mRNA_M-pyrifera_M_contig107160.1531.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig107160.1531.1
Unique NamemRNA_M-pyrifera_M_contig107160.1531.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2E7C1N6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=8 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C1N6_9GAMM)

HSP 1 Score: 367 bits (942), Expect = 8.090e-121
Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFFAMNR NRGGSRP+ VPPQQ+KKLGVLGAGMMGQGIAYVAAMAGI VVLKD+SEDAA+RGKAYSERLLDKRVQRGKLTE+KKQA LDLILPT  NDDLAGCDLIVEAVFENM LKH++TRELEGQLA  GVWGSNTS+LPITQLAEASA+ ANFIGIHFFSPVDKMPLVEIICGAETS+ETLAKAYDFARQIRKTPIVVNDSL
Sbjct:  294 TFFFAMNRVNRGGSRPEGVPPQQVKKLGVLGAGMMGQGIAYVAAMAGIQVVLKDISEDAANRGKAYSERLLDKRVQRGKLTEDKKQAILDLILPTAKNDDLAGCDLIVEAVFENMGLKHQMTRELEGQLAPGGVWGSNTSTLPITQLAEASANRANFIGIHFFSPVDKMPLVEIICGAETSEETLAKAYDFARQIRKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2N5Y2T4_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y2T4_9GAMM)

HSP 1 Score: 327 bits (838), Expect = 2.910e-105
Identity = 163/206 (79.13%), Postives = 188/206 (91.26%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFFAMNR NRGGSRP DVP + ++K+G+LGAGMMGQGIAYV+A+AGI VVLKD+S +AA+RGKAYSE+LL KRVQRGK+TEEKKQ  L+LILPT +NDDLAGCDLIVEAVFEN++LK  ITRE E QLAADG+WGSNTS+LPI++LA ASA+P  FIGIHFFSPVDKMPLVEIICG +TS+ETLA+AYD+ARQIRKTPIVVNDSL
Sbjct:  294 TFFFAMNRINRGGSRPADVPSRSVEKVGILGAGMMGQGIAYVSALAGIKVVLKDMSVEAAARGKAYSEQLLAKRVQRGKMTEEKKQQILELILPTDSNDDLAGCDLIVEAVFENLALKQSITRETEPQLAADGIWGSNTSTLPISELATASAAPEKFIGIHFFSPVDKMPLVEIICGDKTSEETLARAYDYARQIRKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: UPI0019DD3C6B (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019DD3C6B)

HSP 1 Score: 317 bits (811), Expect = 2.610e-101
Identity = 156/206 (75.73%), Postives = 180/206 (87.38%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFFAMN+ N G SRPQDV P  +KK+G+LGAGMMGQGIAYV+AMAGI VVLKD+S++AA +GKAY+E LLDKRV RG++T+EKK   L LI PT NN DL GCDLI+EAVFENM LK+KITR  EG LA +GVWGSNTS+LPIT+LAEAS+ P NFIGIHFFSPVDKMPLVEIICG +TSDETLAKA+D++RQIRKTPIV+NDSL
Sbjct:  288 TFFFAMNKVNGGASRPQDVEPTSVKKVGILGAGMMGQGIAYVSAMAGIEVVLKDISQEAAEKGKAYTETLLDKRVSRGRMTQEKKADILGLIKPTENNADLQGCDLIIEAVFENMELKNKITRSTEGYLAENGVWGSNTSALPITRLAEASSKPENFIGIHFFSPVDKMPLVEIICGEKTSDETLAKAFDYSRQIRKTPIVINDSL 493          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5C8ZXW2_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C8ZXW2_9GAMM)

