mRNA_M-pyrifera_M_contig10710.1529.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig10710.1529.1
Unique NamemRNA_M-pyrifera_M_contig10710.1529.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 5.760e-75
Identity = 113/195 (57.95%), Postives = 147/195 (75.38%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            V ++GF+VDGK  DD++ +SYV+KCV VEGT TS ++ LEGFVM+D+ +++CG ECVRLK+F+V A I DN I+ CG+ DF +G  G NGEGIY+GTSS+Q W+ G D  + N I GN I  +G+ECVD+KEGS G  +EENTCS QL+E SGCF  RGD N  R N   DC GVGVR+GG +V+GH+YGQ+N +
Sbjct:   89 VTLEGFSVDGKISDDDEAESYVDKCVFVEGTSTSGDERLEGFVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQ-WSDGPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFRYNTASDCLGVGVRIGGWEVDGHKYGQDNSI 282
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.930e-68
Identity = 108/196 (55.10%), Postives = 146/196 (74.49%), Query Frame = 1 
Query:    1 VQMQGFTVDGK-QDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            + ++GFTV+GK    D  + S+VNKCV VEG G+  +  L+GFVM+DM++++CG ECVRLK+ V+ A++  N I +CG++D+ F  G  NGEG+YIGTSS+Q W +GED  + N + GNRI+T G+ECVD+KEG+ GN IE+N CS+QL+ +SGC+  RGD NT R NVG DC G GVRLGG +V+GHQYG  N V
Sbjct:  115 ITLKGFTVEGKIGTSDTDEASWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQ-WTNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFRYNVGTDCMGAGVRLGGWEVDGHQYGVGNSV 309
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 2.550e-68
Identity = 107/196 (54.59%), Postives = 145/196 (73.98%), Query Frame = 1 
Query:    1 VQMQGFTVDGK-QDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            + ++GF+V+GK   +D  + S+VNKCV VEG G + +  L+GFVM+DM++++CG ECVRLK+ VV A++  N I +CG++D+ F     NGEG+YIGTSS+Q W +GED  +GN +  N I+T G+ECVD+KEGS GN IE+N CSDQL+ +SGC+  RGD NT R NVG +C G GVRLGG +V+GHQYG  N V
Sbjct:  115 ITLKGFSVEGKIGSNDTDQASWVNKCVYVEGPGANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQ-WTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFRYNVGSECTGAGVRLGGWEVDGHQYGVNNSV 309
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 3.990e-57
Identity = 98/196 (50.00%), Postives = 136/196 (69.39%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGE-DRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            ++++GFTV+G+   +  +DSYV  C+ V+G G+  +  L+GFVM++M +++CG ECVRLK+ V  AKI  N I +CG++D+ F  G  NG+G+ IGTSS + W  GE D  + N + GN I T  +ECVDVKEG+YGN IE+N C +QL+  SGC++ RG+ N  RNN G DC G GVRLGG +V+G QYG  N V
Sbjct:   77 IELKGFTVEGQIGTEVTEDSYVLNCIYVQGPGSDSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDE-WPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFRNNAGSDCLGAGVRLGGWEVDGFQYGVGNSV 271
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BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: A0A6H5LEX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEX7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.870e-54
