mRNA_M-pyrifera_M_contig107078.1520.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A5A8CCB5_CAFRO (Kri1_C domain-containing protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8CCB5_CAFRO) HSP 1 Score: 111 bits (278), Expect = 4.480e-25 Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLL--AEEDSDRESG----DDGSSSEEEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXX------------RVGRRSEAGLRALAYDEEQRKLRAAFLESAKKSFGA 549 L V+K+FA+++D SRRRR+LARARE G+L AE R G DD S EDEG V TD+++MR+I IR +DP++Y+ WF E+DA+G V+ EAG +R DV+R+QVV+A+ EG+ AF ++ R+ SEA R + Y+EEQ +R AFLE+ ++S A Sbjct: 24 LRVNKQFAEHFDASRRRRDLARAREQGMLHEAERRIARMDGVAADDDDSDESSEDEGHVEPATDMRIMRVIQAIRNKDPKVYEDGVAWFKEDDALGKPDVD-----EAGHTRQRPADVIREQVVKAVREGRSDAFGDDDGPERPTGKGDGEDSDSGDEGTGNRLAAASEAAKRKV-YNEEQAAMRQAFLEAVRESADA 215
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A812VPQ9_9DINO (KRI1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VPQ9_9DINO) HSP 1 Score: 82.4 bits (202), Expect = 1.190e-15 Identity = 76/196 (38.78%), Postives = 109/196 (55.61%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAV-PLETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMG-------DVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKKSF--GAGGGDDE 567 L V+++FA+ ++ +R++ELA+ARE GL+ + + ++ D+ SS E+D+GA+ ETDL +++ + IR ++P IY + WF E D +E E EA KR DV+ QV A GK FDEE XXXXXXXXXX + YDEEQ++LR FL+S KK +G DDE Sbjct: 16 LRVNERFAEDFERRKRKQELAKAREAGLIDADGNIIQASDESSSESEDDDGALLSPETDLHIIKTLEAIRSKNPAIYKKDQAWFTEGDDSS-----DEAEGEANTAGKRQSRKKVTARDVIGQQVAEAAALGKSEVFDEEGEXXXXXXXXXXXXAPVN-------MYDEEQKRLREEFLKSVKKEAEDDSGSSDDE 199
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A7S2CHA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHA4_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.450e-12 Identity = 63/186 (33.87%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPL-ETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKKSFGAGGGDD 564 + V++ +A+ Y+ S+RR ELA LL + DSD D+ SSE EDE + D ++ + I IR RDP +Y+ +A+WFDEN A G + ++ K DV+R+QV+ E A E SE G + AYD+EQR LR AFL + + GG+D Sbjct: 19 IQVNQAYAERYERSKRRTELANQDTKNLLRQVDSD----DESESSESEDEAVLADGRIDCQIAKTIESIRNRDPEVYNPDAQWFDEN-AEGSDDESDRKPRDQKKQKKFFKDVIREQVLEDAETLGHAAPGEMTTGTHDKNE--------SETG-KITAYDDEQRGLRQAFLTADDSDASSSGGED 190
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A7S2G327_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G327_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 3.890e-12 Identity = 63/186 (33.87%), Postives = 91/186 (48.92%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPL-ETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKKSFGAGGGDD 564 + V++ +A+ Y+ S+RR ELA LL + DSD D+ SSE EDE + D ++ + I IR RDP +Y+ +A+WFDEN A G + ++ K DV+R+QV+ E A E SE G + AYD+EQR LR AFL + + GG+D Sbjct: 19 IQVNQAYAERYERSKRRTELANQDTKNLLRQVDSD----DESESSESEDEAVLADGRIDCQIAKTIESIRNRDPEVYNPDAQWFDEN-AEGSDDESDRKPRDQKKQKKFFKDVIREQVLEDAETLGHAAPGEMTTGTHDKNE--------SETG-KITAYDDEQRGLRQAFLTADDSDASSSGGED 190
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A7S2VCY1_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VCY1_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.010e-11 Identity = 64/181 (35.36%), Postives = 94/181 (51.93%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFD----ENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKE-VAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKK 537 L+++KKFA YD +++ EL AR G EEDS+ DD + E+ D L+TD+ M+ ++ +R +D IY+ R+FD D G + E G K+ KR DVVR+Q++ ME+G +A D + + RSE LAYD+EQR++R AFL S K Sbjct: 21 LLINKKFAKEYDARKQKLELRTARLRGEAPEEDSE----DDETEDEDGDLLTTRLDTDI--MKTLNALRSKDETIYNPETRFFDGTKPSEDDEGEDSDEELGRKDK---PKRYKDVVREQILEEMEKGTSAIAHDGDNDDKDEGK----KQSYRSE-----LAYDDEQREIRKAFLSSTTK 183