HSP 1 Score: 306 bits (783), Expect = 4.520e-97
Identity = 152/206 (73.79%), Postives = 179/206 (86.89%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF MNR N G SRP  + P+++KK+GVLGAGMMGQGIAYV+AMAGI VVLKD+S +AA +GKAYSE LL KRV+RGK++EE+K   L +I P+ +N DL GCDLI+EAVFEN++LKHKITRE+E  LA +GVWGSNTS+LPITQLAEAS  P NFIGIHFFSPVDKMPLVEIICG +TSDETLA+A+D+A+QIRKTPIVVNDSL
Sbjct:  294 TFFFGMNRLNGGASRPDGIEPRKVKKVGVLGAGMMGQGIAYVSAMAGIEVVLKDISAEAAEKGKAYSEGLLAKRVKRGKMSEEQKADILGMIKPSADNADLQGCDLIIEAVFENIALKHKITREIEPCLAENGVWGSNTSTLPITQLAEASEKPENFIGIHFFSPVDKMPLVEIICGEKTSDETLARAFDYAKQIRKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5C8ZWK8_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C8ZWK8_9GAMM)

HSP 1 Score: 305 bits (782), Expect = 6.520e-97
Identity = 151/206 (73.30%), Postives = 177/206 (85.92%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF MNR N G SRP  V PQ++KK+G+LGAGMMGQGIAY +AMAGI VVLKD+S +AA +GKAY+E LL KRV +GK++EE+K   LDLI PT +N DL GCDLI+EAVFEN+ LKHKIT+E E  LA +GVWGSNTS+LPITQLAEAS+ P NFIGIHFFSPVDKMPL+EIICG +TSDETLA+A+D+A+QIRKTPIVVNDSL
Sbjct:  295 TFFFGMNRLNGGASRPAGVEPQKVKKVGILGAGMMGQGIAYSSAMAGIEVVLKDISAEAAEKGKAYTEGLLAKRVSKGKMSEEQKADILDLIKPTADNADLQGCDLIIEAVFENIELKHKITKETESFLAENGVWGSNTSTLPITQLAEASSKPENFIGIHFFSPVDKMPLIEIICGEKTSDETLARAFDYAKQIRKTPIVVNDSL 500          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2D4S9U7_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S9U7_9GAMM)

HSP 1 Score: 305 bits (780), Expect = 1.180e-96
Identity = 153/206 (74.27%), Postives = 178/206 (86.41%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF +NR N G SRP+DVP +Q+KKLG+LGAGMMGQGIAYV+A AG++VVLKD+S +AA +GKAYSE LLDK ++RG+ TE+KKQA LD I PT +NDDLAGCDLI+EAVFEN+ LK+KI RE E QLA  GVWGSNTS+LPITQLAEAS  P NFIGIHFFSPVDKMPLVEII G +TSDETLA A+D+ +QI+KTPIVVNDSL
Sbjct:  292 TFFFQLNRINSGASRPKDVPRKQVKKLGILGAGMMGQGIAYVSAKAGMDVVLKDISVEAAEKGKAYSETLLDKAIKRGRSTEDKKQALLDRIHPTASNDDLAGCDLIIEAVFENIELKNKILRETESQLADGGVWGSNTSTLPITQLAEASEKPDNFIGIHFFSPVDKMPLVEIIRGDKTSDETLALAFDYTQQIKKTPIVVNDSL 497          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A5S9MZH9_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Zhongshania aliphaticivorans TaxID=1470434 RepID=A0A5S9MZH9_9GAMM)

HSP 1 Score: 305 bits (780), Expect = 1.260e-96
Identity = 150/206 (72.82%), Postives = 174/206 (84.47%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF MN+ N G SRP+DVPPQ+ KKLGVLGAGMMGQGIAY +AMAGI V+LKD+S +AA +GKAYSE+LLDK + RG++TEEKK   L LI PT N++DL GCDLI+EAVFEN+ LK+KIT   E  L+ DG+WGSNTS+LPITQLAE S+ P NFIGIHFFSPVDKMPLVEIICG +TSD  LAKAYD+ +QIRKTPIVVNDSL
Sbjct:  294 TFFFQMNKINGGASRPKDVPPQETKKLGVLGAGMMGQGIAYSSAMAGIEVILKDISVEAAEKGKAYSEKLLDKAISRGRMTEEKKAQVLALIKPTANDEDLQGCDLIIEAVFENIELKNKITASTEKYLSEDGIWGSNTSTLPITQLAEGSSKPDNFIGIHFFSPVDKMPLVEIICGEKTSDIALAKAYDYTKQIRKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A395JKG4_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Arenicella xantha TaxID=644221 RepID=A0A395JKG4_9GAMM)