Identity = 90/166 (54.22%), Postives = 123/166 (74.10%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQD-DDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVR 495
            + ++GFTV+GK    D  + S+VNKCV VEG G+  +  L+GFVM+DM++++CG ECVRLK+ VV A++  N I +CG++DF F  G  NGEG+YIGTSS+Q W +GED  + N + GNRI+T G+ECVD+KEG+ GN +E N CSDQL+ +SGC+  RGD NT R
Sbjct:  115 ITLKGFTVEGKVGTSDTDEASWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDFMFNSGDKNGEGVYIGTSSTQ-WTNGEDTCNDNLVFGNRISTSGNECVDIKEGASGNVVENNICSDQLDAESGCYDSRGDGNTFR 279
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.010e-50
Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGT---------GTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQW--------AHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            V ++GFT+DG+ DD++ ++SYV+KC+ VEG          G      L G V+  + I++CG EC+R++NFV  A IQ+N+I +CG+YDF F   G  GE IYIGTSS+Q W         +G D S+ N + GN++   G+ECVD+KEG+  N +E N C DQ + +SGC+  RG+ NT R N    C G G+RLGG  ++G  YG +N V
Sbjct:  115 VTLEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQ-WEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAVQCLGAGIRLGGHTIDGFVYGVDNHV 325
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.680e-47
Identity = 91/212 (42.92%), Postives = 132/212 (62.26%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSEN---------DPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWA--------HGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            V ++GFT+DG+ DD + +DS+V+KC+ VEG    E+           L G V+  M I++CG EC+R++NFV    I DN+I  CG+YD+ +   G  GE IYIGTSS+Q WA        +G D  + N + GN++   G+ECVD+KEG+  N +E N C DQ + +SGC+  RG+ NT R N  ++C G G+RLGG +++G  YG +N V
Sbjct:  161 VTLRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQ-WADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFRYNTAENCLGGGIRLGGHEIDGITYGVDNHV 371
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: A0A261GV77_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GV77_9GAMM)

HSP 1 Score: 160 bits (405), Expect = 1.820e-44
Identity = 83/201 (41.29%), Postives = 123/201 (61.19%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGE------DRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            + ++GFT+DGK  D+   +SY    + V+G         +G  ++ M +++ G ECVR++ FV EA+I  N   +CG+ DF F +G  NGE IY+GT+  Q W +G+      D S  N+I  N   T+G+ECVD+K+GS  N +E N C+ Q +  SG F+++GD N +RNN+     G G+R+GG  VNG+QYG ENDV
Sbjct:  122 IHLRGFTIDGKYADEASPESYRGTLIWVQGIEPMSGP--KGVAIRAMRLRNAGGECVRIRYFVSEAEIFGNTFYNCGVLDFQFNDGTKNGEAIYVGTAPGQ-WGNGKNLTSDPDHSHHNWIHDNSFLTNGNECVDIKDGSEYNLVENNICTGQRDPNSGGFNIQGDRNILRNNISFANNGAGIRIGGHMVNGYQYGVENDV 319
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 6.320e-43
Identity = 83/209 (39.71%), Postives = 122/209 (58.37%), Query Frame = 1 