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: B7FUH6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUH6_PHATC) HSP 1 Score: 67.0 bits (162), Expect = 1.320e-9 Identity = 55/185 (29.73%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 16 VDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKKSFGAGGGDDEE 570 V+ K+A Y++ +++ EL R + G D + G+ SSE+ED + + D +++ I+++R +D RIYD + +FD + ++ KE+ KR DVVR+Q+++ M+E +V EE S+ LAYD Q++LR AF++S G G DD E Sbjct: 26 VNTKYAKEYESRKQKEELRRVQFQG-------DDDDGESTDSSEDEDAELLTAKLDTNIIKTINILRSKDSRIYDPSVNFFDNAEDSEEDSLPT---KESKSKPKRYKDVVREQILKQMDE--DVPIGEENDNDYGVLA--------SDEAKSRLAYDNRQQELRKAFVDSTTGKKGYGIDDDGE 190
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A1E7EVN5_9STRA (Krr1-domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVN5_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 2.780e-8 Identity = 45/130 (34.62%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 184 LKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFL-ESAKKSFGAGGGDDEE 570 ++ ++ I +RK+D +IYD N+R+FD+++ G +N+G+ E KR DVVR+Q++ ME DEE + S+ L YDE+Q KLR AFL ES++K+ G +D+E Sbjct: 70 VQFLKTIKALRKKDDKIYDPNSRFFDDDNYNAVGDDKNDGDTEKKQKPKRYKDVVREQILEQME-------DEENEGGNKKTNTNVDM---SDDHRSKLGYDEQQNKLRKAFLTESSEKTDGEKSDEDDE 189
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A4D9CR12_9STRA (Kri1_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CR12_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.270e-7 Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGD-DGSSSE--------EEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAMEEGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESA 531 L V++ +A ++++S++++ELA+ R ++ SD S + +G S+ E E P +++++R I+ IR+RDP+IY + +WF + E + + G KR DV+R+QV+ A+E KE E R G + + YD EQ +LR AFLE+A Sbjct: 27 LRVNRVYASHFESSKKKQELAQLRRQQHVSWGASDIVSDEGEGEGSDVSXXXXXXXEGEELTPA-MEVQILRTINSIRERDPKIYQHDMKWFSNGEDE---EAEGKEGRRKGERPKRYKDVIREQVLAAVEADKEAIESSEEEDLDKSGAGGERGG--EPVSSQRMGYDAEQLQLRQAFLEAA 203
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: B8C2I4_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2I4_THAPS) HSP 1 Score: 56.2 bits (134), Expect = 6.120e-6 Identity = 51/179 (28.49%), Postives = 83/179 (46.37%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFDENDAMGPGAVENEGEKEAGGDSKRMGDVVRDQVVRAME--EGKEVAFDEEXXXXXXXXXXXXRVGRRSEAGLRALAYDEEQRKLRAAFLESAKKS 540 + +++K+A Y+ +RR EL R + EED +S E E P D+K+++ + ++ +D IYD N +F +ND+ E K KR D+VR+Q++ ME EGK++ ++ LAYD+EQR +R AFL+S + S Sbjct: 50 ININQKYAREYEVRKRREELQNNRNIN---EEDGISDSXXXXXXXXXEAELLTP-HMDVKIIKTLRALKSKDEGIYDQNVAFFSDNDSESGDDDETGDGKRDKTKPKRYKDLVREQILEQMESGEGKDLGDTDKAQGPEAHN----------------LAYDQEQRDIRRAFLDSTRDS 208
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Match: A0A5J4W9V9_9EUKA (Putative krr family protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4W9V9_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 6.360e-6 Identity = 30/84 (35.71%), Postives = 52/84 (61.90%), Query Frame = 1 Query: 10 LVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEEDEGAVPLETDLKMMRLISMIRKRDPRIYDANARWFD 261 + +++++A ++ +R+ +LARA + GLL E D +EE++ V E DL+++ +I IRK+DP IYD NA++FD Sbjct: 169 MNINQEYARKFEERKRKEDLARAADRGLLDE---------DSEQTEEDEAEDVNPEVDLQILDVIQRIRKKDPSIYDPNAKFFD 243 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107078.1520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig107078.1520.1 >prot_M-pyrifera_M_contig107078.1520.1 ID=prot_M-pyrifera_M_contig107078.1520.1|Name=mRNA_M-pyrifera_M_contig107078.1520.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp MGGLVVDKKFADYYDTSRRRRELARARELGLLAEEDSDRESGDDGSSSEEback to top mRNA from alignment at M-pyrifera_M_contig107078:22..591- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig107078.1520.1 ID=mRNA_M-pyrifera_M_contig107078.1520.1|Name=mRNA_M-pyrifera_M_contig107078.1520.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig107078:22..591- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig107078:22..591- >mRNA_M-pyrifera_M_contig107078.1520.1 ID=mRNA_M-pyrifera_M_contig107078.1520.1|Name=mRNA_M-pyrifera_M_contig107078.1520.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig107078:22..591- (Macrocystis pyrifera P11B4 male)back to top |