HSP 1 Score: 305 bits (780), Expect = 1.260e-96
Identity = 149/206 (72.33%), Postives = 178/206 (86.41%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF +N+ N G SRP+++  Q  +K+G+LGAGMMGQG+AYV+AMAGI VVLKD+S +AA +GKAYS++LLDKRV RG++TEEK Q+ +DLILPT  N+DL GCDLI+EAVFEN+ LKHKIT+E+E  L+ DG WGSNTS+LPITQLAEASA P NFIGIHFFSPVDKMPLVEIICG +TSDE LAKA+D+  QIRKTPIVVNDSL
Sbjct:  294 TFFFQLNQINGGASRPKNIEKQVTRKVGILGAGMMGQGVAYVSAMAGIEVVLKDISLEAAEKGKAYSQKLLDKRVTRGQMTEEKAQSVMDLILPTDKNEDLNGCDLIIEAVFENIGLKHKITKEIEPCLSEDGFWGSNTSTLPITQLAEASAKPENFIGIHFFSPVDKMPLVEIICGEKTSDEALAKAFDYTMQIRKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: F3L5A1_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Aequoribacter fuscus TaxID=2518989 RepID=F3L5A1_9GAMM)

HSP 1 Score: 304 bits (778), Expect = 2.130e-96
Identity = 150/206 (72.82%), Postives = 176/206 (85.44%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF +N+ N G SRP+ V  +  +K+GVLGAGMMGQGIAY +AMAGI VVLKD+S +AA +GKAY+E+LL KRV +G++TEEKKQA LDLILPT +N+DL GCDLI+EAVFENM LKH+IT ELEG L  DGVWGSNTS+LPITQLA+ S+ P NFIGIHFFSPVDKMPLVEIICG +TSDE LAKA+D+  QI+KTPIVVNDSL
Sbjct:  294 TFFFGLNKINGGASRPKGVEKRPTQKVGVLGAGMMGQGIAYSSAMAGIQVVLKDISVEAAEKGKAYTEKLLAKRVAKGRMTEEKKQAVLDLILPTASNEDLQGCDLIIEAVFENMKLKHQITAELEGYLTEDGVWGSNTSTLPITQLADGSSKPENFIGIHFFSPVDKMPLVEIICGEKTSDEALAKAFDYTVQIKKTPIVVNDSL 499          
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Match: A0A2N5WZQ6_9GAMM (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Pseudohalioglobus TaxID=2875235 RepID=A0A2N5WZQ6_9GAMM)