Query:   16 FTVDGKQDDDNKKDSYVNKCV-------------RVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGE------DRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            FT+DGK      K++Y++KC+             +++  G      + G V+ +M I +CG ECVR++ FV  +++ +N I +CG +DF    G  NGEGIY+GTSS+Q W  G+      D SS N+   N   T G+E +D+KEGS  N +E+N C+ Q +  S C   RGD+N  R N  +D  G G+R+GG K++GHQYGQ N+V
Sbjct:  111 FTIDGKH----SKNNYIDKCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGIYLGTSSNQ-WDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEV 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Match: UPI001F2919BD (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Rhizobium mesoamericanum TaxID=1079800 RepID=UPI001F2919BD)

HSP 1 Score: 152 bits (385), Expect = 2.380e-42
Identity = 89/200 (44.50%), Postives = 119/200 (59.50%), Query Frame = 1 
Query:    1 VQMQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHCGTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQWAHGE-----DRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKSGCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV 585
            V+++GFTVDGK    N K SY +K + V   G +  D + G  + +M +K+ G EC+RL+      +I  + I +CG YDFAF +GG NGEGIYIGT+  Q+ AHG      D S  N+I  N I T G+ECVD+KEGS  N +E N CS Q ++ SG F  RG+ N  R N   + +G GVRLGG     ++ G  NDV
Sbjct:   44 VELRGFTVDGKFGAGNTKGSYRDKLIYV--IGKTPGDGVTGLRILNMSVKNAGGECIRLRYQTRRNEIAYSQISNCGRYDFAFRDGGKNGEGIYIGTAPEQRGAHGAPDRSVDASDANHIHHNVIDTRGNECVDIKEGSSHNVVEHNQCSGQQDKNSGGFDSRGNNNVFRYNTVSNVRGAGVRLGGDS---NRDGINNDV 238
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10710.1529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT05_9PHAE5.760e-7557.95Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
D7FXR8_ECTSI1.930e-6855.10FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FXR9_ECTSI2.550e-6854.59FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FZD2_ECTSI3.990e-5750.00FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5LEX7_9PHAE1.870e-5454.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1D2_9PHAE1.010e-5043.87Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D8LJ42_ECTSI1.680e-4742.92FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A261GV77_9GAMM1.820e-4441.29DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]
D7G3L7_ECTSI6.320e-4339.71FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
UPI001F2919BD2.380e-4244.50right-handed parallel beta-helix repeat-containing... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10710contigM-pyrifera_M_contig10710:589..7161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score167.9
Seed ortholog evalue4.5e-39
Seed eggNOG ortholog1121935.AQXX01000136_gene4114
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Parallel beta-helix repeats
EggNOG OGs1NHJ7@1224,1SHNB@1236,COG3420@1,COG3420@2
COG Functional cat.P
