identity = 163/206 (79.13%), Postives = 188/206 (91.26%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFFAMNR NRGGSRP DVP + ++K+G+LGAGMMGQGIAYV+A+AGI VVLKD+S +AA+RGKAYSE+LL KRVQRGK+TEEKKQ L+LILPT +NDDLAGCDLIVEAVFEN++LK ITRE E QLAADG+WGSNTS+LPI++LA ASA+P FIGIHFFSPVDKMPLVEIICG +TS+ETLA+AYD+ARQIRKTPIVVNDSL Sbjct: 294 TFFFAMNRINRGGSRPADVPSRSVEKVGILGAGMMGQGIAYVSALAGIKVVLKDMSVEAAARGKAYSEQLLAKRVQRGKMTEEKKQQILELILPTDSNDDLAGCDLIVEAVFENLALKQSITRETEPQLAADGIWGSNTSTLPISELATASAAPEKFIGIHFFSPVDKMPLVEIICGDKTSEETLARAYDYARQIRKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: UPI0019DD3C6B (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019DD3C6B) HSP 1 Score: 317 bits (811), Expect = 2.610e-101 Identity = 156/206 (75.73%), Postives = 180/206 (87.38%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFFAMN+ N G SRPQDV P +KK+G+LGAGMMGQGIAYV+AMAGI VVLKD+S++AA +GKAY+E LLDKRV RG++T+EKK L LI PT NN DL GCDLI+EAVFENM LK+KITR EG LA +GVWGSNTS+LPIT+LAEAS+ P NFIGIHFFSPVDKMPLVEIICG +TSDETLAKA+D++RQIRKTPIV+NDSL Sbjct: 288 TFFFAMNKVNGGASRPQDVEPTSVKKVGILGAGMMGQGIAYVSAMAGIEVVLKDISQEAAEKGKAYTETLLDKRVSRGRMTQEKKADILGLIKPTENNADLQGCDLIIEAVFENMELKNKITRSTEGYLAENGVWGSNTSALPITRLAEASSKPENFIGIHFFSPVDKMPLVEIICGEKTSDETLAKAFDYSRQIRKTPIVINDSL 493
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5C8ZXW2_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZXW2_9GAMM) HSP 1 Score: 306 bits (783), Expect = 4.520e-97 Identity = 152/206 (73.79%), Postives = 179/206 (86.89%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF MNR N G SRP + P+++KK+GVLGAGMMGQGIAYV+AMAGI VVLKD+S +AA +GKAYSE LL KRV+RGK++EE+K L +I P+ +N DL GCDLI+EAVFEN++LKHKITRE+E LA +GVWGSNTS+LPITQLAEAS P NFIGIHFFSPVDKMPLVEIICG +TSDETLA+A+D+A+QIRKTPIVVNDSL Sbjct: 294 TFFFGMNRLNGGASRPDGIEPRKVKKVGVLGAGMMGQGIAYVSAMAGIEVVLKDISAEAAEKGKAYSEGLLAKRVKRGKMSEEQKADILGMIKPSADNADLQGCDLIIEAVFENIALKHKITREIEPCLAENGVWGSNTSTLPITQLAEASEKPENFIGIHFFSPVDKMPLVEIICGEKTSDETLARAFDYAKQIRKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5C8ZWK8_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZWK8_9GAMM) HSP 1 Score: 305 bits (782), Expect = 6.520e-97 Identity = 151/206 (73.30%), Postives = 177/206 (85.92%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF MNR N G SRP V PQ++KK+G+LGAGMMGQGIAY +AMAGI VVLKD+S +AA +GKAY+E LL KRV +GK++EE+K LDLI PT +N DL GCDLI+EAVFEN+ LKHKIT+E E LA +GVWGSNTS+LPITQLAEAS+ P NFIGIHFFSPVDKMPL+EIICG +TSDETLA+A+D+A+QIRKTPIVVNDSL Sbjct: 295 TFFFGMNRLNGGASRPAGVEPQKVKKVGILGAGMMGQGIAYSSAMAGIEVVLKDISAEAAEKGKAYTEGLLAKRVSKGKMSEEQKADILDLIKPTADNADLQGCDLIIEAVFENIELKHKITKETESFLAENGVWGSNTSTLPITQLAEASSKPENFIGIHFFSPVDKMPLIEIICGEKTSDETLARAFDYAKQIRKTPIVVNDSL 500
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2D4S9U7_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S9U7_9GAMM) HSP 1 Score: 305 bits (780), Expect = 1.180e-96 Identity = 153/206 (74.27%), Postives = 178/206 (86.41%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF +NR N G SRP+DVP +Q+KKLG+LGAGMMGQGIAYV+A AG++VVLKD+S +AA +GKAYSE LLDK ++RG+ TE+KKQA LD I PT +NDDLAGCDLI+EAVFEN+ LK+KI RE E QLA GVWGSNTS+LPITQLAEAS P NFIGIHFFSPVDKMPLVEII G +TSDETLA A+D+ +QI+KTPIVVNDSL Sbjct: 292 TFFFQLNRINSGASRPKDVPRKQVKKLGILGAGMMGQGIAYVSAKAGMDVVLKDISVEAAEKGKAYSETLLDKAIKRGRSTEDKKQALLDRIHPTASNDDLAGCDLIIEAVFENIELKNKILRETESQLADGGVWGSNTSTLPITQLAEASEKPDNFIGIHFFSPVDKMPLVEIIRGDKTSDETLALAFDYTQQIKKTPIVVNDSL 497