HSP 1 Score: 303 bits (775), Expect = 6.990e-96
Identity = 147/206 (71.36%), Postives = 175/206 (84.95%), Query Frame = 1
Query:    1 TFFFAMNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDVSEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCDLIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPANFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDSL 618
            TFFF MN+ N G SRPQDV PQQ KK+G+LGAGMMGQGIAYV+AMAGI VVLKD+S++AA +GKAYSE+LL KRV+RG++ + K    L LI PT +  DL GCDL++EAVFENM LKH+IT+E++G +A  G+WGSNTS+LPITQLAEA+ +P NFIGIHFFSPVDKMPLVEIICG +TSD  LAKA+D+ RQIRKTPIVVNDSL
Sbjct:  294 TFFFGMNKVNGGASRPQDVEPQQTKKVGILGAGMMGQGIAYVSAMAGIEVVLKDISQEAADKGKAYSEKLLAKRVERGRMDQAKMDGILGLIKPTADAADLQGCDLVIEAVFENMELKHQITKEMQGYMAEGGIWGSNTSTLPITQLAEAADNPENFIGIHFFSPVDKMPLVEIICGEQTSDVALAKAFDYTRQIRKTPIVVNDSL 499          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107160.1531.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7C1N6_9GAMM8.090e-12190.293-hydroxyacyl-CoA dehydrogenase n=8 Tax=Halieaceae... [more]
A0A2N5Y2T4_9GAMM2.910e-10579.133-hydroxyacyl-CoA dehydrogenase n=1 Tax=Kineobactr... [more]
UPI0019DD3C6B2.610e-10175.73Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
A0A5C8ZXW2_9GAMM4.520e-9773.793-hydroxyacyl-CoA dehydrogenase n=2 Tax=Parahaliea... [more]
A0A5C8ZWK8_9GAMM6.520e-9773.303-hydroxyacyl-CoA dehydrogenase n=1 Tax=Parahaliea... [more]
A0A2D4S9U7_9GAMM1.180e-9674.273-hydroxyacyl-CoA dehydrogenase n=1 Tax=Salinispha... [more]
A0A5S9MZH9_9GAMM1.260e-9672.823-hydroxyacyl-CoA dehydrogenase n=1 Tax=Zhongshani... [more]
A0A395JKG4_9GAMM1.260e-9672.333-hydroxyacyl-CoA dehydrogenase n=1 Tax=Arenicella... [more]
F3L5A1_9GAMM2.130e-9672.823-hydroxyacyl-CoA dehydrogenase n=1 Tax=Aequoribac... [more]
A0A2N5WZQ6_9GAMM6.990e-9671.363-hydroxyacyl-CoA dehydrogenase n=2 Tax=Pseudohali... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107160contigM-pyrifera_M_contig107160:3..620 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score384.4
Seed ortholog evalue3.2e-104
Seed eggNOG ortholog1121937.AUHJ01000005_gene2168
Preferred namefadB
KEGG rclassRC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115
KEGG koko:K01782
KEGG ReactionR01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094
KEGG Pathwayko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212
KEGG ModuleM00032,M00087
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG1024 Enoyl-CoA hydratase carnithine racemase
EggNOG OGs1MU9P@1224,1RMZ8@1236,465MP@72275,COG1024@1,COG1024@2,COG1250@1,COG1250@2
EC1.1.1.35,4.2.1.17,5.1.2.3
COG Functional cat.I
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size618
Cds size603
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.4791465-CDS-M-pyrifera_M_contig107160:2..6051622815581.4791465-CDS-M-pyrifera_M_contig107160:2..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107160 3..605 -
1692277473.6189904-CDS-M-pyrifera_M_contig107160:2..6051692277473.6189904-CDS-M-pyrifera_M_contig107160:2..605Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig107160 3..605 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.491112-UTR-M-pyrifera_M_contig107160:605..6201622815581.491112-UTR-M-pyrifera_M_contig107160:605..620Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig107160 606..620 -
1692277473.6299024-UTR-M-pyrifera_M_contig107160:605..6201692277473.6299024-UTR-M-pyrifera_M_contig107160:605..620Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig107160 606..620 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107160.1531.1prot_M-pyrifera_M_contig107160.1531.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig107160 3..605 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig107160.1531.1

>prot_M-pyrifera_M_contig107160.1531.1 ID=prot_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp
MNRGNRGGSRPQDVPPQQIKKLGVLGAGMMGQGIAYVAAMAGINVVLKDV
SEDAASRGKAYSERLLDKRVQRGKLTEEKKQATLDLILPTVNNDDLAGCD
LIVEAVFENMSLKHKITRELEGQLAADGVWGSNTSSLPITQLAEASASPA
NFIGIHFFSPVDKMPLVEIICGAETSDETLAKAYDFARQIRKTPIVVNDS
L
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mRNA from alignment at M-pyrifera_M_contig107160:3..620-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig107160.1531.1 ID=mRNA_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig107160:3..620- (Macrocystis pyrifera P11B4 male)
ACGTTTTTCTTTGCCATGAACCGGGGCAACCGTGGCGGTAGCCGGCCGCA GGACGTGCCCCCCCAGCAGATCAAGAAGCTGGGCGTACTGGGCGCAGGCA TGATGGGGCAGGGTATTGCCTATGTGGCGGCCATGGCCGGTATCAACGTG GTGCTCAAGGACGTCAGCGAAGATGCCGCCAGTCGTGGCAAGGCATACAG CGAGCGCCTGCTGGACAAGCGCGTGCAGCGCGGCAAGCTCACGGAAGAGA AGAAACAGGCAACCCTCGACCTGATACTGCCGACCGTCAACAATGACGAC CTCGCAGGGTGCGACCTGATCGTGGAAGCGGTCTTCGAGAACATGAGCCT GAAGCACAAGATCACCCGCGAACTGGAAGGGCAGCTCGCAGCCGATGGCG TATGGGGGTCCAACACATCGTCCCTGCCGATTACGCAGCTGGCTGAAGCG AGCGCGAGCCCGGCTAATTTCATCGGTATCCATTTCTTTTCGCCGGTGGA TAAAATGCCTCTGGTGGAGATTATCTGCGGCGCTGAAACGAGCGACGAGA CACTCGCCAAGGCCTACGATTTTGCACGGCAGATCCGCAAGACGCCGATT GTGGTCAACGACTCGTTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig107160:3..620-