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons4
Model size585
Cds size579
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10710.1529.1prot_M-pyrifera_M_contig10710.1529.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig10710 595..7161 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.3730912-UTR-M-pyrifera_M_contig10710:588..5941622815581.3730912-UTR-M-pyrifera_M_contig10710:588..594Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10710 589..594 +
1692277473.552454-UTR-M-pyrifera_M_contig10710:588..5941692277473.552454-UTR-M-pyrifera_M_contig10710:588..594Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig10710 589..594 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815581.3835735-CDS-M-pyrifera_M_contig10710:594..7461622815581.3835735-CDS-M-pyrifera_M_contig10710:594..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 595..746 +
1692277473.5632029-CDS-M-pyrifera_M_contig10710:594..7461692277473.5632029-CDS-M-pyrifera_M_contig10710:594..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 595..746 +
1622815581.3931072-CDS-M-pyrifera_M_contig10710:3203..33481622815581.3931072-CDS-M-pyrifera_M_contig10710:3203..3348Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 3204..3348 +
1692277473.5726926-CDS-M-pyrifera_M_contig10710:3203..33481692277473.5726926-CDS-M-pyrifera_M_contig10710:3203..3348Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 3204..3348 +
1622815581.401707-CDS-M-pyrifera_M_contig10710:5661..58521622815581.401707-CDS-M-pyrifera_M_contig10710:5661..5852Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 5662..5852 +
1692277473.5817842-CDS-M-pyrifera_M_contig10710:5661..58521692277473.5817842-CDS-M-pyrifera_M_contig10710:5661..5852Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 5662..5852 +
1622815581.4163935-CDS-M-pyrifera_M_contig10710:7070..71611622815581.4163935-CDS-M-pyrifera_M_contig10710:7070..7161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 7071..7161 +
1692277473.6008587-CDS-M-pyrifera_M_contig10710:7070..71611692277473.6008587-CDS-M-pyrifera_M_contig10710:7070..7161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig10710 7071..7161 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig10710.1529.1

>prot_M-pyrifera_M_contig10710.1529.1 ID=prot_M-pyrifera_M_contig10710.1529.1|Name=mRNA_M-pyrifera_M_contig10710.1529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
MQGFTVDGKQDDDNKKDSYVNKCVRVEGTGTSENDPLEGFVMKDMMIKHC
GTECVRLKNFVVEAKIQDNNIRHCGMYDFAFGEGGFNGEGIYIGTSSSQQ
WAHGEDRSSGNYIKGNRIATHGSECVDVKEGSYGNTIEENTCSDQLEEKS
GCFSVRGDANTVRNNVGKDCKGVGVRLGGSKVNGHQYGQENDV
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mRNA from alignment at M-pyrifera_M_contig10710:589..7161+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig10710.1529.1 ID=mRNA_M-pyrifera_M_contig10710.1529.1|Name=mRNA_M-pyrifera_M_contig10710.1529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6573bp|location=Sequence derived from alignment at M-pyrifera_M_contig10710:589..7161+ (Macrocystis pyrifera P11B4 male)