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5S9MZH9_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Zhongshania aliphaticivorans TaxID=1470434 RepID=A0A5S9MZH9_9GAMM) HSP 1 Score: 305 bits (780), Expect = 1.260e-96 Identity = 150/206 (72.82%), Postives = 174/206 (84.47%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF MN+ N G SRP+DVPPQ+ KKLGVLGAGMMGQGIAY +AMAGI V+LKD+S +AA +GKAYSE+LLDK + RG++TEEKK L LI PT N++DL GCDLI+EAVFEN+ LK+KIT E L+ DG+WGSNTS+LPITQLAE S+ P NFIGIHFFSPVDKMPLVEIICG +TSD LAKAYD+ +QIRKTPIVVNDSL Sbjct: 294 TFFFQMNKINGGASRPKDVPPQETKKLGVLGAGMMGQGIAYSSAMAGIEVILKDISVEAAEKGKAYSEKLLDKAISRGRMTEEKKAQVLALIKPTANDEDLQGCDLIIEAVFENIELKNKITASTEKYLSEDGIWGSNTSTLPITQLAEGSSKPDNFIGIHFFSPVDKMPLVEIICGEKTSDIALAKAYDYTKQIRKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A395JKG4_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Arenicella xantha TaxID=644221 RepID=A0A395JKG4_9GAMM) HSP 1 Score: 305 bits (780), Expect = 1.260e-96 Identity = 149/206 (72.33%), Postives = 178/206 (86.41%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF +N+ N G SRP+++ Q +K+G+LGAGMMGQG+AYV+AMAGI VVLKD+S +AA +GKAYS++LLDKRV RG++TEEK Q+ +DLILPT N+DL GCDLI+EAVFEN+ LKHKIT+E+E L+ DG WGSNTS+LPITQLAEASA P NFIGIHFFSPVDKMPLVEIICG +TSDE LAKA+D+ QIRKTPIVVNDSL Sbjct: 294 TFFFQLNQINGGASRPKNIEKQVTRKVGILGAGMMGQGVAYVSAMAGIEVVLKDISLEAAEKGKAYSQKLLDKRVTRGQMTEEKAQSVMDLILPTDKNEDLNGCDLIIEAVFENIGLKHKITKEIEPCLSEDGFWGSNTSTLPITQLAEASAKPENFIGIHFFSPVDKMPLVEIICGEKTSDEALAKAFDYTMQIRKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: F3L5A1_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Aequoribacter fuscus TaxID=2518989 RepID=F3L5A1_9GAMM) HSP 1 Score: 304 bits (778), Expect = 2.130e-96 Identity = 150/206 (72.82%), Postives = 176/206 (85.44%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF +N+ N G SRP+ V + +K+GVLGAGMMGQGIAY +AMAGI VVLKD+S +AA +GKAY+E+LL KRV +G++TEEKKQA LDLILPT +N+DL GCDLI+EAVFENM LKH+IT ELEG L DGVWGSNTS+LPITQLA+ S+ P NFIGIHFFSPVDKMPLVEIICG +TSDE LAKA+D+ QI+KTPIVVNDSL Sbjct: 294 TFFFGLNKINGGASRPKGVEKRPTQKVGVLGAGMMGQGIAYSSAMAGIQVVLKDISVEAAEKGKAYTEKLLAKRVAKGRMTEEKKQAVLDLILPTASNEDLQGCDLIIEAVFENMKLKHQITAELEGYLTEDGVWGSNTSTLPITQLADGSSKPENFIGIHFFSPVDKMPLVEIICGEKTSDEALAKAFDYTVQIKKTPIVVNDSL 499
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2N5WZQ6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Pseudohalioglobus TaxID=2875235 RepID=A0A2N5WZQ6_9GAMM) HSP 1 Score: 303 bits (775), Expect = 6.990e-96 Identity = 147/206 (71.36%), Postives = 175/206 (84.95%), Query Frame = 1 Query: 1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618 TFFF MN+ N G SRPQDV PQQ KK+G+LGAGMMGQGIAYV+AMAGI VVLKD+S++AA +GKAYSE+LL KRV+RG++ + K L LI PT + DL GCDL++EAVFENM LKH+IT+E++G +A G+WGSNTS+LPITQLAEA+ +P NFIGIHFFSPVDKMPLVEIICG +TSD LAKA+D+ RQIRKTPIVVNDSL Sbjct: 294 TFFFGMNKVNGGASRPQDVEPQQTKKVGILGAGMMGQGIAYVSAMAGIEVVLKDISQEAADKGKAYSEKLLAKRVERGRMDQAKMDGILGLIKPTADAADLQGCDLVIEAVFENMELKHQITKEMQGYMAEGGIWGSNTSTLPITQLAEAADNPENFIGIHFFSPVDKMPLVEIICGEQTSDVALAKAFDYTRQIRKTPIVVNDSL 499 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107160.1531.1 >prot_M-pyrifera_M_contig107160.1531.1 ID=prot_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp MNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVback to top mRNA from alignment at M-pyrifera_M_contig107160:3..620- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107160.1531.1 ID=mRNA_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107160:3..620- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107160:3..620- >mRNA_M-pyrifera_M_contig107160.1531.1 ID=mRNA_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig107160:3..620- (Macrocystis pyrifera P11B4 male)back to top |