>mRNA_M-pyrifera_M_contig107160.1531.1 ID=mRNA_M-pyrifera_M_contig107160.1531.1|Name=mRNA_M-pyrifera_M_contig107160.1531.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig107160:3..620- (Macrocystis pyrifera P11B4 male)
ATGAACCGGGGCAACCGTGGCGGTAGCCGGCCGCAGGACGTGCCCCCCCA
GCAGATCAAGAAGCTGGGCGTACTGGGCGCAGGCATGATGGGGCAGGGTA
TTGCCTATGTGGCGGCCATGGCCGGTATCAACGTGGTGCTCAAGGACGTC
AGCGAAGATGCCGCCAGTCGTGGCAAGGCATACAGCGAGCGCCTGCTGGA
CAAGCGCGTGCAGCGCGGCAAGCTCACGGAAGAGAAGAAACAGGCAACCC
TCGACCTGATACTGCCGACCGTCAACAATGACGACCTCGCAGGGTGCGAC
CTGATCGTGGAAGCGGTCTTCGAGAACATGAGCCTGAAGCACAAGATCAC
CCGCGAACTGGAAGGGCAGCTCGCAGCCGATGGCGTATGGGGGTCCAACA
CATCGTCCCTGCCGATTACGCAGCTGGCTGAAGCGAGCGCGAGCCCGGCT
AATTTCATCGGTATCCATTTCTTTTCGCCGGTGGATAAAATGCCTCTGGT
GGAGATTATCTGCGGCGCTGAAACGAGCGACGAGACACTCGCCAAGGCCT
ACGATTTTGCACGGCAGATCCGCAAGACGCCGATTGTGGTCAACGACTCG
TTGATGAACCGGGGCAACCGTGGCGGTAGCCGGCCGCAGGACGTGCCCCC
CCAGCAGATCAAGAAGCTGGGCGTACTGGGCGCAGGCATGATGGGGCAGG
GTATTGCCTATGTGGCGGCCATGGCCGGTATCAACGTGGTGCTCAAGGAC
GTCAGCGAAGATGCCGCCAGTCGTGGCAAGGCATACAGCGAGCGCCTGCT
GGACAAGCGCGTGCAGCGCGGCAAGCTCACGGAAGAGAAGAAACAGGCAA
CCCTCGACCTGATACTGCCGACCGTCAACAATGACGACCTCGCAGGGTGC
GACCTGATCGTGGAAGCGGTCTTCGAGAACATGAGCCTGAAGCACAAGAT
CACCCGCGAACTGGAAGGGCAGCTCGCAGCCGATGGCGTATGGGGGTCCA
ACACATCGTCCCTGCCGATTACGCAGCTGGCTGAAGCGAGCGCGAGCCCG
GCTAATTTCATCGGTATCCATTTCTTTTCGCCGGTGGATAAAATGCCTCT
GGTGGAGATTATCTGCGGCGCTGAAACGAGCGACGAGACACTCGCCAAGG
CCTACGATTTTGCACGGCAGATCCGCAAGACGCCGATTGTGGTCAACGAC
TCGTTG
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