GTTCAAATGCAGGGGTTCACAGTGGATGGAAAACAAGACGACGACAACAA
GAAAGACTCATACGTCAACAAGTGCGTTCGAGTAGAGGGCACGGGCACCA
GCGAAAACGACCCGCTGGAGGGTTTCGTGATGAAGGACATGATGATCAAG
CACTGCGGGTGAGCTGTCGCGGCTGTCTCGACGCTTGAAAGCCTGACGAC
CTGGTAAGCCATGCATACAGACGACCTGGTATCTGCGCGGCCTCGGTGGA
GCATGAGCGGCCGGGATCTGTCGCCCGGCGTGTTTGGAAACGAGAAGGAG
GCGAAAAATGTTCTTCGTTCGTTTCTTTTCGTGTGGCGACGAGACTCATT
GAGTACAAAACGCCGAAATAAGCTGACGAGCCGAATTCCTTAGCGCAATC
CAATCTCGACTCCCTGTGCAGTACACTAATCGAGAACCGGGACGGCTGAA
CCCCGTGTGCGACGAAATTTCAAGAATTTCCCCGCGGTCGGAAGTCACAC
TCCTGTGCACACGGCTTGGGAAACTGCTCGTTCGACGTGAACGTTCATCA
CGATGAGAGATGGACAGAAACCAATTATCGGTACACAACGAAGCCACAAG
TCCCTGAGTTGAGGAGCTGCGTAGTGCGAGGGCATTTTTGTCGCCGACGG
TCGGTTAGCGATCACGCGCGTATTTTTATTGACGGCTCGAAAATATTTCG
CATTCACACCTGACTACCTCGTGTACACTAGTGCGTGTCGCGACGACCTA
TGGACCTGTAGTACAACCTCCTACGAGTGGGCTGGAAAGTAAAAGTGATG
AACAAAAAAAAAAAAAGGAAAAAAGTACATCTAGCAGTGTGGTACGCGGC
GTTTCTGCCGACCCCCCCCCCTCTGCTGCAAATGTACTGTACGGGAGTCT
GCCGTTGAATATCGCGACGAAAATCTAGTGAACACCAGGCAGCGATTTGT
CTGACTGTACCCTCGACCCTTACGCGGAGACAGTGTCCGGTAGTATGTCC
CCTGTAAAATACGGGCATGAACTACGTGCCCGTGAAGACGTCGAACAATG
CAGAAAAAAAACCCACAACGTGTCGCGAATTTATTGATTGGGTACGCGTT
TAACGGATTGGTACGTTGTCCGATGCCCTCGTAAACAAATGTATACGAGG
CCCCCATTCTTGTGCGCAGGAACTGCCAACAGTAAATTGGTGACTGTACG
GTTGTTGCGAATCATATTTGGTGGAGCCATGGGGCGTTCTACGATCGATG
TAACACTTGACGAGCCACCATGGCGCCATTTCCGGCCACCGCGTGAAGGA
TGACTCTGAAAACTTTGCTCTTGATAATGTTGGGCATAATGCCCACGTTC
ACGTCTTATGAGAGGCGTGCCGCACCAGGACCCTTCATGCGATTGTCCCC
GTCGTCGAACGCCGCATGATGCTTTAGGGGGACATGCTGTAAGAGCCTCA
AAACGATAGCATTGAACTTCATATCGTAGAACACTTCGCATGCTACGGCA
GGATTGCTGGCGCGTATGGTATAACCGGGACCCTTATTCCCCTAGAATGC
CTCTAAAACCTGAGGAGCTCCGCACCTCCCCCAAACCCGGGTTTTGAGCA
AACCGACACGGAGGTCTAAGTGCGACCTAGATGCTGTACGAAATAGGCGA
CGAACAGAGTCCAGAGCAACAATTGGCGTAGGAAACCTTTTCAGTCAGAA
ACAATACACTGTTGAAAACAAATGCTACGACATTCGGCGTAGCACGCATC
TGTGACCTACTTTTTTTCTTCTTTTTTCATGACGTCCTAGCGTTCGCAGC
TCTTCCTTGTGCCTACGCTAATATGACTGTGAGAAATGATCGATTTAGGG
AGGTATCTTACGGTATAGATGTAAAAATGGACGCGCTAACAATATGTTTG
TGATTGATAGGAAGTTGACTAAATGGGCTGCATTGCCGACATCGTTTCGT
TAGACTTTTCACCTGAATGATACCGAGACCTAACCCATGGCGTCACTGGG
GTTGGTATCATATTTTTTTCTCAGAAATGAGAGAGCTCCCCACGCGAGGA
GTGCCTCATTACATGTCGGGTGCACCCCTGACGTGTGCTACCGTAAAAAC
GCCAGCATATTATTGTCGGAGGCTCTGAACCTAAGTGGTTCCCCAAACAG
ATGTTTGTGCGAAAACCGAAACGGACGCTTTAGCTCATCGTAGGTGCTGT
TCGAAAAGTATTCCAGGAAATATCTGCATTGACGACATTTTTCTTGTTCT
AAAGTCTGAGGATCCCCGTCAGTCGAAACCAAGAATGTCGAACAAAATTC
TACCCATGACGTGACATCTATCATGAAGTTACTGTGTGCCATGGGGTTGA
GCTCATCGGGACACACGTACACTTTCTGTATACTTGAAGTGTCAGATGTC
TTTGAGAATAGGAGCCTCAAGCGCTGGCTGGTGTGCACCTGCACCGCATC
ATGGGTCAGGATGCTGCTGCTACGCTAGTAGCTTGCTTGTCCAATACACG
TGCGTGATGGCATACAGCCGTAGTCGACCCCGTCCTAAGCTAAACCGCCC
GTTCGTTCCTACTACCGACCGCAAATGTATGTTTTATCCACCCACCCGCA
CGTGGTCGAGGGCAGGACGGAGTGCGTGCGGCTGAAGAACTTTGTTGTCG
AGGCCAAAATCCAAGACAACAATATAAGACACTGCGGCATGTACGACTTC
GCTTTTGGCGAAGGAGGGTTTAATGGGGAAGGCATATATATCGGCACCTC
GAGCTCACAGGTTGGAAGGCAGCGGTGTATAGCGGGTATAGCGGAGAGAG
GGGGGGGCAGGGGGCGTCACACGGTTTAGGCCAGACGCTTCTCGCAGGGT
GAGGACATCCCAAACATGTTTGCAAAATGTCACCGATGTTGTTAGTCCAA
TCTCCTCCTCGCTTTAGCTTCCTTTCCATCCGAGCCTGTACCCTTCGGGG
TGATGCCTCTACCACGACAGTGGCAGCATCGTTAAATGCAAAAGTCAGTT
TGGTGCAACATTCAGGTTCGGACTAAACTGGATAATCCGCAACTGGGCAA
CTACCCAATCTCCTGAACTTGGGACGTGTGATGCATATATGTTGGGGAAA
TGTAGCGTAAGGCCTCACAAAGCTGTCGGGTTGACTGTTCACATTTTTCG
TGAGGGTCGGGCATTGTGTAGGGGCGACCTCTTCGAGGGAATGGAGATTC
TAGAAAATACTGATCGACCCTTATCGTAGCATGTATCATGTCCCACGAGA
TATGGGTGGTTGTTTTGATCCTCCGGCGCAACAATTCCTGACCGATCACG
CTCGTGAATCAACCAGTTTGGTTTTTTGGTGTGGAGTCTTTGGTTAGGAA
CCATACACATTTATATCACATGTTTGTCGGATGGCGTCGAAAAAAGAACT
CTCTCTCCTCAATGGCATGCTTCGGGTGTAGGTGTTGACCTTCCCATATC
GGTATATCGGCATTACGGTGCAGCTGAATCGCGGCACAGCTCCAAAACGA
ACATACACCCGATCGCTTGTTGAGGGCGTGTACACCTTTTTATAGGTAGT
GGGAAAACCGCCTACTCTACACGAAAATCCTTGGACACGACGCGTCGTTC
GTTGATGCAACGTCTGCTACGGTACAAATCACTTTCGTTTGAATATATTG
CAAAACCTTGATCATTTACGCCGCACAAACTTATCAACAAAACCTGTTGT
TTTGGGTGAGTGCTGCTGCTGTGGGTGGTGTCGCCGCTGTGCTTCCGATT
TGACAAAACATGAGCAAGGAGTCATATATATCTCAACGACTTCCCTAACG
TATAACCCGCATTGGACGCCGTCGACGCCCTGGCGACGCTCGATGGAACC
GAAAAATGGTTTGAAAACAGAATTTTGACTCGGACGAAGCAATACCTGAT
CGCTGCTGCTGTTGCCGTTGCTGTGGTACGTTGAGCACCGCTCGTACAGA
CAGAAACCCACGACCGCCAAGCAAGCATTATCATCGTTTCTACAACGCCT
GCTGTTTGTCCAAGGGAGACCAACGGGCGAGCGACCAGGCACTGTTTGCT
CTCCGCCACAGATTTGGTCTGTGTGGTGCTTAGCACGACGTGGTACGTCG
AGTACGTGAACAGGCACTGCATACGGCCAGTAACATGTAGATGTGCGTCC
AGTTGTGGGTGACGTCGACGAGGGTTCCTCACAATGGATCTAGTCTTGTA
CGGTTTTAGGTCGTGAGGCGTTTGACTCAGGTCCTCTGAACCTGTCCTTC
CGATAGGCGCTACGTCTGCCTGCCCGCCCTTCTCGGCATCACAGGCGTTG
GCCACGCGCTCTCCCGCACTGACCACGCGAACCAGAAATATCCTGTGCAG
CAGGACTCCTGATGTTTATTGCCTGTTTCACGTGCGACTCTCGTTCGTGC
AGCTCGTCTTAGGACAACCGCACCGCTCACCATCCATCAACGCACACAGG
GCAATGGCAGCTACAAATATTCGTTTGCGCGTGGTCCATGCGACATCTAT
GACTAAGTGCGCGATAGCACCTATGAACGCCATGGAAATATCCCGACGGC
GTTAAACTTACGTATTTGACAAACGTCATTTGTCCGTTGGGCAAGGAACC
CCAAGAGTGATTGGCCTCTACAAAACGATGTCGGTGTCCTCCTTCGTCGG
CATTCTTTCTCGGGAATCAAGCTGCAACTCCGTGTCGGAGAAAACCTACA
TACTGACACCCTTGTCCTCCGGTGGTCTCTAGGTGTGTTGCTCTTGTCGA
GGCGTTCAACGATAGAGGTATCACTTTCAGGAAAAGCAGAGACACCAAAC
GGCTTTGCCGGGCGCTAGTACATACATGAGTTTGTCATTTGTTCCCTACA
TTGCTGGGCACACGCGGACGAGGCGCGTGTAGTATCGGTCTCATTCACGT
GTCTATCCTCGTTAAATTCCGCATTGGACATAGAAGCCTAAGGGAATAAA
AGGCGAACCTCTATGCGTGAACGCCTCTGTCGATTGCTGAAACTCCTTGT
CGTACGTGGATGACCGAAAACACCCCATCGTTTTGTCGCGCTTGTTTTGC
CGCATCGGATATACGCCGGGAAGCAGTGGGCCCATGGAGAAGACCGCAGC
AGCGGCAACTACATAAAGGGAAACAGGATCGCAACGCACGGCAGCGAGTG
CGTTGACGTGAAGGAGGGGTCCTACGGCAACACTATCGAGGAAAACACCT
GCTCCGACCAGCTCGAGGAGAAGTCGGGGTGTTTCAGCGTCAGGGGCGAC
GCCAACACAGTGAGGTACGTTTCGGGTGAGAAGCAGCACGCTTGTTCTGA
CAGGGTTTCATGCCGATGTCTGAGATAATATATTCCATGCTCAGGTACGG
TACTTTGAGAAAGACGCGTGGTACGGTAGCGCTATCAACCGATTTTTCTG
AGGCTTCTCACTTGATGAGGCACATTCTACGATAGAGGCAGAATTTTTCC
CAAAATTCGTTTGTGAATGACGGCTCTCCTTAACCCCAAATCTTCGGAAT
GCCAACCCTGTTTCGAAAGCGACGTTTTCGTATACTTCGGCCATGTGATT
ATTATTCGAGATGCACAATGATTTTCGGAGTTTCTTAAGTGAAGAGCCTC
AGCCAATTTCGGCCGAACCTCTAACGTATAACGCCTGATGAGCTCTGAAC
CCCAGTCAAAACGTGATATTGAAGACCGCTATAAGTGACACCCCTGGAAA
AATCAGAAAACCTACGTATACAACGAAAAATATTGTAAAAACCACAAGTG
CCTCGAAGTACAGACCACAACAAAACAGCCGTATAGACAGAGGAAGAGCC
TGGGCGTCATGGGACGTGCCAACGCGATTAGGTTTGTATGTATTTGTCTT
GACCAGCAGACGGTAGCCTGAACCTCTTGTTAAATCGTGGCCCCGAATAA
CCACCACGCGGTATCGATTAAGATTTTTTTTCTTTTTAGGTTCATCCCTG
AAAGCATCACTTATTCTAATATAACTTGCACTTTGGGTCTACATCGAATC
TAAGACCTCTCTTCACCGCTTCGATAATTTGGGGTAACGTTGTTTGCGTT
TTTGGAATGAAGTCGCTTGTATTCTTTATGTTTCCACCCAACGTATAATC
GTTTTTGGTTCTTCTTTGCTTTCTCCCTTGGATTGGGCCCAGAATGCTGC
ACTATCTCAACACCATCAACGTAACGCCATAGGCGCCCCTTCCTGTGTTC
CCGGCATGCCTTCCAGCGACGATGGCCCAGGCATGGTATATATACACCAT
CGGCCACTAGATGTCTGATGATCGGTACAGGGATGGTCACGAGTGAAAGC
AACTGCGGTATAATATTAAGGGCACGCGATTCGTGTTAGTTCGCTACAAA
ATAGCGAAGGCACGCAGAAAACTGGTAATTTTCCTGAACGTATTCACAGG
AAAAGTGGAACACCACCAAGAACAACAGACACAGCTTAACGTGCCCATTT
TCCTTCGATCCTCTTGCTGATTTCCCGTGCAGAAACAACGTCGGGAAGGA
TTGTAAGGGTGTCGGCGTGCGGTTGGGAGGATCGAAGGTCAATGGCCACC
AATACGGCCAGGAAAACGATGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig10710:589..7161+

>mRNA_M-pyrifera_M_contig10710.1529.1 ID=mRNA_M-pyrifera_M_contig10710.1529.1|Name=mRNA_M-pyrifera_M_contig10710.1529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig10710:589..7161+ (Macrocystis pyrifera P11B4 male)
ATGCAGGGGTTCACAGTGGATGGAAAACAAGACGACGACAACAAGAAAGA
CTCATACGTCAACAAGTGCGTTCGAGTAGAGGGCACGGGCACCAGCGAAA
ACGACCCGCTGGAGGGTTTCGTGATGAAGGACATGATGATCAAGCACTGC
GGATGCAGGGGTTCACAGTGGATGGAAAACAAGACGACGACAACAAGAAA
GACTCATACGTCAACAAGTGCGTTCGAGTAGAGGGCACGGGCACCAGCGA
AAACGACCCGCTGGAGGGTTTCGTGATGAAGGACATGATGATCAAGCACT
GCGGGACGGAGTGCGTGCGGCTGAAGAACTTTGTTGTCGAGGCCAAAATC
CAAGACAACAATATAAGACACTGCGGCATGTACGACTTCGCTTTTGGCGA
AGGAGGGTTTAATGGGGAAGGCATATATATCGGCACCTCGAGCTCACAGG
ACGGAGTGCGTGCGGCTGAAGAACTTTGTTGTCGAGGCCAAAATCCAAGA
CAACAATATAAGACACTGCGGCATGTACGACTTCGCTTTTGGCGAAGGAG
GGTTTAATGGGGAAGGCATATATATCGGCACCTCGAGCTCACAGCAGTGG
GCCCATGGAGAAGACCGCAGCAGCGGCAACTACATAAAGGGAAACAGGAT
CGCAACGCACGGCAGCGAGTGCGTTGACGTGAAGGAGGGGTCCTACGGCA
ACACTATCGAGGAAAACACCTGCTCCGACCAGCTCGAGGAGAAGTCGGGG
TGTTTCAGCGTCAGGGGCGACGCCAACACAGTGAGCAGTGGGCCCATGGA
GAAGACCGCAGCAGCGGCAACTACATAAAGGGAAACAGGATCGCAACGCA
CGGCAGCGAGTGCGTTGACGTGAAGGAGGGGTCCTACGGCAACACTATCG
AGGAAAACACCTGCTCCGACCAGCTCGAGGAGAAGTCGGGGTGTTTCAGC
GTCAGGGGCGACGCCAACACAGTGAGAAACAACGTCGGGAAGGATTGTAA
GGGTGTCGGCGTGCGGTTGGGAGGATCGAAGGTCAATGGCCACCAATACG
GCCAGGAAAACGATGTGAAACAACGTCGGGAAGGATTGTAAGGGTGTCGG
CGTGCGGTTGGGAGGATCGAAGGTCAATGGCCACCAATACGGCCAGGAAA
ACGATGTG
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